Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s80.

Sample reads: 391,640. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 14480.94 36975.13 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 6024.05 15381.60 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. HIST1H4C ENSG00000197061 5518.89 14091.74 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
4. RPS27 ENSG00000177954 4899.15 12509.32 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
5. RPS12 ENSG00000112306 4345.62 11095.96 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
6. SFRP1 ENSG00000104332 3553.28 9072.82 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
7. RPL5 ENSG00000122406 2830.12 7226.33 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
8. RPL15 ENSG00000174748 2799.62 7148.45 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
9. RPL31 ENSG00000071082 2784.00 7108.57 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
10. RPL37 ENSG00000145592 2769.12 7070.58 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
11. RPL10A ENSG00000198755 2666.45 6808.42 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
12. PTMA ENSG00000187514 2563.03 6544.35 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
13. RPS23 ENSG00000186468 2370.34 6052.34 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
14. RPS6 ENSG00000137154 2317.52 5917.48 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
15. RPS15A ENSG00000134419 2280.32 5822.49 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
16. RPL7A ENSG00000148303, ENSG00000280858 2159.79 5514.73 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
17. RPL34 ENSG00000109475 2135.98 5453.94 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
18. RPS20 ENSG00000008988 2130.03 5438.74 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
19. TPT1 ENSG00000133112 2065.30 5273.47 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
20. COL3A1 ENSG00000168542 1958.17 4999.92 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
21. GNAS ENSG00000087460 1942.55 4960.04 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
22. PPIA ENSG00000196262 1924.69 4914.44 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
23. RPL23 ENSG00000125691 1883.77 4809.95 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
24. RPS3A ENSG00000145425 1773.66 4528.80 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
25. RPS2 ENSG00000140988 1740.18 4443.32 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
26. RPS29 ENSG00000213741 1717.12 4384.43 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
27. ACTG1 ENSG00000184009 1704.47 4352.13 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
28. RPS16 ENSG00000105193 1702.98 4348.33 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
29. TUBA1B ENSG00000123416 1696.29 4331.25 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
30. ACTB ENSG00000075624 1644.21 4198.27 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
31. RPS27A ENSG00000143947 1592.87 4067.18 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
32. RPL18A ENSG00000105640 1505.08 3843.02 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
33. RPL9 ENSG00000163682 1479.79 3778.44 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
34. RPL30 ENSG00000156482 1467.88 3748.03 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
35. RPL11 ENSG00000142676 1459.70 3727.15 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
36. MDK ENSG00000110492 1456.72 3719.54 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
37. RPL35 ENSG00000136942 1441.84 3681.54 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
38. RPS13 ENSG00000110700 1425.48 3639.77 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
39. RPL13AP20 ENSG00000234498 1406.13 3590.36 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
40. RPS7 ENSG00000171863 1334.71 3408.00 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
41. RPS11 ENSG00000142534 1330.25 3396.61 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
42. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1325.04 3383.31 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
43. RPL10 ENSG00000147403 1270.73 3244.64 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
44. TMSB4X ENSG00000205542 1235.76 3155.35 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
45. RPLP0 ENSG00000089157 1210.47 3090.77 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
46. RPS5 ENSG00000083845 1206.75 3081.27 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
47. SPINK1 ENSG00000164266 1162.85 2969.18 serine peptidase inhibitor, Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]
48. RPL13 ENSG00000167526 1152.43 2942.57 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
49. MTRNR2L8 ENSG00000255823 1130.11 2885.58 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
50. HNRNPC ENSG00000092199 1110.03 2834.31 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
51. H2AFZ ENSG00000164032 1057.95 2701.33 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
52. RPS8 ENSG00000142937 1043.81 2665.23 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
53. NPM1 ENSG00000181163 1035.63 2644.34 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
54. HBE1 ENSG00000213931 1034.14 2640.54 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
55. MALAT1 ENSG00000251562 1010.33 2579.74 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
56. RPS28 ENSG00000233927 996.94 2545.55 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
57. RPL26 ENSG00000161970 994.71 2539.86 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
58. HSP90AB1 ENSG00000096384 989.50 2526.56 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
59. RPL35A ENSG00000182899 986.53 2518.97 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
60. UBB ENSG00000170315 920.31 2349.89 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
61. HMGB1 ENSG00000189403 903.94 2308.09 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
62. RPS25 ENSG00000118181, ENSG00000280831 820.62 2095.34 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
63. COX7A2 ENSG00000112695 816.90 2085.84 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
64. FAU ENSG00000149806 810.20 2068.74 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
65. RPL32 ENSG00000144713 798.30 2038.35 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
66. RPL39 ENSG00000198918 787.14 2009.86 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
67. GAPDH ENSG00000111640 780.44 1992.75 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
68. NGFRAP1 NGFRAP1 778.21 1987.05
69. COL1A1 ENSG00000108821 773.00 1973.75 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
70. HMGA2 ENSG00000149948 754.40 1926.26 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
71. SRP14 ENSG00000140319 738.03 1884.46 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
72. DLK1 ENSG00000185559 735.06 1876.88 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
73. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 723.15 1846.47 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
74. RPS14 ENSG00000164587 718.69 1835.08 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
75. RPS19 ENSG00000105372 703.07 1795.19 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
76. RPS21 ENSG00000171858 702.32 1793.28 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
77. EIF4G2 ENSG00000110321 697.11 1779.98 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
78. MTRNR2L1 ENSG00000256618 691.91 1766.70 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
79. STMN1 ENSG00000117632 680.00 1736.29 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
80. SERF2 ENSG00000140264 652.48 1666.02 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
81. ITM2C ENSG00000135916 649.50 1658.41 integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
82. RPL22 ENSG00000116251 646.52 1650.80 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
83. RPL3 ENSG00000100316 640.57 1635.61 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
84. RPL27A ENSG00000166441 637.60 1628.03 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
85. MYL6 ENSG00000092841 633.13 1616.61 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
86. HMGN1 ENSG00000205581 630.16 1609.03 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
87. TMEM258 ENSG00000134825 598.16 1527.32 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
88. PFN1 ENSG00000108518 587.75 1500.74 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
89. RPLP1 ENSG00000137818 583.28 1489.33 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
90. MORF4L1 ENSG00000185787 579.57 1479.85 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
91. TOMM6 ENSG00000214736 578.08 1476.05 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
92. TMA7 ENSG00000232112 570.64 1457.05 translation machinery associated 7 homolog [Source:HGNC Symbol;Acc:HGNC:26932]
93. RPL6 ENSG00000089009 568.41 1451.36 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
94. VIM ENSG00000026025 557.25 1422.86 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
95. HNRNPD ENSG00000138668 543.11 1386.76 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
96. SUMO2 ENSG00000188612 543.11 1386.76 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
97. TMSB10 ENSG00000034510 539.39 1377.26 thymosin beta 10 [Source:HGNC Symbol;Acc:HGNC:11879]
98. H3F3B ENSG00000132475 528.23 1348.76 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
99. HNRNPA1 ENSG00000135486 522.28 1333.57 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
100. UBA52 ENSG00000221983 514.09 1312.66 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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