Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s77.

Sample reads: 391,644. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 10972.85 28017.43 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 7240.59 18487.69 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. SFRP1 ENSG00000104332 6117.66 15620.47 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
4. RPS27 ENSG00000177954 5330.64 13610.94 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
5. HIST1H4C ENSG00000197061 4524.15 11551.70 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
6. COL3A1 ENSG00000168542 3316.84 8469.02 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
7. RPS12 ENSG00000112306 3245.44 8286.71 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
8. ACTB ENSG00000075624 2954.98 7545.07 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
9. ACTG1 ENSG00000184009 2695.34 6882.12 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
10. RPL10A ENSG00000198755 2466.54 6297.92 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
11. RPL5 ENSG00000122406 2370.80 6053.46 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
12. RPL37 ENSG00000145592 2330.23 5949.87 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
13. PTMA ENSG00000187514 2245.85 5734.42 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
14. RPL31 ENSG00000071082 2124.14 5423.65 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
15. RPL34 ENSG00000109475 2098.18 5357.37 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
16. RPL15 ENSG00000174748 2088.44 5332.50 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
17. TUBA1B ENSG00000123416 2013.80 5141.92 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
18. PPIA ENSG00000196262 1958.63 5001.05 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
19. RPS6 ENSG00000137154 1945.64 4967.88 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
20. RPS15A ENSG00000134419 1871.00 4777.30 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
21. RPS3A ENSG00000145425 1869.38 4773.16 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
22. GNAS ENSG00000087460 1851.53 4727.59 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
23. RPS29 ENSG00000213741 1848.28 4719.29 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
24. RPS20 ENSG00000008988 1716.84 4383.68 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
25. RPL23 ENSG00000125691 1705.48 4354.67 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
26. RPS23 ENSG00000186468 1705.48 4354.67 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
27. TPT1 ENSG00000133112 1655.18 4226.24 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
28. RPS16 ENSG00000105193 1612.99 4118.51 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
29. RPL7A ENSG00000148303, ENSG00000280858 1559.44 3981.78 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
30. RPL35 ENSG00000136942 1340.37 3422.42 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
31. RPL11 ENSG00000142676 1322.52 3376.84 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
32. MDK ENSG00000110492 1293.31 3302.26 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
33. MTRNR2L1 ENSG00000256618 1277.08 3260.82 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
34. RPL9 ENSG00000163682 1247.87 3186.24 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
35. TMSB4X ENSG00000205542 1241.38 3169.67 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
36. RPS2 ENSG00000140988 1212.17 3095.08 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
37. RPL30 ENSG00000156482 1207.31 3082.67 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
38. HNRNPC ENSG00000092199 1204.06 3074.38 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
39. RPS5 ENSG00000083845 1194.32 3049.51 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
40. RPL10 ENSG00000147403 1150.51 2937.64 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
41. RPS11 ENSG00000142534 1116.43 2850.63 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
42. RPL18A ENSG00000105640 1113.19 2842.35 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
43. RPS27A ENSG00000143947 1111.56 2838.19 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
44. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1101.83 2813.35 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
45. HSP90AB1 ENSG00000096384 1053.15 2689.05 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
46. RPS13 ENSG00000110700 1038.54 2651.75 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
47. NPM1 ENSG00000181163 1020.69 2606.17 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
48. RPL13 ENSG00000167526 1012.58 2585.46 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
49. MALAT1 ENSG00000251562 993.11 2535.75 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
50. HMGB1 ENSG00000189403 984.99 2515.02 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
51. COL1A1 ENSG00000108821 983.37 2510.88 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
52. RPL13AP20 ENSG00000234498 926.57 2365.85 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
53. RPS7 ENSG00000171863 921.71 2353.44 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
54. RPLP0 ENSG00000089157 920.08 2349.28 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
55. RPS8 ENSG00000142937 897.37 2291.29 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
56. UBB ENSG00000170315 858.42 2191.84 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
57. RPL22 ENSG00000116251 842.19 2150.40 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
58. HBE1 ENSG00000213931 824.34 2104.82 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
59. RPS28 ENSG00000233927 806.49 2059.24 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
60. RPL32 ENSG00000144713 788.64 2013.67 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
61. EIF4G2 ENSG00000110321 777.28 1984.66 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
62. HMGA2 ENSG00000149948 739.96 1889.37 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
63. RPL26 ENSG00000161970 726.98 1856.23 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
64. MYL6 ENSG00000092841 725.36 1852.09 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
65. MTRNR2L8 ENSG00000255823 710.75 1814.79 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
66. NGFRAP1 NGFRAP1 701.02 1789.94
67. PFN1 ENSG00000108518 696.15 1777.51 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
68. SERF2 ENSG00000140264 696.15 1777.51 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
69. ID2 ENSG00000115738 694.53 1773.37 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
70. FAU ENSG00000149806 676.68 1727.79 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
71. RPL35A ENSG00000182899 670.18 1711.20 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
72. RPL27A ENSG00000166441 658.83 1682.22 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
73. HNRNPD ENSG00000138668 639.35 1632.48 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
74. RPLP1 ENSG00000137818 598.78 1528.89 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
75. VIM ENSG00000026025 597.16 1524.75 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
76. MORF4L1 ENSG00000185787 590.67 1508.18 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
77. TUBA1A ENSG00000167552 580.93 1483.31 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
78. ZFP36L1 ENSG00000185650 579.31 1479.18 ZFP36 ring finger protein like 1 [Source:HGNC Symbol;Acc:HGNC:1107]
79. HNRNPK ENSG00000165119 577.69 1475.04 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
80. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 577.69 1475.04 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
81. NUCKS1 ENSG00000069275 576.07 1470.90 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
82. HMGN1 ENSG00000205581 567.95 1450.17 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
83. COX7A2 ENSG00000112695 564.71 1441.90 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
84. RPL3 ENSG00000100316 561.46 1433.60 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
85. TOMM6 ENSG00000214736 556.59 1421.16 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
86. RPL39 ENSG00000198918 540.37 1379.75 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
87. STMN1 ENSG00000117632 540.37 1379.75 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
88. H3F3B ENSG00000132475 538.74 1375.59 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
89. H2AFZ ENSG00000164032 527.38 1346.58 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
90. RPL6 ENSG00000089009 527.38 1346.58 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
91. RPS25 ENSG00000118181, ENSG00000280831 524.14 1338.31 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
92. RPL37A ENSG00000197756 522.52 1334.17 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
93. SRP14 ENSG00000140319 522.52 1334.17 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
94. RPS21 ENSG00000171858 517.65 1321.74 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
95. RPS24 ENSG00000138326 509.53 1301.00 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
96. CFL1 ENSG00000172757 494.93 1263.72 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
97. RPL7 ENSG00000147604 493.31 1259.59 ribosomal protein L7 [Source:HGNC Symbol;Acc:HGNC:10363]
98. PCBP1 ENSG00000169564 490.06 1251.29 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
99. ITM2B ENSG00000136156 470.59 1201.58 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
100. RPL4 ENSG00000174444 467.34 1193.28 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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