Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s75.

Sample reads: 391,632. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 12589.23 32145.60 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 5534.73 14132.49 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. SFRP1 ENSG00000104332 5134.02 13109.31 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
4. HIST1H4C ENSG00000197061 4927.49 12581.95 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
5. RPS12 ENSG00000112306 4491.99 11469.94 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
6. RPS27 ENSG00000177954 3971.18 10140.09 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
7. RPL10A ENSG00000198755 3246.08 8288.61 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
8. RPL37 ENSG00000145592 2888.03 7374.35 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
9. RPL31 ENSG00000071082 2838.64 7248.24 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
10. RPL15 ENSG00000174748 2754.46 7033.29 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
11. RPL5 ENSG00000122406 2723.03 6953.04 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
12. RPS15A ENSG00000134419 2675.89 6832.67 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
13. RPS23 ENSG00000186468 2581.60 6591.91 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
14. PTMA ENSG00000187514 2470.48 6308.17 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
15. TUBA1B ENSG00000123416 2464.87 6293.85 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
16. ACTG1 ENSG00000184009 2331.30 5952.79 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
17. ACTB ENSG00000075624 2207.83 5637.52 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
18. RPS6 ENSG00000137154 2197.73 5611.73 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
19. RPS20 ENSG00000008988 2179.77 5565.87 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
20. RPL23 ENSG00000125691 2167.42 5534.33 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
21. TPT1 ENSG00000133112 2122.53 5419.71 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
22. RPL7A ENSG00000148303, ENSG00000280858 2091.10 5339.46 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
23. RPS16 ENSG00000105193 1995.69 5095.84 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
24. PPIA ENSG00000196262 1978.85 5052.84 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
25. RPS3A ENSG00000145425 1900.28 4852.21 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
26. GNAS ENSG00000087460 1894.67 4837.89 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
27. RPL34 ENSG00000109475 1816.10 4637.27 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
28. MDK ENSG00000110492 1736.41 4433.78 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
29. COL3A1 ENSG00000168542 1719.57 4390.79 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
30. RPS29 ENSG00000213741 1715.08 4379.32 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
31. RPS2 ENSG00000140988 1526.51 3897.82 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
32. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1522.02 3886.36 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
33. RPL18A ENSG00000105640 1517.53 3874.89 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
34. RPL9 ENSG00000163682 1476.00 3768.85 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
35. RPL10 ENSG00000147403 1468.15 3748.80 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
36. RPS27A ENSG00000143947 1445.70 3691.48 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
37. TMSB4X ENSG00000205542 1409.78 3599.76 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
38. RPL13AP20 ENSG00000234498 1389.57 3548.16 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
39. RPL11 ENSG00000142676 1386.21 3539.58 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
40. RPS5 ENSG00000083845 1370.49 3499.44 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
41. RPS8 ENSG00000142937 1362.64 3479.39 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
42. RPL30 ENSG00000156482 1342.43 3427.79 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
43. RPS13 ENSG00000110700 1247.03 3184.19 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
44. RPLP0 ENSG00000089157 1227.94 3135.45 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
45. RPL13 ENSG00000167526 1221.21 3118.26 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
46. RPL35 ENSG00000136942 1217.84 3109.66 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
47. RPS11 ENSG00000142534 1212.23 3095.33 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
48. RPS7 ENSG00000171863 1186.41 3029.40 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
49. HSP90AB1 ENSG00000096384 1174.07 2997.89 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
50. HNRNPC ENSG00000092199 1162.84 2969.22 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
51. UBB ENSG00000170315 1112.33 2840.25 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
52. NGFRAP1 NGFRAP1 1057.33 2699.81
53. RPS28 ENSG00000233927 988.87 2525.00 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
54. NPM1 ENSG00000181163 945.09 2413.21 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
55. RPS25 ENSG00000118181, ENSG00000280831 914.78 2335.82 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
56. RPL32 ENSG00000144713 906.93 2315.77 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
57. MTRNR2L1 ENSG00000256618 896.83 2289.98 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
58. RPL27A ENSG00000166441 894.58 2284.24 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
59. MYL6 ENSG00000092841 883.36 2255.59 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
60. RPL35A ENSG00000182899 879.99 2246.98 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
61. FAU ENSG00000149806 877.74 2241.24 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
62. RPL26 ENSG00000161970 851.93 2175.34 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
63. HMGB1 ENSG00000189403 848.56 2166.73 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
64. VIM ENSG00000026025 844.07 2155.27 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
65. ID2 ENSG00000115738 829.48 2118.01 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
66. MTRNR2L8 ENSG00000255823 807.03 2060.69 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
67. H2AFZ ENSG00000164032 776.73 1983.32 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
68. HBE1 ENSG00000213931 758.77 1937.46 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
69. SRP14 ENSG00000140319 752.03 1920.25 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
70. COL1A1 ENSG00000108821 740.81 1891.60 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
71. HMGN1 ENSG00000205581 730.71 1865.81 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
72. RPL22 ENSG00000116251 723.97 1848.60 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
73. PFN1 ENSG00000108518 719.48 1837.13 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
74. SERF2 ENSG00000140264 717.24 1831.42 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
75. COX7A2 ENSG00000112695 698.15 1782.67 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
76. RPL39 ENSG00000198918 693.67 1771.23 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
77. RPS14 ENSG00000164587 681.32 1739.70 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
78. STMN1 ENSG00000117632 651.01 1662.30 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
79. TMEM258 ENSG00000134825 651.01 1662.30 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
80. EIF4G2 ENSG00000110321 634.18 1619.33 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
81. HMGA2 ENSG00000149948 626.32 1599.26 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
82. RPLP1 ENSG00000137818 625.20 1596.40 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
83. HNRNPD ENSG00000138668 599.38 1530.47 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
84. TPM1 ENSG00000140416 592.65 1513.28 tropomyosin 1 [Source:HGNC Symbol;Acc:HGNC:12010]
85. CFL1 ENSG00000172757 591.52 1510.40 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
86. MALAT1 ENSG00000251562 590.40 1507.54 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
87. UBA52 ENSG00000221983 590.40 1507.54 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
88. H3F3B ENSG00000132475 576.93 1473.14 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
89. RPS21 ENSG00000171858 571.32 1458.82 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
90. TOMM6 ENSG00000214736 570.20 1455.96 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
91. HNRNPK ENSG00000165119 569.07 1453.08 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
92. MORF4L1 ENSG00000185787 552.24 1410.10 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
93. RPL6 ENSG00000089009 551.12 1407.24 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
94. RPS19 ENSG00000105372 551.12 1407.24 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
95. TUBA1A ENSG00000167552 543.26 1387.17 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
96. RPL37A ENSG00000197756 542.14 1384.31 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
97. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 541.01 1381.43 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
98. SUMO2 ENSG00000188612 535.40 1367.10 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
99. PCBP1 ENSG00000169564 518.57 1324.13 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
100. ITM2B ENSG00000136156 511.83 1306.92 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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