Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s71.

Sample reads: 391,641. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPS27 ENSG00000177954 10491.79 26789.29 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
2. RPL41 ENSG00000229117 10081.62 25741.98 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
3. SFRP1 ENSG00000104332 7913.04 20204.82 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
4. EEF1A1 ENSG00000156508 6677.13 17049.10 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
5. HIST1H4C ENSG00000197061 3585.16 9154.20 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
6. RPS12 ENSG00000112306 3531.93 9018.28 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
7. RPS20 ENSG00000008988 2824.38 7211.65 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
8. RPS29 ENSG00000213741 2762.36 7053.29 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
9. ACTB ENSG00000075624 2509.42 6407.45 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
10. RPL10A ENSG00000198755 2415.17 6166.79 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
11. ACTG1 ENSG00000184009 2369.76 6050.84 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
12. RPL5 ENSG00000122406 2327.28 5942.38 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
13. RPL37 ENSG00000145592 2292.61 5853.85 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
14. RPS15A ENSG00000134419 2278.45 5817.70 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
15. RPS3A ENSG00000145425 2277.47 5815.20 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
16. COL3A1 ENSG00000168542 2268.68 5792.75 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
17. RPL34 ENSG00000109475 2257.94 5765.33 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
18. RPL31 ENSG00000071082 2175.41 5554.60 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
19. RPL23 ENSG00000125691 2051.87 5239.16 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
20. PTMA ENSG00000187514 2007.92 5126.94 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
21. TPT1 ENSG00000133112 1949.82 4978.59 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
22. RPS6 ENSG00000137154 1847.76 4717.99 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
23. GNAS ENSG00000087460 1839.46 4696.80 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
24. TUBA1B ENSG00000123416 1838.97 4695.55 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
25. RPL15 ENSG00000174748 1708.59 4362.64 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
26. PPIA ENSG00000196262 1669.04 4261.66 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
27. MDK ENSG00000110492 1622.65 4143.21 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
28. RPL11 ENSG00000142676 1568.45 4004.81 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
29. RPS23 ENSG00000186468 1535.24 3920.02 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
30. MTRNR2L8 ENSG00000255823 1527.92 3901.33 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
31. RPS16 ENSG00000105193 1459.55 3726.75 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
32. RPS27A ENSG00000143947 1351.15 3449.97 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
33. HNRNPC ENSG00000092199 1318.92 3367.67 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
34. MALAT1 ENSG00000251562 1254.46 3203.09 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
35. RPL10 ENSG00000147403 1251.05 3194.38 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
36. RPL18A ENSG00000105640 1240.79 3168.18 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
37. RPS13 ENSG00000110700 1210.03 3089.64 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
38. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1183.66 3022.31 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
39. TMSB4X ENSG00000205542 1150.94 2938.76 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
40. RPL9 ENSG00000163682 1148.01 2931.28 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
41. RPL13AP20 ENSG00000234498 1141.67 2915.09 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
42. HMGB1 ENSG00000189403 1118.23 2855.24 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
43. RPL35 ENSG00000136942 1114.32 2845.26 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
44. MTRNR2L1 ENSG00000256618 1110.41 2835.27 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
45. RPS8 ENSG00000142937 1074.77 2744.27 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
46. RPS5 ENSG00000083845 1056.21 2696.88 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
47. RPS11 ENSG00000142534 1036.68 2647.01 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
48. HSP90AB1 ENSG00000096384 1035.21 2643.26 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
49. NPM1 ENSG00000181163 990.29 2528.56 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
50. RPL30 ENSG00000156482 964.41 2462.48 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
51. RPL22 ENSG00000116251 957.08 2443.77 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
52. RPL7A ENSG00000148303, ENSG00000280858 956.60 2442.54 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
53. RPL13 ENSG00000167526 916.55 2340.28 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
54. DLK1 ENSG00000185559 874.07 2231.81 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
55. RPL32 ENSG00000144713 870.17 2221.86 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
56. RPS7 ENSG00000171863 860.89 2198.16 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
57. RPL27A ENSG00000166441 860.40 2196.91 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
58. RPS2 ENSG00000140988 847.22 2163.26 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
59. COL1A1 ENSG00000108821 843.80 2154.52 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
60. MYL6 ENSG00000092841 822.31 2099.65 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
61. RPL26 ENSG00000161970 818.89 2090.92 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
62. RPS28 ENSG00000233927 796.92 2034.82 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
63. HMGN1 ENSG00000205581 782.76 1998.67 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
64. VIM ENSG00000026025 751.02 1917.62 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
65. H2AFZ ENSG00000164032 728.07 1859.02 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
66. UBB ENSG00000170315 717.81 1832.83 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
67. RPL35A ENSG00000182899 713.42 1821.62 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
68. SERF2 ENSG00000140264 707.56 1806.65 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
69. RPL6 ENSG00000089009 695.84 1776.73 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
70. SRP14 ENSG00000140319 694.86 1774.23 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
71. NGFRAP1 NGFRAP1 687.54 1755.54
72. MORF4L1 ENSG00000185787 671.42 1714.38 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
73. RPLP0 ENSG00000089157 667.52 1704.42 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
74. RPS25 ENSG00000118181, ENSG00000280831 666.54 1701.92 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
75. FAU ENSG00000149806 663.12 1693.18 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
76. RPL39 ENSG00000198918 657.75 1679.47 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
77. EIF4G2 ENSG00000110321 656.29 1675.74 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
78. HNRNPD ENSG00000138668 624.06 1593.45 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
79. PFN1 ENSG00000108518 622.10 1588.44 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
80. STMN1 ENSG00000117632 614.29 1568.50 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
81. NUCKS1 ENSG00000069275 599.15 1529.84 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
82. RPLP1 ENSG00000137818 587.43 1499.92 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
83. RPS21 ENSG00000171858 586.46 1497.44 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
84. TUBA1A ENSG00000167552 578.16 1476.25 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
85. COX7A2 ENSG00000112695 569.86 1455.06 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
86. RPS24 ENSG00000138326 562.53 1436.34 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
87. RPS14 ENSG00000164587 557.16 1422.63 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
88. RPL3 ENSG00000100316 555.21 1417.65 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
89. CFL1 ENSG00000172757 549.84 1403.94 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
90. MTRNR2L2 ENSG00000271043 547.39 1397.68 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
91. TMEM258 ENSG00000134825 539.58 1377.74 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
92. UBA52 ENSG00000221983 514.19 1312.91 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
93. ID2 ENSG00000115738 507.84 1296.70 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
94. BTF3 ENSG00000145741 502.96 1284.24 basic transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:1125]
95. RPL4 ENSG00000174444 499.54 1275.50 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
96. HMGA2 ENSG00000149948 495.14 1264.27 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
97. H3F3B ENSG00000132475 487.33 1244.33 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
98. HNRNPK ENSG00000165119 486.36 1241.85 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
99. RPL14 ENSG00000188846 486.36 1241.85 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
100. SUMO2 ENSG00000188612 484.89 1238.10 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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