Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s70.

Sample reads: 391,633. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 11921.29 30439.98 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. SFRP1 ENSG00000104332 6580.55 16802.86 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
3. RPS27 ENSG00000177954 5327.82 13604.13 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. EEF1A1 ENSG00000156508 5216.20 13319.12 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
5. RPS20 ENSG00000008988 3124.92 7979.21 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
6. RPL10A ENSG00000198755 2987.93 7629.42 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
7. RPS12 ENSG00000112306 2940.89 7509.31 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
8. RPL31 ENSG00000071082 2390.62 6104.24 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
9. HIST1H4C ENSG00000197061 2253.63 5754.45 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
10. COL3A1 ENSG00000168542 2207.97 5637.86 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
11. MALAT1 ENSG00000251562 2154.00 5500.05 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
12. ACTB ENSG00000075624 2127.71 5432.92 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
13. PTMA ENSG00000187514 2037.31 5202.09 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
14. DLK1 ENSG00000185559 2023.47 5166.76 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
15. RPL37 ENSG00000145592 2004.10 5117.30 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
16. RPS15A ENSG00000134419 1973.66 5039.57 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
17. ACTG1 ENSG00000184009 1969.05 5027.80 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
18. RPL34 ENSG00000109475 1957.05 4997.16 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
19. GNAS ENSG00000087460 1919.69 4901.76 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
20. RPS6 ENSG00000137154 1893.40 4834.63 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
21. RPL15 ENSG00000174748 1861.58 4753.38 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
22. MTRNR2L8 ENSG00000255823 1799.31 4594.38 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
23. RPL5 ENSG00000122406 1775.79 4534.33 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
24. MDK ENSG00000110492 1724.59 4403.59 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
25. RPL23 ENSG00000125691 1701.06 4343.51 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
26. PPIA ENSG00000196262 1640.18 4188.06 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
27. RPS29 ENSG00000213741 1612.51 4117.40 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
28. RPS3A ENSG00000145425 1569.61 4007.86 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
29. RPL11 ENSG00000142676 1509.65 3854.76 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
30. TPT1 ENSG00000133112 1471.83 3758.19 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
31. RPS23 ENSG00000186468 1423.40 3634.53 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
32. COL1A1 ENSG00000108821 1325.15 3383.66 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
33. HNRNPC ENSG00000092199 1258.73 3214.06 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
34. RPL7A ENSG00000148303, ENSG00000280858 1215.84 3104.54 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
35. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1196.93 3056.26 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
36. TUBA1B ENSG00000123416 1191.39 3042.11 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
37. RPL30 ENSG00000156482 1183.55 3022.09 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
38. MTRNR2L1 ENSG00000256618 1180.78 3015.02 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
39. RPS27A ENSG00000143947 1130.05 2885.48 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
40. RPS2 ENSG00000140988 1116.67 2851.32 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
41. RPL10 ENSG00000147403 1100.53 2810.11 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
42. RPS13 ENSG00000110700 1095.91 2798.31 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
43. TMSB4X ENSG00000205542 1090.38 2784.19 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
44. RPL18A ENSG00000105640 1049.33 2679.37 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
45. RPS16 ENSG00000105193 1047.94 2675.82 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
46. RPL9 ENSG00000163682 1023.04 2612.24 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
47. RPS11 ENSG00000142534 1008.28 2574.56 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
48. NPM1 ENSG00000181163 989.83 2527.45 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
49. HSP90AB1 ENSG00000096384 975.53 2490.93 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
50. UBB ENSG00000170315 974.15 2487.41 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
51. HMGB1 ENSG00000189403 940.47 2401.41 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
52. VIM ENSG00000026025 901.27 2301.31 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
53. RPL13 ENSG00000167526 898.04 2293.07 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
54. RPL22 ENSG00000116251 895.27 2285.99 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
55. RPL35 ENSG00000136942 885.59 2261.28 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
56. RPS5 ENSG00000083845 883.74 2256.55 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
57. RPL13AP20 ENSG00000234498 879.59 2245.96 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
58. RPS8 ENSG00000142937 872.67 2228.29 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
59. RPS28 ENSG00000233927 822.86 2101.10 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
60. HMGN1 ENSG00000205581 802.56 2049.27 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
61. RPL35A ENSG00000182899 779.04 1989.21 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
62. ID2 ENSG00000115738 772.58 1972.72 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
63. RPS7 ENSG00000171863 758.74 1937.38 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
64. FAU ENSG00000149806 737.53 1883.22 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
65. NGFRAP1 NGFRAP1 726.92 1856.13
66. CXCL12 ENSG00000107562 717.69 1832.56 C-X-C motif chemokine ligand 12 [Source:HGNC Symbol;Acc:HGNC:10672]
67. RPL6 ENSG00000089009 717.23 1831.38 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
68. MTRNR2L2 ENSG00000271043 705.70 1801.94 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
69. RPL26 ENSG00000161970 702.01 1792.52 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
70. EIF4G2 ENSG00000110321 700.63 1789.00 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
71. HNRNPD ENSG00000138668 696.02 1777.23 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
72. RPLP0 ENSG00000089157 694.63 1773.68 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
73. RPL3 ENSG00000100316 675.72 1725.39 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
74. RPS25 ENSG00000118181, ENSG00000280831 673.88 1720.69 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
75. RPL32 ENSG00000144713 653.58 1668.86 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
76. MORF4L1 ENSG00000185787 652.66 1666.51 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
77. SRP14 ENSG00000140319 648.51 1655.91 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
78. RPL27A ENSG00000166441 633.75 1618.23 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
79. SERF2 ENSG00000140264 623.60 1592.31 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
80. H2AFZ ENSG00000164032 607.92 1552.27 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
81. UBA52 ENSG00000221983 595.46 1520.46 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
82. PFN1 ENSG00000108518 594.54 1518.11 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
83. MYL6 ENSG00000092841 593.16 1514.58 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
84. STMN1 ENSG00000117632 585.32 1494.56 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
85. SUMO2 ENSG00000188612 569.17 1453.33 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
86. H3F3B ENSG00000132475 560.87 1432.13 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
87. NUCKS1 ENSG00000069275 560.41 1430.96 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
88. TUBA1A ENSG00000167552 547.50 1397.99 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
89. RPS21 ENSG00000171858 538.27 1374.43 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
90. RPL39 ENSG00000198918 524.89 1340.26 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
91. TOMM6 ENSG00000214736 521.67 1332.04 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
92. ITM2C ENSG00000135916 516.13 1317.89 integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
93. RPLP1 ENSG00000137818 499.06 1274.31 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
94. CFL1 ENSG00000172757 496.30 1267.26 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
95. HNRNPK ENSG00000165119 496.30 1267.26 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
96. TPM1 ENSG00000140416 493.53 1260.19 tropomyosin 1 [Source:HGNC Symbol;Acc:HGNC:12010]
97. CAPNS1 ENSG00000126247 487.53 1244.87 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
98. RPS24 ENSG00000138326 487.07 1243.69 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
99. TMA7 ENSG00000232112 485.69 1240.17 translation machinery associated 7 homolog [Source:HGNC Symbol;Acc:HGNC:26932]
100. HNRNPA1L2 ENSG00000139675 485.23 1238.99 heterogeneous nuclear ribonucleoprotein A1-like 2 [Source:HGNC Symbol;Acc:HGNC:27067]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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