Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s69.

Sample reads: 391,634. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 6796.07 17353.13 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. SFRP1 ENSG00000104332 6681.05 17059.44 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
3. EEF1A1 ENSG00000156508 6066.12 15489.27 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
4. RPS27 ENSG00000177954 4369.20 11156.34 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
5. DLK1 ENSG00000185559 3656.38 9336.22 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
6. ACTG1 ENSG00000184009 3285.29 8388.68 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
7. RPS12 ENSG00000112306 2860.54 7304.12 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
8. ACTB ENSG00000075624 2726.29 6961.33 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
9. PTMA ENSG00000187514 2640.47 6742.19 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
10. GNAS ENSG00000087460 2539.79 6485.12 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
11. MDK ENSG00000110492 2271.65 5800.45 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
12. RPL5 ENSG00000122406 2229.87 5693.76 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
13. RPL10A ENSG00000198755 2151.39 5493.37 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
14. MALAT1 ENSG00000251562 1990.58 5082.76 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
15. RPS6 ENSG00000137154 1858.43 4745.33 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
16. RPS20 ENSG00000008988 1726.46 4408.35 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
17. TUBA1B ENSG00000123416 1696.57 4332.03 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
18. COL3A1 ENSG00000168542 1665.11 4251.70 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
19. HSP90AB1 ENSG00000096384 1537.51 3925.89 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
20. RPL15 ENSG00000174748 1530.16 3907.12 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
21. PPIA ENSG00000196262 1520.03 3881.25 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
22. RPL37 ENSG00000145592 1444.86 3689.31 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
23. RPL11 ENSG00000142676 1408.16 3595.60 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
24. RPL31 ENSG00000071082 1397.84 3569.25 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
25. RPL34 ENSG00000109475 1389.10 3546.94 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
26. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1386.83 3541.14 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
27. RPL7A ENSG00000148303, ENSG00000280858 1378.79 3520.61 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
28. COL1A1 ENSG00000108821 1362.53 3479.09 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
29. RPS3A ENSG00000145425 1345.75 3436.25 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
30. RPS15A ENSG00000134419 1315.69 3359.49 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
31. RPS29 ENSG00000213741 1270.24 3243.44 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
32. TPT1 ENSG00000133112 1264.30 3228.27 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
33. RPS16 ENSG00000105193 1220.25 3115.79 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
34. HNRNPC ENSG00000092199 1194.38 3049.74 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
35. RPL23 ENSG00000125691 1177.78 3007.35 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
36. MTRNR2L1 ENSG00000256618 1162.22 2967.62 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
37. RPS2 ENSG00000140988 1121.67 2864.08 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
38. MTRNR2L8 ENSG00000255823 1119.39 2858.26 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
39. RPS8 ENSG00000142937 1087.23 2776.14 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
40. RPL13 ENSG00000167526 1076.04 2747.57 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
41. RPL18A ENSG00000105640 1062.58 2713.20 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
42. HIST1H4C ENSG00000197061 1040.56 2656.97 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
43. CXCL12 ENSG00000107562 1000.01 2553.43 C-X-C motif chemokine ligand 12 [Source:HGNC Symbol;Acc:HGNC:10672]
44. NGFRAP1 NGFRAP1 976.41 2493.17
45. RPS23 ENSG00000186468 975.54 2490.95 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
46. NPM1 ENSG00000181163 941.98 2405.26 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
47. RPS5 ENSG00000083845 931.14 2377.58 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
48. TMSB4X ENSG00000205542 929.91 2374.44 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
49. RPS13 ENSG00000110700 915.06 2336.52 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
50. RPS28 ENSG00000233927 889.19 2270.46 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
51. VIM ENSG00000026025 871.88 2226.26 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
52. RPL35 ENSG00000136942 850.73 2172.26 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
53. MEG3 ENSG00000214548 849.51 2169.14 maternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:14575]
54. RPL9 ENSG00000163682 848.46 2166.46 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
55. RPL10 ENSG00000147403 843.39 2153.52 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
56. RPL27A ENSG00000166441 834.30 2130.31 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
57. RPS27A ENSG00000143947 829.23 2117.36 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
58. UBB ENSG00000170315 825.74 2108.45 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
59. HMGN1 ENSG00000205581 805.63 2057.10 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
60. RPL22 ENSG00000116251 785.88 2006.67 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
61. RPS11 ENSG00000142534 778.89 1988.82 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
62. HMGB1 ENSG00000189403 762.11 1945.98 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
63. RPL30 ENSG00000156482 756.87 1932.60 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
64. SERF2 ENSG00000140264 724.00 1848.67 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
65. RPLP0 ENSG00000089157 697.26 1780.39 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
66. CFL1 ENSG00000172757 687.30 1754.96 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
67. RPL3 ENSG00000100316 683.10 1744.23 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
68. RPL6 ENSG00000089009 681.35 1739.76 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
69. STMN1 ENSG00000117632 673.14 1718.80 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
70. EIF4G2 ENSG00000110321 656.36 1675.95 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
71. IFITM2 ENSG00000185201 644.82 1646.49 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
72. H3F3B ENSG00000132475 635.73 1623.28 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
73. HNRNPD ENSG00000138668 624.55 1594.73 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
74. TUBA1A ENSG00000167552 613.01 1565.26 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
75. PFN1 ENSG00000108518 609.16 1555.43 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
76. CAPNS1 ENSG00000126247 596.75 1523.75 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
77. MORF4L1 ENSG00000185787 596.23 1522.42 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
78. IFITM3 ENSG00000142089 588.36 1502.32 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
79. FAU ENSG00000149806 586.79 1498.31 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
80. RPS7 ENSG00000171863 565.29 1443.42 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
81. RPL13AP20 ENSG00000234498 555.85 1419.31 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
82. HNRNPA1 ENSG00000135486 551.31 1407.72 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
83. ID2 ENSG00000115738 546.94 1396.56 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
84. GPC3 ENSG00000147257 543.79 1388.52 glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
85. HNRNPA1L2 ENSG00000139675 538.20 1374.24 heterogeneous nuclear ribonucleoprotein A1-like 2 [Source:HGNC Symbol;Acc:HGNC:27067]
86. HNRNPK ENSG00000165119 535.92 1368.42 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
87. MYL6 ENSG00000092841 535.40 1367.09 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
88. RPLP1 ENSG00000137818 531.55 1357.26 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
89. RPL4 ENSG00000174444 524.21 1338.52 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
90. RPL26 ENSG00000161970 520.54 1329.15 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
91. NUCKS1 ENSG00000069275 512.33 1308.19 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
92. PCBP1 ENSG00000169564 509.53 1301.04 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
93. MARCKSL1 ENSG00000175130 507.08 1294.78 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
94. CIRBP ENSG00000099622 506.73 1293.89 cold inducible RNA binding protein [Source:HGNC Symbol;Acc:HGNC:1982]
95. PCBP2 ENSG00000197111 494.50 1262.66 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
96. RPL35A ENSG00000182899 488.38 1247.03 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
97. PNISR ENSG00000132424 486.63 1242.56 PNN interacting serine and arginine rich protein [Source:HGNC Symbol;Acc:HGNC:21222]
98. RPL14 ENSG00000188846 485.93 1240.78 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
99. RPL32 ENSG00000144713 485.93 1240.78 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
100. BTF3 ENSG00000145741 485.06 1238.56 basic transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:1125]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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