Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s64.

Sample reads: 391,639. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 12580.03 32121.47 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 5091.23 12999.80 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPS27 ENSG00000177954 5088.32 12992.37 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. DLK1 ENSG00000185559 4253.23 10860.07 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
5. RPS12 ENSG00000112306 3539.07 9036.56 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
6. SFRP1 ENSG00000104332 3024.71 7723.20 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
7. RPL5 ENSG00000122406 2525.22 6447.82 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
8. ACTB ENSG00000075624 2481.70 6336.70 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
9. PTMA ENSG00000187514 2162.42 5521.46 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
10. ACTG1 ENSG00000184009 2161.34 5518.70 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
11. RPS20 ENSG00000008988 2121.45 5416.85 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
12. PPIA ENSG00000196262 2103.68 5371.47 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
13. RPL10A ENSG00000198755 2082.83 5318.24 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
14. RPL31 ENSG00000071082 1970.97 5032.62 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
15. GNAS ENSG00000087460 1946.49 4970.11 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
16. RPL15 ENSG00000174748 1917.48 4896.04 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
17. RPL37 ENSG00000145592 1910.41 4877.98 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
18. TUBA1B ENSG00000123416 1880.68 4802.07 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
19. RPS15A ENSG00000134419 1873.42 4783.53 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
20. RPS6 ENSG00000137154 1866.17 4765.02 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
21. RPL34 ENSG00000109475 1756.85 4485.89 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
22. RPL7A ENSG00000148303, ENSG00000280858 1753.76 4478.00 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
23. TPT1 ENSG00000133112 1655.68 4227.56 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
24. RPS23 ENSG00000186468 1550.88 3959.97 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
25. MDK ENSG00000110492 1502.84 3837.31 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
26. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1496.13 3820.17 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
27. MTRNR2L8 ENSG00000255823 1463.13 3735.91 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
28. RPL11 ENSG00000142676 1443.19 3685.00 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
29. RPL18A ENSG00000105640 1433.40 3660.00 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
30. RPS2 ENSG00000140988 1431.95 3656.30 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
31. RPS29 ENSG00000213741 1380.27 3524.34 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
32. COL3A1 ENSG00000168542 1361.78 3477.13 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
33. HSP90AB1 ENSG00000096384 1358.52 3468.80 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
34. HNRNPC ENSG00000092199 1284.55 3279.93 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
35. HIST1H4C ENSG00000197061 1183.92 3022.99 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
36. COL1A1 ENSG00000108821 1151.65 2940.59 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
37. RPS16 ENSG00000105193 1148.02 2931.32 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
38. NPM1 ENSG00000181163 1141.13 2913.73 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
39. RPL23 ENSG00000125691 1129.53 2884.11 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
40. RPS27A ENSG00000143947 1117.75 2854.03 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
41. RPS13 ENSG00000110700 1104.15 2819.30 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
42. RPL30 ENSG00000156482 1077.31 2750.77 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
43. RPL13AP20 ENSG00000234498 1061.90 2711.42 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
44. RPS3A ENSG00000145425 1046.49 2672.08 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
45. RPL13 ENSG00000167526 1040.15 2655.89 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
46. RPL10 ENSG00000147403 1027.46 2623.49 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
47. MALAT1 ENSG00000251562 1023.10 2612.35 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
48. MTRNR2L1 ENSG00000256618 1010.23 2579.49 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
49. RPS8 ENSG00000142937 987.02 2520.23 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
50. RPS11 ENSG00000142534 976.87 2494.31 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
51. TMSB4X ENSG00000205542 931.91 2379.51 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
52. RPS7 ENSG00000171863 929.91 2374.40 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
53. RPLP0 ENSG00000089157 925.56 2363.30 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
54. RPL9 ENSG00000163682 921.57 2353.11 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
55. NGFRAP1 NGFRAP1 900.54 2299.41
56. RPL35 ENSG00000136942 891.30 2275.82 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
57. H2AFZ ENSG00000164032 857.39 2189.23 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
58. RPL35A ENSG00000182899 854.85 2182.75 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
59. RPS5 ENSG00000083845 849.23 2168.40 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
60. VIM ENSG00000026025 812.97 2075.81 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
61. UBB ENSG00000170315 807.35 2061.46 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
62. HMGN1 ENSG00000205581 800.10 2042.95 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
63. RPL26 ENSG00000161970 765.83 1955.45 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
64. RPS28 ENSG00000233927 762.57 1947.12 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
65. RPL27A ENSG00000166441 761.30 1943.88 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
66. HNRNPD ENSG00000138668 748.25 1910.56 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
67. RPL3 ENSG00000100316 734.29 1874.91 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
68. GPC3 ENSG00000147257 719.06 1836.03 glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
69. RPL6 ENSG00000089009 711.44 1816.57 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
70. RPL22 ENSG00000116251 706.36 1803.60 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
71. SRP14 ENSG00000140319 700.20 1787.87 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
72. SERF2 ENSG00000140264 698.93 1784.63 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
73. MORF4L1 ENSG00000185787 677.17 1729.07 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
74. RPL32 ENSG00000144713 676.09 1726.31 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
75. EIF4G2 ENSG00000110321 652.88 1667.04 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
76. RPS25 ENSG00000118181, ENSG00000280831 648.71 1656.40 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
77. TUBA1A ENSG00000167552 641.64 1638.34 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
78. GAPDH ENSG00000111640 624.96 1595.75 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
79. PFN1 ENSG00000108518 620.43 1584.19 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
80. TOMM6 ENSG00000214736 616.80 1574.92 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
81. FAU ENSG00000149806 614.81 1569.84 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
82. STMN1 ENSG00000117632 610.64 1559.19 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
83. HMGB1 ENSG00000189403 608.10 1552.70 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
84. HNRNPK ENSG00000165119 592.32 1512.41 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
85. RPL39 ENSG00000198918 591.05 1509.17 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
86. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 577.82 1475.39 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
87. MYL6 ENSG00000092841 573.65 1464.74 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
88. CAPNS1 ENSG00000126247 557.69 1423.99 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
89. CFL1 ENSG00000172757 552.07 1409.64 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
90. UBA52 ENSG00000221983 547.36 1397.61 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
91. HMGA2 ENSG00000149948 544.64 1390.67 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
92. SUMO2 ENSG00000188612 533.94 1363.35 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
93. PEG10 ENSG00000242265 529.41 1351.78 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
94. MTRNR2L2 ENSG00000271043 529.23 1351.32 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
95. IFITM2 ENSG00000185201 515.81 1317.05 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
96. RPS14 ENSG00000164587 515.09 1315.22 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
97. ATP5G2 512.19 1307.81 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
98. COX7A2 ENSG00000112695 509.83 1301.78 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
99. RPS21 ENSG00000171858 509.65 1301.33 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
100. BTF3 ENSG00000145741 508.74 1299.00 basic transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:1125]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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