Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s61.

Sample reads: 391,638. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. EEF1A1 ENSG00000156508 7103.85 18138.81 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
2. RPL41 ENSG00000229117 5714.12 14590.31 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
3. DLK1 ENSG00000185559 5250.17 13405.67 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
4. RPS27 ENSG00000177954 3205.37 8184.52 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
5. SFRP1 ENSG00000104332 3090.64 7891.57 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
6. ACTB ENSG00000075624 2966.05 7573.45 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
7. RPS12 ENSG00000112306 2816.10 7190.57 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
8. PTMA ENSG00000187514 2714.75 6931.78 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
9. GNAS ENSG00000087460 2604.15 6649.38 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
10. ACTG1 ENSG00000184009 2418.07 6174.25 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
11. RPL5 ENSG00000122406 2402.87 6135.44 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
12. TUBA1B ENSG00000123416 2329.30 5947.58 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
13. RPL10A ENSG00000198755 2091.90 5341.41 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
14. RPS6 ENSG00000137154 2074.48 5296.93 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
15. PPIA ENSG00000196262 1997.70 5100.88 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
16. HSP90AB1 ENSG00000096384 1833.25 4680.98 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
17. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1787.36 4563.81 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
18. MDK ENSG00000110492 1753.85 4478.24 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
19. RPL15 ENSG00000174748 1579.84 4033.93 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
20. RPL11 ENSG00000142676 1560.92 3985.62 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
21. RPL31 ENSG00000071082 1528.82 3903.66 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
22. MALAT1 ENSG00000251562 1509.59 3854.55 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
23. RPL7A ENSG00000148303, ENSG00000280858 1486.65 3795.98 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
24. RPS20 ENSG00000008988 1426.47 3642.32 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
25. RPL34 ENSG00000109475 1423.15 3633.84 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
26. HNRNPC ENSG00000092199 1401.21 3577.82 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
27. RPL37 ENSG00000145592 1380.17 3524.10 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
28. MTRNR2L1 ENSG00000256618 1322.10 3375.82 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
29. RPS3A ENSG00000145425 1233.44 3149.44 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
30. RPS2 ENSG00000140988 1205.56 3078.25 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
31. RPS23 ENSG00000186468 1144.47 2922.26 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
32. RPL23 ENSG00000125691 1139.24 2908.91 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
33. COL3A1 ENSG00000168542 1119.41 2858.28 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
34. TPT1 ENSG00000133112 1116.80 2851.61 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
35. PEG10 ENSG00000242265 1098.88 2805.86 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
36. RPS16 ENSG00000105193 1078.66 2754.23 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
37. RPS15A ENSG00000134419 1061.14 2709.49 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
38. NGFRAP1 NGFRAP1 1051.08 2683.80
39. RPS8 ENSG00000142937 1016.26 2594.90 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
40. RPL13 ENSG00000167526 1015.55 2593.08 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
41. GPC3 ENSG00000147257 1004.79 2565.61 glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
42. NPM1 ENSG00000181163 1002.37 2559.43 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
43. RPS13 ENSG00000110700 939.37 2398.57 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
44. RPL35 ENSG00000136942 927.09 2367.21 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
45. COL1A1 ENSG00000108821 904.85 2310.42 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
46. MTRNR2L8 ENSG00000255823 878.89 2244.14 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
47. HMGN1 ENSG00000205581 866.00 2211.23 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
48. UBB ENSG00000170315 850.61 2171.93 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
49. RPS29 ENSG00000213741 846.28 2160.87 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
50. RPS27A ENSG00000143947 840.24 2145.45 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
51. RPS5 ENSG00000083845 835.91 2134.39 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
52. RPL22 ENSG00000116251 829.37 2117.69 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
53. TMSB4X ENSG00000205542 828.36 2115.12 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
54. RPL18A ENSG00000105640 828.06 2114.35 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
55. TUBA1A ENSG00000167552 826.86 2111.29 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
56. HMGB1 ENSG00000189403 821.22 2096.88 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
57. SERF2 ENSG00000140264 806.12 2058.33 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
58. RPL10 ENSG00000147403 802.90 2050.11 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
59. RPL27A ENSG00000166441 799.38 2041.12 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
60. CCND2 ENSG00000118971 784.69 2003.61 cyclin D2 [Source:HGNC Symbol;Acc:HGNC:1583]
61. EIF4G2 ENSG00000110321 780.66 1993.32 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
62. HNRNPD ENSG00000138668 778.55 1987.93 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
63. RPLP0 ENSG00000089157 775.43 1979.97 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
64. RPL9 ENSG00000163682 766.67 1957.60 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
65. VIM ENSG00000026025 757.21 1933.44 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
66. RPS11 ENSG00000142534 751.88 1919.83 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
67. HIST1H4C ENSG00000197061 744.23 1900.30 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
68. STMN1 ENSG00000117632 740.31 1890.29 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
69. RPL3 ENSG00000100316 689.28 1759.99 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
70. RPL6 ENSG00000089009 672.17 1716.30 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
71. HMGA2 ENSG00000149948 664.72 1697.28 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
72. CFL1 ENSG00000172757 658.69 1681.88 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
73. RPS28 ENSG00000233927 654.76 1671.85 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
74. NUCKS1 ENSG00000069275 634.03 1618.92 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
75. RPL13AP20 ENSG00000234498 631.51 1612.48 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
76. MYL6 ENSG00000092841 628.90 1605.82 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
77. PFN1 ENSG00000108518 617.93 1577.81 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
78. RPS7 ENSG00000171863 613.30 1565.99 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
79. RPL30 ENSG00000156482 611.08 1560.32 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
80. BTF3 ENSG00000145741 585.12 1494.03 basic transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:1125]
81. MARCKSL1 ENSG00000175130 581.29 1484.25 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
82. SRP14 ENSG00000140319 577.67 1475.01 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
83. HNRNPK ENSG00000165119 576.26 1471.41 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
84. FAU ENSG00000149806 571.23 1458.57 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
85. HNRNPA1L2 ENSG00000139675 562.37 1435.94 heterogeneous nuclear ribonucleoprotein A1-like 2 [Source:HGNC Symbol;Acc:HGNC:27067]
86. CAPNS1 ENSG00000126247 559.96 1429.79 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
87. TOMM6 ENSG00000214736 559.66 1429.02 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
88. TPM1 ENSG00000140416 557.74 1424.12 tropomyosin 1 [Source:HGNC Symbol;Acc:HGNC:12010]
89. MORF4L1 ENSG00000185787 556.03 1419.75 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
90. RPL26 ENSG00000161970 546.27 1394.83 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
91. RPL32 ENSG00000144713 529.57 1352.19 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
92. RPL4 ENSG00000174444 527.75 1347.55 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
93. HNRNPA1 ENSG00000135486 518.19 1323.13 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
94. RPL35A ENSG00000182899 510.34 1303.09 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
95. YBX1 ENSG00000065978 508.93 1299.49 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
96. H2AFZ ENSG00000164032 508.83 1299.24 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
97. RPLP1 ENSG00000137818 508.33 1297.96 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
98. SRSF2 ENSG00000161547 493.94 1261.22 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
99. UBA52 ENSG00000221983 491.73 1255.57 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
100. ATP5G2 491.42 1254.78 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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