Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s60.

Sample reads: 391,647. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 12484.06 31875.80 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 4516.14 11531.15 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPS27 ENSG00000177954 4433.47 11320.07 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. DLK1 ENSG00000185559 3935.05 10047.44 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
5. ACTB ENSG00000075624 2921.57 7459.70 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
6. PPIA ENSG00000196262 2437.33 6223.28 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
7. SFRP1 ENSG00000104332 2432.44 6210.80 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
8. TUBA1B ENSG00000123416 2424.13 6189.58 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
9. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2200.60 5618.84 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
10. RPS12 ENSG00000112306 2194.24 5602.60 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
11. PTMA ENSG00000187514 2037.72 5202.95 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
12. ACTG1 ENSG00000184009 1989.78 5080.54 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
13. RPS20 ENSG00000008988 1951.14 4981.88 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
14. RPL10A ENSG00000198755 1938.42 4949.41 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
15. RPL31 ENSG00000071082 1912.50 4883.22 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
16. MDK ENSG00000110492 1899.29 4849.49 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
17. GNAS ENSG00000087460 1865.05 4762.07 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
18. RPL15 ENSG00000174748 1770.16 4519.78 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
19. RPL5 ENSG00000122406 1767.23 4512.30 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
20. RPS6 ENSG00000137154 1673.80 4273.75 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
21. HNRNPC ENSG00000092199 1644.45 4198.81 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
22. RPL34 ENSG00000109475 1612.66 4117.64 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
23. PEG10 ENSG00000242265 1565.70 3997.73 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
24. HSP90AB1 ENSG00000096384 1516.79 3872.85 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
25. RPL37 ENSG00000145592 1419.45 3624.31 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
26. RPS23 ENSG00000186468 1410.65 3601.84 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
27. RPL7A ENSG00000148303, ENSG00000280858 1391.57 3553.12 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
28. RPL18A ENSG00000105640 1362.23 3478.21 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
29. COL1A1 ENSG00000108821 1283.48 3277.13 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
30. RPS15A ENSG00000134419 1282.99 3275.88 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
31. RPL11 ENSG00000142676 1223.80 3124.75 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
32. TPT1 ENSG00000133112 1219.89 3114.77 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
33. MTRNR2L1 ENSG00000256618 1155.81 2951.15 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
34. RPL23 ENSG00000125691 1139.67 2909.94 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
35. MTRNR2L8 ENSG00000255823 1132.34 2891.23 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
36. COL3A1 ENSG00000168542 1125.98 2874.99 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
37. RPL10 ENSG00000147403 1117.17 2852.49 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
38. RPS5 ENSG00000083845 1087.34 2776.33 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
39. RPL35 ENSG00000136942 1066.79 2723.86 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
40. RPL13AP20 ENSG00000234498 1059.46 2705.14 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
41. RPS2 ENSG00000140988 1035.98 2645.19 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
42. NPM1 ENSG00000181163 1027.66 2623.94 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
43. UBB ENSG00000170315 1024.73 2616.46 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
44. RPS29 ENSG00000213741 1016.41 2595.22 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
45. RPS16 ENSG00000105193 1001.74 2557.76 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
46. NGFRAP1 NGFRAP1 979.24 2500.31
47. RPS27A ENSG00000143947 953.31 2434.11 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
48. RPL13 ENSG00000167526 947.44 2419.12 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
49. RPS11 ENSG00000142534 944.02 2410.38 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
50. RPS13 ENSG00000110700 928.86 2371.68 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
51. RPL32 ENSG00000144713 903.42 2306.72 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
52. GAPDH ENSG00000111640 902.44 2304.22 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
53. RPS8 ENSG00000142937 886.79 2264.26 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
54. SERF2 ENSG00000140264 876.03 2236.78 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
55. RPS3A ENSG00000145425 835.43 2133.12 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
56. GPC3 ENSG00000147257 826.63 2110.65 glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
57. MYL6 ENSG00000092841 795.81 2031.96 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
58. RPLP0 ENSG00000089157 790.43 2018.22 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
59. RPS28 ENSG00000233927 783.10 1999.50 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
60. HMGN1 ENSG00000205581 752.28 1920.81 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
61. RPS14 ENSG00000164587 746.90 1907.07 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
62. VIM ENSG00000026025 738.10 1884.61 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
63. HIST1H4C ENSG00000197061 733.21 1872.12 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
64. UBA52 ENSG00000221983 732.23 1869.62 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
65. HNRNPD ENSG00000138668 726.85 1855.88 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
66. HMGA2 ENSG00000149948 721.96 1843.39 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
67. TOMM6 ENSG00000214736 715.60 1827.16 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
68. RPL9 ENSG00000163682 698.48 1783.44 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
69. RPL22 ENSG00000116251 697.50 1780.94 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
70. CCND2 ENSG00000118971 692.61 1768.45 cyclin D2 [Source:HGNC Symbol;Acc:HGNC:1583]
71. SRP14 ENSG00000140319 688.21 1757.22 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
72. RPL3 ENSG00000100316 687.23 1754.72 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
73. COX7A2 ENSG00000112695 680.38 1737.23 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
74. EIF4G2 ENSG00000110321 653.97 1669.79 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
75. RPL6 ENSG00000089009 653.48 1668.54 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
76. FAU ENSG00000149806 640.27 1634.81 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
77. STMN1 ENSG00000117632 633.42 1617.32 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
78. CAPNS1 ENSG00000126247 625.11 1596.11 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
79. RPL26 ENSG00000161970 612.88 1564.88 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
80. H2AFZ ENSG00000164032 610.43 1558.62 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
81. TMSB4X ENSG00000205542 610.43 1558.62 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
82. MORF4L1 ENSG00000185787 604.56 1543.63 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
83. PFN1 ENSG00000108518 604.08 1542.41 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
84. NUCKS1 ENSG00000069275 596.25 1522.42 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
85. RPL4 ENSG00000174444 584.02 1491.19 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
86. RPL27A ENSG00000166441 580.60 1482.46 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
87. CFL1 ENSG00000172757 577.66 1474.95 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
88. HNRNPK ENSG00000165119 575.71 1469.97 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
89. RPL30 ENSG00000156482 574.24 1466.22 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
90. TMEM258 ENSG00000134825 565.43 1443.72 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
91. TPM1 ENSG00000140416 564.46 1441.25 tropomyosin 1 [Source:HGNC Symbol;Acc:HGNC:12010]
92. SPARC ENSG00000113140 541.96 1383.80 secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
93. IFITM2 ENSG00000185201 534.62 1365.06 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
94. RPS7 ENSG00000171863 530.71 1355.07 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
95. HMGB1 ENSG00000189403 527.28 1346.31 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
96. RPL14 ENSG00000188846 499.40 1275.13 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
97. MAGED2 ENSG00000102316 496.96 1268.90 MAGE family member D2 [Source:HGNC Symbol;Acc:HGNC:16353]
98. PXDN ENSG00000130508 490.11 1251.41 peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
99. RPL35A ENSG00000182899 481.79 1230.16 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
100. ITM2B ENSG00000136156 474.95 1212.70 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA