Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s58.

Sample reads: 391,650. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 11509.03 29385.97 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. RPS27 ENSG00000177954 5024.37 12828.71 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
3. EEF1A1 ENSG00000156508 3932.83 10041.68 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
4. ACTB ENSG00000075624 3819.17 9751.48 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
5. RPS12 ENSG00000112306 2497.06 6375.74 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
6. TUBA1B ENSG00000123416 2488.06 6352.76 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
7. PPIA ENSG00000196262 2291.01 5849.63 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
8. ACTG1 ENSG00000184009 2165.92 5530.24 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
9. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2144.66 5475.95 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
10. PTMA ENSG00000187514 1948.42 4974.90 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
11. GNAS ENSG00000087460 1865.84 4764.04 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
12. RPL31 ENSG00000071082 1859.30 4747.35 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
13. RPL37 ENSG00000145592 1850.31 4724.39 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
14. RPL10A ENSG00000198755 1670.43 4265.10 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
15. RPL15 ENSG00000174748 1660.62 4240.06 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
16. SFRP1 ENSG00000104332 1612.38 4116.89 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
17. MTRNR2L1 ENSG00000256618 1569.04 4006.23 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
18. RPS20 ENSG00000008988 1554.32 3968.64 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
19. RPS6 ENSG00000137154 1548.60 3954.04 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
20. RPL18A ENSG00000105640 1528.98 3903.94 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
21. RPL34 ENSG00000109475 1488.10 3799.56 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
22. DLK1 ENSG00000185559 1459.48 3726.49 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
23. RPS23 ENSG00000186468 1456.21 3718.14 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
24. HSP90AB1 ENSG00000096384 1417.78 3620.01 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
25. RPL5 ENSG00000122406 1389.98 3549.03 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
26. RPS15A ENSG00000134419 1382.62 3530.24 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
27. TPT1 ENSG00000133112 1333.56 3404.98 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
28. RPL23 ENSG00000125691 1307.40 3338.18 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
29. MDK ENSG00000110492 1282.05 3273.45 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
30. MTRNR2L8 ENSG00000255823 1273.06 3250.50 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
31. HBE1 ENSG00000213931 1250.16 3192.03 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
32. HNRNPC ENSG00000092199 1176.58 3004.16 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
33. RPL7A ENSG00000148303, ENSG00000280858 1143.05 2918.55 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
34. RPL11 ENSG00000142676 1118.53 2855.94 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
35. RPL35 ENSG00000136942 1116.89 2851.75 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
36. PFN1 ENSG00000108518 1111.17 2837.15 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
37. COX7A2 ENSG00000112695 1105.44 2822.52 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
38. ITM2C ENSG00000135916 1094.00 2793.31 integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
39. RPS5 ENSG00000083845 1067.01 2724.39 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
40. RPS2 ENSG00000140988 1050.66 2682.65 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
41. UBB ENSG00000170315 1036.76 2647.16 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
42. RPS27A ENSG00000143947 1034.31 2640.90 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
43. HIST1H4C ENSG00000197061 1031.86 2634.65 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
44. ITM2B ENSG00000136156 1028.59 2626.30 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
45. RPS29 ENSG00000213741 1011.41 2582.43 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
46. SPINT2 ENSG00000167642 993.43 2536.52 serine peptidase inhibitor, Kunitz type 2 [Source:HGNC Symbol;Acc:HGNC:11247]
47. RPL10 ENSG00000147403 942.73 2407.07 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
48. SERF2 ENSG00000140264 917.39 2342.37 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
49. CAPNS1 ENSG00000126247 907.58 2317.32 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
50. VIM ENSG00000026025 904.30 2308.95 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
51. NPHS2 ENSG00000116218 895.31 2285.99 NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
52. RPS3A ENSG00000145425 861.79 2200.41 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
53. RPS8 ENSG00000142937 859.33 2194.12 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
54. RPS13 ENSG00000110700 847.89 2164.92 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
55. RPS16 ENSG00000105193 847.07 2162.82 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
56. NGFRAP1 NGFRAP1 842.98 2152.38
57. MYL6 ENSG00000092841 822.54 2100.19 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
58. NPM1 ENSG00000181163 807.01 2060.54 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
59. EIF4G2 ENSG00000110321 782.48 1997.90 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
60. RPL13AP20 ENSG00000234498 781.66 1995.81 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
61. RPLP0 ENSG00000089157 764.49 1951.97 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
62. RPL13 ENSG00000167526 739.96 1889.34 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
63. RPS11 ENSG00000142534 739.96 1889.34 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
64. RPS7 ENSG00000171863 728.51 1860.10 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
65. HMGN1 ENSG00000205581 726.88 1855.94 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
66. SPARC ENSG00000113140 726.06 1853.85 secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
67. HBZ ENSG00000130656 721.97 1843.40 hemoglobin subunit zeta [Source:HGNC Symbol;Acc:HGNC:4835]
68. H2AFZ ENSG00000164032 720.34 1839.24 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
69. HNRNPD ENSG00000138668 718.70 1835.05 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
70. RPS28 ENSG00000233927 712.16 1818.36 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
71. RPL9 ENSG00000163682 711.34 1816.26 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
72. RPS14 ENSG00000164587 681.09 1739.03 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
73. RPL32 ENSG00000144713 668.83 1707.72 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
74. RPL30 ENSG00000156482 667.19 1703.53 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
75. PEG10 ENSG00000242265 654.93 1672.23 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
76. TOMM6 ENSG00000214736 648.38 1655.51 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
77. GAPDH ENSG00000111640 639.39 1632.55 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
78. MORF4L1 ENSG00000185787 635.30 1622.11 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
79. TMSB4X ENSG00000205542 632.85 1615.85 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
80. IFITM2 ENSG00000185201 632.03 1613.76 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
81. RPL26 ENSG00000161970 623.04 1590.81 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
82. COL3A1 ENSG00000168542 621.40 1586.62 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
83. RPL39 ENSG00000198918 620.59 1584.55 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
84. COL1A1 ENSG00000108821 614.04 1567.83 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
85. SRP14 ENSG00000140319 607.50 1551.13 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
86. PCBP1 ENSG00000169564 605.05 1544.87 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
87. CFL1 ENSG00000172757 603.41 1540.69 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
88. UBA52 ENSG00000221983 563.35 1438.40 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
89. RPL22 ENSG00000116251 547.82 1398.75 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
90. HMGB1 ENSG00000189403 538.82 1375.77 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
91. IFITM3 ENSG00000142089 531.46 1356.98 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
92. RPL27A ENSG00000166441 531.46 1356.98 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
93. PGAM1 ENSG00000171314 530.65 1354.91 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
94. STMN1 ENSG00000117632 528.19 1348.63 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
95. FAU ENSG00000149806 525.74 1342.37 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
96. SPOCK2 ENSG00000107742 521.65 1331.93 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:HGNC Symbol;Acc:HGNC:13564]
97. PXDN ENSG00000130508 513.47 1311.04 peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
98. GPC3 ENSG00000147257 510.20 1302.69 glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
99. HNRNPK ENSG00000165119 492.22 1256.78 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
100. ANXA2 ENSG00000182718 477.50 1219.20 annexin A2 [Source:HGNC Symbol;Acc:HGNC:537]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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