Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s57.

Sample reads: 391,644. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 16452.81 42009.71 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 3949.19 10083.65 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPS27 ENSG00000177954 3834.08 9789.73 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. TUBA1B ENSG00000123416 3091.84 7894.54 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
5. ACTB ENSG00000075624 2947.83 7526.83 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
6. SFRP1 ENSG00000104332 2570.51 6563.40 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
7. DLK1 ENSG00000185559 2560.70 6538.35 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
8. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2330.49 5950.55 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
9. PTMA ENSG00000187514 2228.81 5690.92 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
10. RPS12 ENSG00000112306 2204.55 5628.98 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
11. RPL10A ENSG00000198755 2030.08 5183.50 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
12. ACTG1 ENSG00000184009 2025.95 5172.95 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
13. PPIA ENSG00000196262 1999.63 5105.75 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
14. GNAS ENSG00000087460 1857.17 4742.00 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
15. RPL18A ENSG00000105640 1812.78 4628.65 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
16. RPL5 ENSG00000122406 1733.29 4425.69 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
17. RPL15 ENSG00000174748 1616.12 4126.51 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
18. HSP90AB1 ENSG00000096384 1578.95 4031.60 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
19. MDK ENSG00000110492 1532.50 3913.00 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
20. RPL31 ENSG00000071082 1530.95 3909.04 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
21. HNRNPC ENSG00000092199 1492.24 3810.20 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
22. TPT1 ENSG00000133112 1415.84 3615.13 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
23. RPS6 ENSG00000137154 1400.88 3576.93 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
24. RPS20 ENSG00000008988 1393.65 3558.47 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
25. RPS2 ENSG00000140988 1344.61 3433.25 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
26. RPL34 ENSG00000109475 1333.26 3404.27 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
27. RPL37 ENSG00000145592 1322.42 3376.59 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
28. COL1A1 ENSG00000108821 1305.90 3334.41 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
29. MTRNR2L1 ENSG00000256618 1301.26 3322.57 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
30. HIST1H4C ENSG00000197061 1294.03 3304.11 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
31. RPL7A ENSG00000148303, ENSG00000280858 1219.19 3113.01 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
32. RPL13AP20 ENSG00000234498 1157.76 2956.16 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
33. PFN1 ENSG00000108518 1144.86 2923.22 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
34. NGFRAP1 NGFRAP1 1126.79 2877.08
35. RPS23 ENSG00000186468 1126.28 2875.78 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
36. MTRNR2L8 ENSG00000255823 1119.57 2858.65 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
37. RPS15A ENSG00000134419 1115.95 2849.41 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
38. RPL10 ENSG00000147403 1068.46 2728.15 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
39. PEG10 ENSG00000242265 1048.85 2678.08 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
40. RPS5 ENSG00000083845 1045.24 2668.86 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
41. UBB ENSG00000170315 1016.33 2595.04 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
42. RPL11 ENSG00000142676 979.17 2500.16 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
43. RPS8 ENSG00000142937 977.10 2494.87 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
44. RPL35 ENSG00000136942 973.49 2485.66 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
45. COL3A1 ENSG00000168542 970.91 2479.07 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
46. RPL23 ENSG00000125691 931.68 2378.90 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
47. RPL13 ENSG00000167526 914.13 2334.09 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
48. MYL6 ENSG00000092841 907.94 2318.28 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
49. RPS11 ENSG00000142534 875.42 2235.25 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
50. RPS16 ENSG00000105193 842.90 2152.21 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
51. RPS29 ENSG00000213741 842.90 2152.21 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
52. VIM ENSG00000026025 831.03 2121.91 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
53. SERF2 ENSG00000140264 804.70 2054.68 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
54. RPS3A ENSG00000145425 786.64 2008.56 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
55. NPM1 ENSG00000181163 785.09 2004.61 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
56. ITM2C ENSG00000135916 780.96 1994.06 integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
57. RPS13 ENSG00000110700 759.28 1938.70 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
58. HNRNPD ENSG00000138668 733.47 1872.80 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
59. RPLP0 ENSG00000089157 703.02 1795.05 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
60. CAPNS1 ENSG00000126247 701.99 1792.42 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
61. CFL1 ENSG00000172757 696.82 1779.22 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
62. HMGN1 ENSG00000205581 688.05 1756.83 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
63. RPS28 ENSG00000233927 685.99 1751.57 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
64. GAPDH ENSG00000111640 671.53 1714.65 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
65. RPS27A ENSG00000143947 660.69 1686.97 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
66. RPS14 ENSG00000164587 658.11 1680.38 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
67. EIF4G2 ENSG00000110321 651.40 1663.25 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
68. RPL32 ENSG00000144713 643.14 1642.16 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
69. TMSB4X ENSG00000205542 638.50 1630.31 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
70. RPL3 ENSG00000100316 613.21 1565.74 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
71. TOMM6 ENSG00000214736 612.69 1564.41 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
72. SRP14 ENSG00000140319 608.56 1553.86 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
73. UBA52 ENSG00000221983 598.75 1528.82 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
74. H2AFZ ENSG00000164032 598.24 1527.51 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
75. ACTC1 ENSG00000159251 594.62 1518.27 actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]
76. RPL30 ENSG00000156482 586.37 1497.21 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
77. IFITM2 ENSG00000185201 582.24 1486.66 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
78. COL1A2 ENSG00000164692 575.53 1469.53 collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
79. STMN1 ENSG00000117632 564.69 1441.85 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
80. FAU ENSG00000149806 559.52 1428.65 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
81. TPM1 ENSG00000140416 558.49 1426.02 tropomyosin 1 [Source:HGNC Symbol;Acc:HGNC:12010]
82. RPL22 ENSG00000116251 550.23 1404.93 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
83. SPARC ENSG00000113140 545.07 1391.75 secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
84. RPL26 ENSG00000161970 535.78 1368.03 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
85. RPL9 ENSG00000163682 532.17 1358.81 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
86. SRSF2 ENSG00000161547 530.62 1354.86 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
87. GPC3 ENSG00000147257 521.84 1332.44 glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
88. RPL4 ENSG00000174444 519.78 1327.18 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
89. COX7A2 ENSG00000112695 518.23 1323.22 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
90. MORF4L1 ENSG00000185787 517.72 1321.92 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
91. RPL27A ENSG00000166441 515.65 1316.63 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
92. ITM2B ENSG00000136156 503.78 1286.32 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
93. HMGA2 ENSG00000149948 497.07 1269.19 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
94. RPL6 ENSG00000089009 480.55 1227.01 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
95. PCBP1 ENSG00000169564 476.94 1217.79 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
96. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 471.26 1203.29 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
97. MARCKSL1 ENSG00000175130 467.13 1192.74 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
98. CCND2 ENSG00000118971 464.03 1184.83 cyclin D2 [Source:HGNC Symbol;Acc:HGNC:1583]
99. HMGB1 ENSG00000189403 462.49 1180.90 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
100. PFN2 ENSG00000070087 453.71 1158.48 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA