Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s52.

Sample reads: 391,635. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 10684.52 27281.85 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. ACTB ENSG00000075624 4745.93 12118.26 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
3. EEF1A1 ENSG00000156508 4192.50 10705.13 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
4. SFRP1 ENSG00000104332 3549.46 9063.19 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
5. RPS27 ENSG00000177954 3321.36 8480.76 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
6. PTMA ENSG00000187514 2728.47 6966.87 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
7. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2403.90 6138.12 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
8. TUBA1B ENSG00000123416 2288.32 5843.00 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
9. RPS12 ENSG00000112306 2193.88 5601.85 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
10. PPIA ENSG00000196262 2168.67 5537.48 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
11. MDK ENSG00000110492 1985.64 5070.13 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
12. ACTG1 ENSG00000184009 1932.18 4933.63 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
13. GNAS ENSG00000087460 1757.04 4486.43 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
14. RPL5 ENSG00000122406 1735.91 4432.47 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
15. HBE1 ENSG00000213931 1719.36 4390.21 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
16. HNRNPC ENSG00000092199 1693.90 4325.20 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
17. RPL10A ENSG00000198755 1640.95 4190.00 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
18. RPL18A ENSG00000105640 1612.95 4118.51 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
19. RPS20 ENSG00000008988 1599.97 4085.36 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
20. HSP90AB1 ENSG00000096384 1579.60 4033.35 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
21. MTRNR2L1 ENSG00000256618 1511.12 3858.49 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
22. RPS6 ENSG00000137154 1510.10 3855.89 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
23. RPL15 ENSG00000174748 1478.79 3775.94 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
24. RPL37 ENSG00000145592 1395.55 3563.40 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
25. RPL34 ENSG00000109475 1320.96 3372.94 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
26. RPS23 ENSG00000186468 1283.03 3276.09 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
27. MTRNR2L8 ENSG00000255823 1277.68 3262.43 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
28. RPL31 ENSG00000071082 1255.28 3205.23 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
29. RPS2 ENSG00000140988 1196.73 3055.73 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
30. TPT1 ENSG00000133112 1157.27 2954.97 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
31. RPL10 ENSG00000147403 1131.31 2888.69 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
32. RPL35 ENSG00000136942 1122.40 2865.94 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
33. PFN1 ENSG00000108518 1118.83 2856.82 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
34. HIST1H4C ENSG00000197061 1092.61 2789.87 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
35. RPS15A ENSG00000134419 1063.59 2715.77 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
36. SERF2 ENSG00000140264 1063.08 2714.47 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
37. UBB ENSG00000170315 1062.32 2712.53 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
38. RPL11 ENSG00000142676 1031.00 2632.56 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
39. COL1A1 ENSG00000108821 1012.17 2584.47 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
40. ITM2C ENSG00000135916 1001.47 2557.15 integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
41. RPL7A ENSG00000148303, ENSG00000280858 997.66 2547.42 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
42. RPS11 ENSG00000142534 958.71 2447.97 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
43. RPL23 ENSG00000125691 940.38 2401.17 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
44. RPS5 ENSG00000083845 925.87 2364.12 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
45. RPS28 ENSG00000233927 908.05 2318.61 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
46. RPS16 ENSG00000105193 891.76 2277.02 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
47. RPS8 ENSG00000142937 854.59 2182.11 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
48. RPLP0 ENSG00000089157 842.88 2152.21 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
49. NGFRAP1 NGFRAP1 841.10 2147.66
50. NPM1 ENSG00000181163 839.57 2143.76 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
51. MYL6 ENSG00000092841 836.26 2135.31 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
52. RPL13 ENSG00000167526 835.24 2132.70 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
53. HNRNPD ENSG00000138668 814.11 2078.75 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
54. VIM ENSG00000026025 806.98 2060.54 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
55. TMSB4X ENSG00000205542 798.84 2039.76 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
56. RPS27A ENSG00000143947 797.06 2035.21 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
57. COL3A1 ENSG00000168542 791.46 2020.91 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
58. GAPDH ENSG00000111640 775.42 1979.96 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
59. CAPNS1 ENSG00000126247 774.40 1977.35 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
60. HMGN1 ENSG00000205581 772.36 1972.14 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
61. IFITM2 ENSG00000185201 769.82 1965.66 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
62. RPS3A ENSG00000145425 766.25 1956.54 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
63. RPL13AP20 ENSG00000234498 765.49 1954.60 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
64. UBA52 ENSG00000221983 759.63 1939.64 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
65. IFITM3 ENSG00000142089 738.51 1885.71 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
66. HBZ ENSG00000130656 731.63 1868.14 hemoglobin subunit zeta [Source:HGNC Symbol;Acc:HGNC:4835]
67. RPS13 ENSG00000110700 715.85 1827.85 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
68. RPS14 ENSG00000164587 706.43 1803.80 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
69. ITM2B ENSG00000136156 699.81 1786.89 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
70. RPL3 ENSG00000100316 685.55 1750.48 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
71. EIF4G2 ENSG00000110321 682.75 1743.33 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
72. RPS29 ENSG00000213741 670.54 1712.16 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
73. H2AFZ ENSG00000164032 652.97 1667.29 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
74. CFL1 ENSG00000172757 652.46 1665.99 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
75. SRP14 ENSG00000140319 622.93 1590.59 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
76. RPL22 ENSG00000116251 605.62 1546.39 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
77. PXDN ENSG00000130508 601.55 1536.00 peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
78. STMN1 ENSG00000117632 585.51 1495.04 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
79. PCBP1 ENSG00000169564 585.25 1494.38 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
80. HMGB1 ENSG00000189403 577.11 1473.59 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
81. PEG10 ENSG00000242265 577.11 1473.59 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
82. TOMM6 ENSG00000214736 575.58 1469.69 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
83. RPL30 ENSG00000156482 571.00 1457.99 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
84. FAU ENSG00000149806 556.23 1420.28 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
85. RPL4 ENSG00000174444 550.89 1406.64 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
86. MARCKSL1 ENSG00000175130 548.09 1399.49 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
87. RPL32 ENSG00000144713 544.78 1391.04 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
88. RPL27A ENSG00000166441 535.10 1366.32 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
89. SRSF2 ENSG00000161547 535.10 1366.32 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
90. RPL9 ENSG00000163682 528.23 1348.78 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
91. RPL14 ENSG00000188846 523.65 1337.09 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
92. PGAM1 ENSG00000171314 513.98 1312.40 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
93. NUCKS1 ENSG00000069275 506.59 1293.53 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
94. RPL26 ENSG00000161970 488.52 1247.39 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
95. RPL35A ENSG00000182899 486.99 1243.48 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
96. MORF4L1 ENSG00000185787 486.74 1242.84 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
97. HMGA2 ENSG00000149948 484.45 1236.99 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
98. RPL6 ENSG00000089009 483.17 1233.73 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
99. RPLP1 ENSG00000137818 475.03 1212.94 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
100. RPL19 ENSG00000108298 471.21 1203.19 ribosomal protein L19 [Source:HGNC Symbol;Acc:HGNC:10312]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA