Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s51.

Sample reads: 391,649. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 13994.28 35731.69 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. RPS27 ENSG00000177954 6732.42 17189.93 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
3. SFRP1 ENSG00000104332 5889.43 15037.52 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
4. EEF1A1 ENSG00000156508 4544.55 11603.63 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
5. HIST1H4C ENSG00000197061 3693.53 9430.71 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
6. ACTB ENSG00000075624 3533.89 9023.10 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
7. PTMA ENSG00000187514 2933.23 7489.44 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
8. TUBA1B ENSG00000123416 2891.88 7383.86 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
9. RPS12 ENSG00000112306 2752.92 7029.05 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
10. ACTG1 ENSG00000184009 2358.99 6023.22 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
11. PPIA ENSG00000196262 2213.13 5650.80 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
12. RPL37 ENSG00000145592 2148.81 5486.57 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
13. RPL10A ENSG00000198755 2138.48 5460.20 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
14. RPL34 ENSG00000109475 2123.55 5422.07 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
15. RPL5 ENSG00000122406 1999.51 5105.36 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
16. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1969.65 5029.12 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
17. HNRNPC ENSG00000092199 1917.97 4897.17 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
18. RPS20 ENSG00000008988 1874.33 4785.74 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
19. RPL31 ENSG00000071082 1854.80 4735.87 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
20. RPL15 ENSG00000174748 1781.30 4548.21 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
21. MDK ENSG00000110492 1659.56 4237.37 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
22. RPL18A ENSG00000105640 1659.56 4237.37 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
23. TPT1 ENSG00000133112 1651.52 4216.84 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
24. RPS6 ENSG00000137154 1576.87 4026.23 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
25. RPS15A ENSG00000134419 1521.74 3885.47 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
26. RPS23 ENSG00000186468 1409.19 3598.09 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
27. GNAS ENSG00000087460 1375.88 3513.04 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
28. RPS29 ENSG00000213741 1341.43 3425.08 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
29. RPL23 ENSG00000125691 1318.46 3366.43 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
30. RPL10 ENSG00000147403 1308.12 3340.03 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
31. MTRNR2L1 ENSG00000256618 1304.68 3331.25 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
32. MTRNR2L8 ENSG00000255823 1277.11 3260.85 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
33. HBE1 ENSG00000213931 1267.93 3237.41 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
34. HSP90AB1 ENSG00000096384 1267.93 3237.41 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
35. COL3A1 ENSG00000168542 1205.91 3079.06 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
36. RPL7A ENSG00000148303, ENSG00000280858 1204.76 3076.12 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
37. RPS3A ENSG00000145425 1193.28 3046.81 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
38. RPL11 ENSG00000142676 1161.12 2964.70 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
39. UBB ENSG00000170315 1124.37 2870.86 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
40. NPM1 ENSG00000181163 1048.57 2677.32 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
41. RPL13AP20 ENSG00000234498 1045.12 2668.51 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
42. RPL35 ENSG00000136942 1041.68 2659.73 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
43. RPS8 ENSG00000142937 1034.78 2642.11 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
44. RPS5 ENSG00000083845 993.44 2536.56 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
45. RPS2 ENSG00000140988 978.51 2498.44 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
46. RPS16 ENSG00000105193 961.28 2454.44 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
47. PFN1 ENSG00000108518 950.95 2428.07 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
48. RPS27A ENSG00000143947 948.65 2422.19 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
49. TMSB4X ENSG00000205542 924.53 2360.61 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
50. RPS11 ENSG00000142534 919.94 2348.89 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
51. NGFRAP1 NGFRAP1 900.41 2299.02
52. SERF2 ENSG00000140264 882.04 2252.12 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
53. MYL6 ENSG00000092841 870.55 2222.78 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
54. RPS13 ENSG00000110700 860.21 2196.38 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
55. COX7A2 ENSG00000112695 859.07 2193.47 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
56. RPL30 ENSG00000156482 859.07 2193.47 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
57. HMGB1 ENSG00000189403 842.99 2152.41 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
58. HNRNPD ENSG00000138668 814.28 2079.11 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
59. RPS14 ENSG00000164587 800.49 2043.90 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
60. VIM ENSG00000026025 786.71 2008.71 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
61. IFITM2 ENSG00000185201 779.82 1991.12 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
62. H2AFZ ENSG00000164032 778.67 1988.18 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
63. RPS28 ENSG00000233927 777.52 1985.25 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
64. EIF4G2 ENSG00000110321 770.63 1967.65 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
65. HMGN1 ENSG00000205581 752.26 1920.75 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
66. RPLP0 ENSG00000089157 751.11 1917.81 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
67. RPL32 ENSG00000144713 748.81 1911.94 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
68. RPL13 ENSG00000167526 744.22 1900.22 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
69. TOMM6 ENSG00000214736 741.92 1894.35 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
70. RPS7 ENSG00000171863 709.76 1812.23 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
71. RPL9 ENSG00000163682 702.87 1794.64 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
72. RPL26 ENSG00000161970 701.72 1791.71 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
73. RPL22 ENSG00000116251 690.24 1762.39 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
74. GAPDH ENSG00000111640 675.31 1724.27 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
75. SRP14 ENSG00000140319 656.93 1677.34 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
76. STMN1 ENSG00000117632 650.04 1659.75 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
77. ITM2C ENSG00000135916 628.22 1604.04 integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
78. MORF4L1 ENSG00000185787 623.63 1592.32 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
79. PGAM1 ENSG00000171314 614.44 1568.85 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
80. RPL3 ENSG00000100316 604.10 1542.45 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
81. FAU ENSG00000149806 602.95 1539.52 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
82. RPL27A ENSG00000166441 589.17 1504.33 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
83. CFL1 ENSG00000172757 588.02 1501.40 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
84. RPL6 ENSG00000089009 552.42 1410.50 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
85. NUCKS1 ENSG00000069275 545.53 1392.91 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
86. PBX1 ENSG00000185630 539.79 1378.25 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
87. PCBP1 ENSG00000169564 536.34 1369.44 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
88. UBA52 ENSG00000221983 536.34 1369.44 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
89. RPL39 ENSG00000198918 535.19 1366.50 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
90. COL1A1 ENSG00000108821 529.45 1351.85 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
91. ITM2B ENSG00000136156 528.30 1348.91 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
92. HBZ ENSG00000130656 524.86 1340.13 hemoglobin subunit zeta [Source:HGNC Symbol;Acc:HGNC:4835]
93. RPL35A ENSG00000182899 524.86 1340.13 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
94. SUMO2 ENSG00000188612 522.56 1334.26 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
95. HMGA2 ENSG00000149948 511.08 1304.94 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
96. RPS25 ENSG00000118181, ENSG00000280831 509.93 1302.01 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
97. PEG10 ENSG00000242265 506.48 1293.20 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
98. SRSF2 ENSG00000161547 505.33 1290.26 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
99. ZFP36L1 ENSG00000185650 505.33 1290.26 ZFP36 ring finger protein like 1 [Source:HGNC Symbol;Acc:HGNC:1107]
100. PFN2 ENSG00000070087 498.44 1272.67 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA