Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s49.

Sample reads: 391,638. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 8106.75 20699.65 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. RPS27 ENSG00000177954 6054.03 15458.26 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
3. EEF1A1 ENSG00000156508 4928.88 12585.32 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
4. ACTB ENSG00000075624 4594.51 11731.55 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
5. TUBA1B ENSG00000123416 3577.08 9133.66 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
6. PTMA ENSG00000187514 3105.38 7929.23 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
7. ACTG1 ENSG00000184009 2819.50 7199.27 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
8. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2345.75 5989.60 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
9. GNAS ENSG00000087460 2095.09 5349.57 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
10. HSP90AB1 ENSG00000096384 2050.68 5236.17 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
11. MDK ENSG00000110492 2048.13 5229.66 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
12. RPS20 ENSG00000008988 1989.42 5079.75 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
13. RPS12 ENSG00000112306 1925.10 4915.52 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
14. HIST1H4C ENSG00000197061 1921.01 4905.08 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
15. SFRP1 ENSG00000104332 1920.50 4903.77 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
16. HNRNPC ENSG00000092199 1882.73 4807.33 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
17. PPIA ENSG00000196262 1882.22 4806.03 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
18. RPL18A ENSG00000105640 1757.14 4486.65 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
19. RPL5 ENSG00000122406 1664.23 4249.42 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
20. RPL34 ENSG00000109475 1521.29 3884.44 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
21. RPL10A ENSG00000198755 1509.55 3854.46 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
22. RPS6 ENSG00000137154 1434.00 3661.55 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
23. PFN1 ENSG00000108518 1412.05 3605.51 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
24. RPL15 ENSG00000174748 1320.15 3370.85 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
25. RPL31 ENSG00000071082 1315.56 3359.13 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
26. RPL13AP20 ENSG00000234498 1248.68 3188.36 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
27. COL1A1 ENSG00000108821 1224.69 3127.10 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
28. RPL37 ENSG00000145592 1203.76 3073.66 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
29. TPT1 ENSG00000133112 1151.18 2939.40 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
30. RPS2 ENSG00000140988 1114.42 2845.54 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
31. MTRNR2L8 ENSG00000255823 1090.43 2784.29 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
32. RPL35 ENSG00000136942 1087.37 2776.47 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
33. RPS29 ENSG00000213741 1086.86 2775.17 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
34. CFL1 ENSG00000172757 1048.57 2677.40 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
35. RPS23 ENSG00000186468 1048.57 2677.40 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
36. RPL10 ENSG00000147403 1032.23 2635.68 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
37. RPS15A ENSG00000134419 1009.26 2577.03 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
38. RPL23 ENSG00000125691 993.94 2537.91 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
39. RPS5 ENSG00000083845 976.08 2492.31 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
40. RPS16 ENSG00000105193 970.46 2477.96 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
41. RPS3A ENSG00000145425 959.23 2449.28 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
42. COL3A1 ENSG00000168542 942.89 2407.56 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
43. HNRNPD ENSG00000138668 896.95 2290.26 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
44. IFITM2 ENSG00000185201 881.12 2249.84 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
45. HMGA2 ENSG00000149948 874.49 2232.91 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
46. MTRNR2L1 ENSG00000256618 852.03 2175.56 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
47. RPL11 ENSG00000142676 846.41 2161.21 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
48. VIM ENSG00000026025 840.28 2145.56 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
49. RPL7A ENSG00000148303, ENSG00000280858 839.77 2144.26 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
50. RPS8 ENSG00000142937 834.67 2131.23 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
51. HBE1 ENSG00000213931 818.33 2089.51 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
52. UBB ENSG00000170315 816.80 2085.60 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
53. IFITM3 ENSG00000142089 810.16 2068.65 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
54. SERF2 ENSG00000140264 806.59 2059.53 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
55. RPL13 ENSG00000167526 805.57 2056.93 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
56. RPS11 ENSG00000142534 788.21 2012.60 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
57. CAPNS1 ENSG00000126247 767.28 1959.16 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
58. MYL6 ENSG00000092841 754.01 1925.28 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
59. NGFRAP1 NGFRAP1 751.97 1920.07
60. NPM1 ENSG00000181163 733.59 1873.14 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
61. GAPDH ENSG00000111640 730.53 1865.32 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
62. EIF4G2 ENSG00000110321 707.04 1805.34 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
63. TMSB4X ENSG00000205542 698.88 1784.51 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
64. ITM2B ENSG00000136156 695.81 1776.67 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
65. HMGN1 ENSG00000205581 679.99 1736.28 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
66. RPS13 ENSG00000110700 678.46 1732.37 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
67. RPL32 ENSG00000144713 676.92 1728.44 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
68. RPS28 ENSG00000233927 661.61 1689.34 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
69. UBA52 ENSG00000221983 648.85 1656.76 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
70. PKM ENSG00000067225 645.78 1648.92 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
71. RPS27A ENSG00000143947 642.72 1641.11 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
72. PBX1 ENSG00000185630 642.21 1639.81 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
73. MARCKSL1 ENSG00000175130 641.19 1637.20 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
74. PXDN ENSG00000130508 635.06 1621.55 peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
75. STMN1 ENSG00000117632 630.47 1609.83 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
76. PGAM1 ENSG00000171314 621.79 1587.67 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
77. RPLP0 ENSG00000089157 614.64 1569.41 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
78. HMGB1 ENSG00000189403 596.26 1522.48 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
79. RPL22 ENSG00000116251 580.95 1483.39 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
80. NUCKS1 ENSG00000069275 577.89 1475.58 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
81. RPS14 ENSG00000164587 570.74 1457.32 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
82. RPL3 ENSG00000100316 564.10 1440.36 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
83. RPL9 ENSG00000163682 561.55 1433.85 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
84. RPL4 ENSG00000174444 560.53 1431.25 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
85. ITM2C ENSG00000135916 556.45 1420.83 integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
86. FAU ENSG00000149806 555.42 1418.20 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
87. PEG10 ENSG00000242265 550.83 1406.48 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
88. HBZ ENSG00000130656 550.32 1405.18 hemoglobin subunit zeta [Source:HGNC Symbol;Acc:HGNC:4835]
89. ACTC1 ENSG00000159251 539.09 1376.50 actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]
90. SRSF2 ENSG00000161547 539.09 1376.50 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
91. RPL27A ENSG00000166441 532.96 1360.85 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
92. MORF4L1 ENSG00000185787 522.24 1333.48 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
93. SRP14 ENSG00000140319 514.58 1313.92 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
94. H2AFZ ENSG00000164032 511.52 1306.11 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
95. HNRNPM ENSG00000099783 505.40 1290.48 heterogeneous nuclear ribonucleoprotein M [Source:HGNC Symbol;Acc:HGNC:5046]
96. RPL6 ENSG00000089009 498.25 1272.22 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
97. HSPB1 ENSG00000106211 491.61 1255.27 heat shock protein family B (small) member 1 [Source:HGNC Symbol;Acc:HGNC:5246]
98. PCBP1 ENSG00000169564 482.42 1231.80 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
99. HNRNPK ENSG00000165119 479.36 1223.99 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
100. COL1A2 ENSG00000164692 474.77 1212.27 collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA