Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s47.

Sample reads: 391,623. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 9672.73 24699.19 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. RPS27 ENSG00000177954 8146.08 20800.91 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
3. EEF1A1 ENSG00000156508 5065.46 12934.59 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
4. ACTB ENSG00000075624 4465.91 11403.64 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
5. TUBA1B ENSG00000123416 3801.05 9705.93 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
6. HIST1H4C ENSG00000197061 3253.17 8306.93 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
7. ACTG1 ENSG00000184009 2832.02 7231.53 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
8. PTMA ENSG00000187514 2773.53 7082.17 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
9. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2301.69 5877.34 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
10. RPS12 ENSG00000112306 2248.07 5740.42 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
11. HNRNPC ENSG00000092199 2229.54 5693.10 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
12. RPS20 ENSG00000008988 2089.16 5334.64 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
13. RPL34 ENSG00000109475 2045.29 5222.62 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
14. MDK ENSG00000110492 1991.67 5085.70 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
15. SFRP1 ENSG00000104332 1991.67 5085.70 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
16. RPL18A ENSG00000105640 1951.70 4983.64 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
17. PPIA ENSG00000196262 1934.16 4938.85 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
18. GNAS ENSG00000087460 1918.56 4899.02 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
19. RPL31 ENSG00000071082 1769.40 4518.14 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
20. RPL5 ENSG00000122406 1668.02 4259.27 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
21. RPS29 ENSG00000213741 1666.07 4254.29 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
22. RPL13AP20 ENSG00000234498 1658.27 4234.37 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
23. RPL10A ENSG00000198755 1634.87 4174.62 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
24. HSP90AB1 ENSG00000096384 1621.22 4139.76 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
25. RPL37 ENSG00000145592 1558.83 3980.45 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
26. RPL15 ENSG00000174748 1540.31 3933.16 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
27. RPS6 ENSG00000137154 1426.25 3641.91 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
28. RPL35 ENSG00000136942 1383.35 3532.37 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
29. TPT1 ENSG00000133112 1329.73 3395.45 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
30. RPL23 ENSG00000125691 1305.36 3333.22 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
31. PFN1 ENSG00000108518 1276.11 3258.53 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
32. RPS5 ENSG00000083845 1246.87 3183.87 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
33. RPS3A ENSG00000145425 1245.89 3181.36 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
34. MTRNR2L8 ENSG00000255823 1189.35 3036.99 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
35. RPS15A ENSG00000134419 1163.03 2969.78 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
36. RPL10 ENSG00000147403 1155.23 2949.86 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
37. RPS23 ENSG00000186468 1147.43 2929.95 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
38. RPS2 ENSG00000140988 1084.06 2768.13 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
39. MYL6 ENSG00000092841 1029.47 2628.74 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
40. RPS11 ENSG00000142534 1025.57 2618.78 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
41. TMSB4X ENSG00000205542 948.56 2422.14 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
42. RPS16 ENSG00000105193 946.61 2417.16 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
43. UBB ENSG00000170315 933.93 2384.78 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
44. MTRNR2L1 ENSG00000256618 920.28 2349.92 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
45. RPL11 ENSG00000142676 910.54 2325.05 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
46. HMGB1 ENSG00000189403 896.89 2290.20 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
47. COL3A1 ENSG00000168542 886.16 2262.80 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
48. NPM1 ENSG00000181163 867.64 2215.51 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
49. RPS28 ENSG00000233927 863.74 2205.55 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
50. NGFRAP1 NGFRAP1 859.84 2195.59
51. RPS8 ENSG00000142937 849.12 2168.22 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
52. IFITM2 ENSG00000185201 846.19 2160.74 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
53. RPS27A ENSG00000143947 841.32 2148.30 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
54. RPL32 ENSG00000144713 834.50 2130.88 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
55. RPL13 ENSG00000167526 831.57 2123.40 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
56. CFL1 ENSG00000172757 818.90 2091.05 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
57. RPS13 ENSG00000110700 809.15 2066.15 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
58. HMGA2 ENSG00000149948 803.30 2051.22 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
59. HNRNPD ENSG00000138668 794.53 2028.82 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
60. SERF2 ENSG00000140264 789.65 2016.36 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
61. RPL9 ENSG00000163682 779.90 1991.46 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
62. NNAT ENSG00000053438 760.40 1941.67 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
63. RPL22 ENSG00000116251 753.58 1924.26 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
64. HMGN1 ENSG00000205581 745.78 1904.34 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
65. EIF4G2 ENSG00000110321 738.96 1886.92 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
66. RPL7A ENSG00000148303, ENSG00000280858 730.18 1864.51 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
67. VIM ENSG00000026025 711.66 1817.21 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
68. COL1A1 ENSG00000108821 700.94 1789.84 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
69. NUCKS1 ENSG00000069275 692.16 1767.42 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
70. STMN1 ENSG00000117632 683.39 1745.03 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
71. UBA52 ENSG00000221983 650.24 1660.38 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
72. FAU ENSG00000149806 649.27 1657.90 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
73. MORF4L1 ENSG00000185787 638.54 1630.50 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
74. H2AFZ ENSG00000164032 637.57 1628.03 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
75. RPL30 ENSG00000156482 637.57 1628.03 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
76. HNRNPM ENSG00000099783 634.65 1620.57 heterogeneous nuclear ribonucleoprotein M [Source:HGNC Symbol;Acc:HGNC:5046]
77. RPL27A ENSG00000166441 630.75 1610.61 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
78. GAPDH ENSG00000111640 627.82 1603.13 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
79. PGAM1 ENSG00000171314 620.02 1583.21 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
80. ACTC1 ENSG00000159251 617.10 1575.76 actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]
81. RPS14 ENSG00000164587 612.22 1563.30 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
82. SRP14 ENSG00000140319 607.35 1550.86 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
83. PKM ENSG00000067225 597.60 1525.96 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
84. RPLP0 ENSG00000089157 590.78 1508.55 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
85. PBX1 ENSG00000185630 581.03 1483.65 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
86. CAPNS1 ENSG00000126247 577.13 1473.69 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
87. RPL3 ENSG00000100316 569.33 1453.78 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
88. TOMM6 ENSG00000214736 561.53 1433.86 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
89. HSPA8 ENSG00000109971 551.78 1408.96 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
90. PXDN ENSG00000130508 540.08 1379.09 peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
91. PCBP1 ENSG00000169564 533.26 1361.67 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
92. RPS7 ENSG00000171863 532.28 1359.17 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
93. MARCKSL1 ENSG00000175130 531.31 1356.69 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
94. PEG10 ENSG00000242265 531.31 1356.69 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
95. RPL26 ENSG00000161970 530.33 1354.19 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
96. RPL39 ENSG00000198918 529.36 1351.71 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
97. HNRNPK ENSG00000165119 520.58 1329.29 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
98. COX7A2 ENSG00000112695 506.94 1294.46 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
99. ITM2C ENSG00000135916 502.06 1282.00 integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
100. RPL6 ENSG00000089009 493.29 1259.61 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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