Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s15.

Sample reads: 391,647. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 7820.32 19967.76 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. TUBA1B ENSG00000123416 4580.65 11695.85 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
3. EEF1A1 ENSG00000156508 3866.87 9873.35 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
4. ACTB ENSG00000075624 3249.83 8297.85 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
5. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 3094.96 7902.42 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
6. PTMA ENSG00000187514 2805.54 7163.43 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
7. ACTG1 ENSG00000184009 2521.01 6436.94 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
8. RPS27 ENSG00000177954 2396.22 6118.31 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
9. PPIA ENSG00000196262 2377.11 6069.52 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
10. TUBA1A ENSG00000167552 2200.29 5618.04 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
11. GNAS ENSG00000087460 2182.41 5572.39 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
12. NNAT ENSG00000053438 2072.66 5292.16 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
13. RPS12 ENSG00000112306 2057.21 5252.71 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
14. RPL18A ENSG00000105640 1724.30 4402.69 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
15. HNRNPC ENSG00000092199 1662.11 4243.89 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
16. HSP90AB1 ENSG00000096384 1613.74 4120.39 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
17. RPS2 ENSG00000140988 1583.25 4042.54 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
18. RPL5 ENSG00000122406 1579.19 4032.17 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
19. RPL15 ENSG00000174748 1547.48 3951.21 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
20. HIST1H4C ENSG00000197061 1514.15 3866.11 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
21. RPL10A ENSG00000198755 1504.39 3841.19 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
22. RPL31 ENSG00000071082 1465.37 3741.56 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
23. RPL10 ENSG00000147403 1426.35 3641.92 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
24. RPS6 ENSG00000137154 1392.61 3555.78 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
25. RPS23 ENSG00000186468 1375.94 3513.21 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
26. MDK ENSG00000110492 1310.09 3345.08 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
27. RPS20 ENSG00000008988 1299.53 3318.11 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
28. TUBB3 ENSG00000258947 1285.30 3281.78 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
29. RPL13AP20 ENSG00000234498 1234.89 3153.07 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
30. RPL7A ENSG00000148303, ENSG00000280858 1207.25 3082.49 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
31. HBE1 ENSG00000213931 1195.87 3053.44 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
32. RPL13 ENSG00000167526 1183.68 3022.31 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
33. STMN1 ENSG00000117632 1179.61 3011.92 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
34. RPS16 ENSG00000105193 1171.48 2991.16 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
35. RPLP0 ENSG00000089157 1155.22 2949.64 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
36. TMSB4X ENSG00000205542 1154.00 2946.53 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
37. UBB ENSG00000170315 1119.86 2859.36 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
38. GAPDH ENSG00000111640 1095.47 2797.08 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
39. RPL37 ENSG00000145592 1086.12 2773.21 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
40. RPS5 ENSG00000083845 1085.31 2771.14 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
41. CKB ENSG00000166165 1037.75 2649.71 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
42. MTRNR2L1 ENSG00000256618 1035.72 2644.52 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
43. HNRNPD ENSG00000138668 1028.81 2626.88 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
44. RPS15A ENSG00000134419 1023.93 2614.42 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
45. RPS11 ENSG00000142534 982.47 2508.56 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
46. RPL23 ENSG00000125691 951.17 2428.64 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
47. VIM ENSG00000026025 940.19 2400.60 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
48. MTRNR2L8 ENSG00000255823 937.35 2393.35 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
49. RPL35 ENSG00000136942 935.72 2389.19 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
50. RPL34 ENSG00000109475 928.41 2370.53 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
51. RPS13 ENSG00000110700 922.31 2354.95 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
52. RPL11 ENSG00000142676 917.43 2342.49 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
53. PFN1 ENSG00000108518 898.33 2293.72 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
54. PGAM1 ENSG00000171314 883.69 2256.34 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
55. RPS8 ENSG00000142937 872.31 2227.28 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
56. RPS28 ENSG00000233927 865.00 2208.62 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
57. CFL1 ENSG00000172757 851.58 2174.35 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
58. NGFRAP1 NGFRAP1 787.76 2011.40
59. HMGB1 ENSG00000189403 784.92 2004.15 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
60. MYL6 ENSG00000092841 784.92 2004.15 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
61. H2AFZ ENSG00000164032 767.03 1958.47 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
62. TPT1 ENSG00000133112 762.56 1947.06 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
63. SERF2 ENSG00000140264 760.94 1942.92 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
64. PKM ENSG00000067225 750.37 1915.93 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
65. UBA52 ENSG00000221983 731.26 1867.14 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
66. CAPNS1 ENSG00000126247 722.73 1845.36 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
67. STMN2 ENSG00000104435 701.18 1790.34 stathmin 2 [Source:HGNC Symbol;Acc:HGNC:10577]
68. COX7A2 ENSG00000112695 698.74 1784.11 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
69. RPS27A ENSG00000143947 696.71 1778.92 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
70. MAP1B ENSG00000131711 662.57 1691.75 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
71. SRSF2 ENSG00000161547 662.57 1691.75 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
72. TUBB2B ENSG00000137285 654.03 1669.95 tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
73. SRP14 ENSG00000140319 652.00 1664.76 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
74. NPM1 ENSG00000181163 650.78 1661.65 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
75. DPYSL2 ENSG00000092964 638.58 1630.50 dihydropyrimidinase like 2 [Source:HGNC Symbol;Acc:HGNC:3014]
76. CD24 ENSG00000272398 636.15 1624.29 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
77. SST ENSG00000157005 628.83 1605.60 somatostatin [Source:HGNC Symbol;Acc:HGNC:11329]
78. PCBP1 ENSG00000169564 618.26 1578.61 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
79. RPS3A ENSG00000145425 612.16 1563.04 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
80. HBZ ENSG00000130656 610.54 1558.90 hemoglobin subunit zeta [Source:HGNC Symbol;Acc:HGNC:4835]
81. RPL4 ENSG00000174444 602.00 1537.10 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
82. MARCKSL1 ENSG00000175130 595.50 1520.50 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
83. EIF4G2 ENSG00000110321 592.25 1512.20 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
84. SEPW1 586.15 1496.63 selenoprotein W, 1
85. RPL22 ENSG00000116251 575.99 1470.69 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
86. RPL27A ENSG00000166441 567.86 1449.93 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
87. TOMM6 ENSG00000214736 557.69 1423.96 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
88. COTL1 ENSG00000103187 554.85 1416.71 coactosin like F-actin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:18304]
89. RPS29 ENSG00000213741 547.94 1399.06 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
90. RPS14 ENSG00000164587 543.47 1387.65 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
91. YWHAZ ENSG00000164924 541.03 1381.42 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:HGNC Symbol;Acc:HGNC:12855]
92. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 538.59 1375.19 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
93. YBX1 ENSG00000065978 534.12 1363.78 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
94. RPL32 ENSG00000144713 532.90 1360.66 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
95. RBP1 ENSG00000114115 531.68 1357.55 retinol binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9919]
96. ATP5G2 529.24 1351.32 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
97. GABARAP ENSG00000170296 527.61 1347.16 GABA type A receptor-associated protein [Source:HGNC Symbol;Acc:HGNC:4067]
98. MORF4L1 ENSG00000185787 525.99 1343.02 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
99. HMGN1 ENSG00000205581 523.96 1337.84 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
100. RPL3 ENSG00000100316 523.96 1337.84 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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