Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s59.

Sample reads: 391,653. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 8411.92 21477.97 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 3632.42 9274.58 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 3182.14 8124.89 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. SFRP1 ENSG00000104332 2523.07 6442.10 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
5. RPL5 ENSG00000122406 2301.71 5876.91 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
6. RPS20 ENSG00000008988 2276.55 5812.67 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
7. PPIA ENSG00000196262 1926.89 4919.89 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
8. ACTB ENSG00000075624 1906.77 4868.51 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
9. ACTG1 ENSG00000184009 1904.25 4862.08 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
10. RPL15 ENSG00000174748 1833.82 4682.25 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
11. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1748.29 4463.87 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
12. TUBA1B ENSG00000123416 1680.37 4290.45 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
13. MDK ENSG00000110492 1675.34 4277.61 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
14. RPL37 ENSG00000145592 1625.03 4149.15 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
15. RPS6 ENSG00000137154 1511.83 3860.12 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
16. COL3A1 ENSG00000168542 1451.46 3705.98 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
17. GAPDH ENSG00000111640 1408.70 3596.80 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
18. RPL18A ENSG00000105640 1370.96 3500.44 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
19. NGFRAP1 NGFRAP1 1365.93 3487.60
20. RPL10A ENSG00000198755 1363.42 3481.19 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
21. RPL23 ENSG00000125691 1313.11 3352.74 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
22. STMN1 ENSG00000117632 1272.86 3249.97 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
23. RPL9 ENSG00000163682 1252.73 3198.57 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
24. RPS12 ENSG00000112306 1225.06 3127.92 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
25. RPS23 ENSG00000186468 1217.51 3108.64 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
26. GNAS ENSG00000087460 1212.48 3095.80 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
27. MTRNR2L8 ENSG00000255823 1204.94 3076.55 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
28. RPS8 ENSG00000142937 1184.81 3025.15 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
29. RPL34 ENSG00000109475 1177.27 3005.90 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
30. RPS15A ENSG00000134419 1142.05 2915.97 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
31. RPL31 ENSG00000071082 1099.29 2806.79 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
32. RPS27 ENSG00000177954 1079.16 2755.40 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
33. RPS27A ENSG00000143947 1079.16 2755.40 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
34. HSP90AB1 ENSG00000096384 1069.10 2729.71 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
35. RPLP1 ENSG00000137818 1054.01 2691.18 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
36. MTRNR2L1 ENSG00000256618 1036.40 2646.22 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
37. RPS11 ENSG00000142534 1033.88 2639.78 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
38. TPT1 ENSG00000133112 970.99 2479.21 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
39. RPL7A ENSG00000148303, ENSG00000280858 968.48 2472.80 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
40. VIM ENSG00000026025 965.96 2466.36 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
41. RPL14 ENSG00000188846 958.42 2447.11 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
42. RPL13 ENSG00000167526 930.74 2376.44 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
43. RPS14 ENSG00000164587 913.14 2331.50 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
44. RPL37A ENSG00000197756 865.34 2209.45 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
45. RPL13AP20 ENSG00000234498 837.67 2138.80 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
46. NPM1 ENSG00000181163 832.64 2125.96 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
47. COL1A1 ENSG00000108821 822.58 2100.28 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
48. RPS25 ENSG00000118181, ENSG00000280831 792.39 2023.19 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
49. RPL10 ENSG00000147403 782.33 1997.51 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
50. RPS2 ENSG00000140988 779.81 1991.07 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
51. RPS3A ENSG00000145425 779.81 1991.07 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
52. HNRNPC ENSG00000092199 772.27 1971.82 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
53. RPS16 ENSG00000105193 772.27 1971.82 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
54. RPS7 ENSG00000171863 767.24 1958.98 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
55. IFITM3 ENSG00000142089 759.69 1939.70 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
56. RPL3 ENSG00000100316 749.63 1914.01 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
57. RPL35 ENSG00000136942 729.50 1862.62 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
58. COL1A2 ENSG00000164692 726.99 1856.21 collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
59. RPS15 ENSG00000115268 704.35 1798.40 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
60. RPS29 ENSG00000213741 704.35 1798.40 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
61. SPARC ENSG00000113140 704.35 1798.40 secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
62. HNRNPD ENSG00000138668 689.25 1759.85 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
63. RPL6 ENSG00000089009 676.68 1727.75 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
64. RPS21 ENSG00000171858 674.16 1721.32 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
65. HNRNPH1 ENSG00000169045, ENSG00000284254 671.65 1714.91 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
66. IFITM2 ENSG00000185201 666.61 1702.04 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
67. RPL11 ENSG00000142676 664.10 1695.63 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
68. RPL32 ENSG00000144713 661.58 1689.20 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
69. DDX17 ENSG00000100201 659.07 1682.79 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
70. RPS28 ENSG00000233927 651.52 1663.51 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
71. RPL29 ENSG00000162244 633.91 1618.55 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
72. RPS13 ENSG00000110700 621.34 1586.45 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
73. RPLP0 ENSG00000089157 618.82 1580.02 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
74. DLK1 ENSG00000185559 616.30 1573.59 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
75. RPS14P3 616.30 1573.59 ribosomal protein S14 pseudogene 3
76. CFL1 ENSG00000172757 608.76 1554.33 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
77. RBM3 ENSG00000102317 608.76 1554.33 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
78. RPS5 ENSG00000083845 601.21 1535.06 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
79. SERF2 ENSG00000140264 596.18 1522.21 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
80. HMGN1 ENSG00000205581 581.09 1483.68 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
81. H2AFZ ENSG00000164032 568.51 1451.56 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
82. PFN1 ENSG00000108518 560.96 1432.29 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
83. SRSF3 ENSG00000112081 550.90 1406.60 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
84. UBB ENSG00000170315 548.38 1400.17 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
85. RPL26 ENSG00000161970 545.87 1393.76 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
86. RPL38 ENSG00000172809 545.87 1393.76 ribosomal protein L38 [Source:HGNC Symbol;Acc:HGNC:10349]
87. EIF4G2 ENSG00000110321 538.32 1374.48 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
88. HMGA2 ENSG00000149948 538.32 1374.48 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
89. ATP5G2 525.75 1342.39 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
90. CHCHD2 ENSG00000106153 525.75 1342.39 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21645]
91. YWHAE ENSG00000108953, ENSG00000274474 513.17 1310.27 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:HGNC Symbol;Acc:HGNC:12851]
92. RPL39 ENSG00000198918 508.14 1297.42 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
93. RPL18 ENSG00000063177 488.01 1246.03 ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:10310]
94. RPL35A ENSG00000182899 488.01 1246.03 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
95. SRSF2 ENSG00000161547 488.01 1246.03 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
96. KCTD12 ENSG00000178695 482.98 1233.18 potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
97. RPL23A ENSG00000198242 482.98 1233.18 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
98. CCND2 ENSG00000118971 465.37 1188.22 cyclin D2 [Source:HGNC Symbol;Acc:HGNC:1583]
99. HSPA8 ENSG00000109971 462.86 1181.81 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
100. NREP ENSG00000134986 462.86 1181.81 neuronal regeneration related protein [Source:HGNC Symbol;Acc:HGNC:16834]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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