Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s57.

Sample reads: 391,631. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 5980.98 15271.97 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 3537.66 9033.14 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 3415.60 8721.47 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. SFRP1 ENSG00000104332 2775.83 7087.87 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
5. RPS20 ENSG00000008988 2601.16 6641.86 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
6. RPL5 ENSG00000122406 2194.99 5604.74 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
7. ACTB ENSG00000075624 2136.06 5454.26 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
8. ACTG1 ENSG00000184009 2005.58 5121.09 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
9. RPL15 ENSG00000174748 1729.90 4417.17 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
10. PPIA ENSG00000196262 1616.25 4126.97 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
11. RPL13AP20 ENSG00000234498 1572.06 4014.13 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
12. MDK ENSG00000110492 1551.01 3960.38 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
13. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1401.59 3578.85 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
14. RPL18A ENSG00000105640 1380.55 3525.13 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
15. RPL9 ENSG00000163682 1292.16 3299.43 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
16. MTRNR2L8 ENSG00000255823 1281.64 3272.57 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
17. GNAS ENSG00000087460 1279.53 3267.18 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
18. COL3A1 ENSG00000168542 1273.22 3251.07 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
19. NGFRAP1 NGFRAP1 1269.01 3240.32
20. RPS5 ENSG00000083845 1256.38 3208.07 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
21. COL1A1 ENSG00000108821 1231.13 3143.60 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
22. RPS23 ENSG00000186468 1226.92 3132.85 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
23. TUBA1B ENSG00000123416 1184.83 3025.37 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
24. MTRNR2L1 ENSG00000256618 1146.95 2928.65 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
25. RPL10A ENSG00000198755 1117.49 2853.42 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
26. RPL23 ENSG00000125691 1106.96 2826.54 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
27. RPS6 ENSG00000137154 1094.34 2794.31 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
28. DLK1 ENSG00000185559 1077.50 2751.31 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
29. VIM ENSG00000026025 1071.19 2735.20 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
30. HSP90AB1 ENSG00000096384 1060.67 2708.34 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
31. GAPDH ENSG00000111640 1033.31 2638.48 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
32. RPL13 ENSG00000167526 1016.47 2595.48 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
33. RPL37 ENSG00000145592 1014.37 2590.12 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
34. RPL34 ENSG00000109475 1008.05 2573.98 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
35. RPS27A ENSG00000143947 993.32 2536.37 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
36. RPS12 ENSG00000112306 976.49 2493.39 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
37. TPT1 ENSG00000133112 955.44 2439.64 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
38. RPL31 ENSG00000071082 942.81 2407.39 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
39. RPLP1 ENSG00000137818 888.10 2267.69 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
40. RPS11 ENSG00000142534 858.63 2192.45 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
41. IFITM3 ENSG00000142089 856.53 2187.08 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
42. RPS8 ENSG00000142937 850.22 2170.97 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
43. RPS27 ENSG00000177954 839.69 2144.08 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
44. IFITM2 ENSG00000185201 824.96 2106.47 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
45. RPS15A ENSG00000134419 793.39 2025.86 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
46. STMN1 ENSG00000117632 789.19 2015.14 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
47. RPL14 ENSG00000188846 784.98 2004.39 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
48. HBE1 ENSG00000213931 763.93 1950.64 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
49. RPL7A ENSG00000148303, ENSG00000280858 734.47 1875.41 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
50. NPM1 ENSG00000181163 726.05 1853.91 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
51. RPL3 ENSG00000100316 723.95 1848.55 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
52. EIF4G2 ENSG00000110321 719.74 1837.80 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
53. HNRNPC ENSG00000092199 713.42 1821.66 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
54. RPS7 ENSG00000171863 700.80 1789.44 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
55. PFN1 ENSG00000108518 698.69 1784.05 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
56. RPL10 ENSG00000147403 694.48 1773.30 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
57. UBB ENSG00000170315 692.38 1767.94 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
58. SPARC ENSG00000113140 683.96 1746.44 secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
59. DDX17 ENSG00000100201 665.02 1698.08 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
60. RPL37A ENSG00000197756 665.02 1698.08 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
61. RPS16 ENSG00000105193 665.02 1698.08 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
62. RPL11 ENSG00000142676 652.39 1665.83 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
63. RPS25 ENSG00000118181, ENSG00000280831 650.29 1660.47 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
64. RPS2 ENSG00000140988 646.08 1649.72 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
65. CFL1 ENSG00000172757 631.35 1612.10 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
66. RPS3A ENSG00000145425 631.35 1612.10 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
67. RPL35 ENSG00000136942 627.14 1601.35 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
68. SERF2 ENSG00000140264 612.41 1563.74 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
69. ITM2C ENSG00000135916 601.89 1536.88 integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
70. RBM3 ENSG00000102317 587.15 1499.24 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
71. COL1A2 ENSG00000164692 580.84 1483.13 collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
72. RPL32 ENSG00000144713 576.63 1472.38 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
73. RPS28 ENSG00000233927 572.42 1461.63 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
74. HNRNPH1 ENSG00000169045, ENSG00000284254 568.21 1450.88 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
75. RPS15 ENSG00000115268 566.11 1445.52 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
76. RPL6 ENSG00000089009 559.80 1429.41 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
77. RPS29 ENSG00000213741 540.86 1381.04 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
78. HMGN1 ENSG00000205581 538.75 1375.66 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
79. RPS14 ENSG00000164587 538.75 1375.66 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
80. RPL35A ENSG00000182899 534.54 1364.91 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
81. HNRNPD ENSG00000138668 532.44 1359.54 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
82. HNRNPA1 ENSG00000135486 528.23 1348.79 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
83. RPL29 ENSG00000162244 528.23 1348.79 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
84. RPS14P3 524.02 1338.04 ribosomal protein S14 pseudogene 3
85. RPL26 ENSG00000161970 519.81 1327.29 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
86. HSPA8 ENSG00000109971 515.60 1316.54 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
87. NPHS2 ENSG00000116218 505.08 1289.68 NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
88. RPS21 ENSG00000171858 505.08 1289.68 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
89. KCTD12 ENSG00000178695 494.56 1262.82 potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
90. GABARAP ENSG00000170296 492.45 1257.43 GABA type A receptor-associated protein [Source:HGNC Symbol;Acc:HGNC:4067]
91. RPS19 ENSG00000105372 490.35 1252.07 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
92. YWHAE ENSG00000108953, ENSG00000274474 490.35 1252.07 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:HGNC Symbol;Acc:HGNC:12851]
93. ATP5G2 475.62 1214.46 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
94. MARCKS ENSG00000277443 475.62 1214.46 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
95. RPL4 ENSG00000174444 475.62 1214.46 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
96. TRMT112 ENSG00000173113 475.62 1214.46 tRNA methyltransferase subunit 11-2 [Source:HGNC Symbol;Acc:HGNC:26940]
97. RPS13 ENSG00000110700 471.41 1203.71 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
98. RPL38 ENSG00000172809 469.30 1198.32 ribosomal protein L38 [Source:HGNC Symbol;Acc:HGNC:10349]
99. RPL39 ENSG00000198918 465.09 1187.57 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
100. PBX1 ENSG00000185630 456.68 1166.10 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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