Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Human data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Human_35d_slice1, section s56.

Sample reads: 391,636. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 6679.48 17055.33 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 3180.47 8120.99 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 3004.05 7670.52 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. SFRP1 ENSG00000104332 2623.44 6698.67 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
5. ACTG1 ENSG00000184009 2208.52 5639.22 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
6. RPL5 ENSG00000122406 2040.27 5209.61 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
7. ACTB ENSG00000075624 2009.23 5130.35 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
8. RPS20 ENSG00000008988 1891.62 4830.05 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
9. RPL15 ENSG00000174748 1682.53 4296.16 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
10. MDK ENSG00000110492 1669.46 4262.79 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
11. PPIA ENSG00000196262 1597.59 4079.27 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
12. VIM ENSG00000026025 1564.92 3995.85 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
13. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1466.90 3745.57 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
14. RPL18A ENSG00000105640 1430.97 3653.83 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
15. RPS6 ENSG00000137154 1427.70 3645.48 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
16. RPS5 ENSG00000083845 1365.63 3486.99 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
17. GNAS ENSG00000087460 1336.22 3411.89 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
18. RPS23 ENSG00000186468 1292.12 3299.29 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
19. TUBA1B ENSG00000123416 1246.38 3182.50 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
20. RPL23 ENSG00000125691 1200.64 3065.70 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
21. RPL9 ENSG00000163682 1200.64 3065.70 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
22. DLK1 ENSG00000185559 1195.74 3053.19 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
23. RPL37 ENSG00000145592 1177.77 3007.31 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
24. COL3A1 ENSG00000168542 1164.70 2973.94 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
25. GAPDH ENSG00000111640 1158.17 2957.26 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
26. RPS12 ENSG00000112306 1153.27 2944.75 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
27. NGFRAP1 NGFRAP1 1148.37 2932.24
28. MTRNR2L8 ENSG00000255823 1146.73 2928.05 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
29. RPL10A ENSG00000198755 1099.36 2807.10 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
30. HSP90AB1 ENSG00000096384 1079.76 2757.05 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
31. RPL34 ENSG00000109475 1076.49 2748.70 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
32. RPS27A ENSG00000143947 1066.69 2723.68 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
33. MTRNR2L1 ENSG00000256618 1048.72 2677.79 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
34. RPL14 ENSG00000188846 1042.19 2661.12 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
35. COL1A1 ENSG00000108821 1029.12 2627.75 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
36. RPL31 ENSG00000071082 1027.49 2623.58 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
37. RPS11 ENSG00000142534 1002.98 2561.00 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
38. RPS15A ENSG00000134419 965.41 2465.07 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
39. RPL13 ENSG00000167526 955.61 2440.05 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
40. TPT1 ENSG00000133112 924.57 2360.79 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
41. IFITM3 ENSG00000142089 857.60 2189.79 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
42. STMN1 ENSG00000117632 842.90 2152.25 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
43. RPS27 ENSG00000177954 820.03 2093.86 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
44. RPL7A ENSG00000148303, ENSG00000280858 810.23 2068.83 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
45. RPS8 ENSG00000142937 810.23 2068.83 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
46. DDX17 ENSG00000100201 808.59 2064.65 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
47. RPLP1 ENSG00000137818 808.59 2064.65 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
48. RPL13AP20 ENSG00000234498 802.06 2047.97 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
49. RPL10 ENSG00000147403 798.79 2039.62 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
50. HNRNPC ENSG00000092199 775.92 1981.23 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
51. RPS25 ENSG00000118181, ENSG00000280831 771.02 1968.72 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
52. RPL35 ENSG00000136942 738.35 1885.30 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
53. RPL37A ENSG00000197756 725.28 1851.92 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
54. RPL3 ENSG00000100316 708.95 1810.23 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
55. RPS7 ENSG00000171863 708.95 1810.23 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
56. NPM1 ENSG00000181163 707.32 1806.06 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
57. IFITM2 ENSG00000185201 697.51 1781.02 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
58. HBE1 ENSG00000213931 694.25 1772.69 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
59. SPARC ENSG00000113140 694.25 1772.69 secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
60. RPL6 ENSG00000089009 690.98 1764.34 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
61. CFL1 ENSG00000172757 684.45 1747.67 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
62. UBB ENSG00000170315 682.81 1743.48 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
63. RPS2 ENSG00000140988 679.55 1735.16 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
64. RPS29 ENSG00000213741 676.28 1726.81 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
65. RPS14 ENSG00000164587 674.65 1722.65 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
66. RPS3A ENSG00000145425 669.74 1710.11 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
67. SERF2 ENSG00000140264 669.74 1710.11 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
68. RPL11 ENSG00000142676 668.11 1705.95 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
69. PFN1 ENSG00000108518 666.48 1701.78 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
70. RPL32 ENSG00000144713 627.27 1601.67 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
71. RPS16 ENSG00000105193 624.01 1593.34 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
72. EIF4G2 ENSG00000110321 622.37 1589.15 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
73. RPS28 ENSG00000233927 614.21 1568.32 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
74. RPL29 ENSG00000162244 604.40 1543.27 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
75. RPS15 ENSG00000115268 604.40 1543.27 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
76. HSPA8 ENSG00000109971 594.60 1518.25 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
77. KCTD12 ENSG00000178695 591.34 1509.92 potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
78. RBM3 ENSG00000102317 586.44 1497.41 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
79. RPLP0 ENSG00000089157 586.44 1497.41 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
80. RPS21 ENSG00000171858 579.90 1480.71 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
81. RPL4 ENSG00000174444 575.00 1468.20 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
82. HNRNPD ENSG00000138668 573.37 1464.04 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
83. COL1A2 ENSG00000164692 571.73 1459.85 collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
84. RPS14P3 561.93 1434.83 ribosomal protein S14 pseudogene 3
85. RPL26 ENSG00000161970 525.99 1343.06 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
86. RPS13 ENSG00000110700 524.36 1338.90 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
87. HMGN1 ENSG00000205581 521.09 1330.55 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
88. RPL35A ENSG00000182899 511.29 1305.52 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
89. SPINT2 ENSG00000167642 511.29 1305.52 serine peptidase inhibitor, Kunitz type 2 [Source:HGNC Symbol;Acc:HGNC:11247]
90. ITM2C ENSG00000135916 509.66 1301.36 integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
91. CHCHD2 ENSG00000106153 508.03 1297.20 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21645]
92. ATP5G2 503.13 1284.69 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
93. PFN2 ENSG00000070087 494.96 1263.83 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
94. RPL39 ENSG00000198918 490.06 1251.32 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
95. YWHAE ENSG00000108953, ENSG00000274474 475.36 1213.78 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:HGNC Symbol;Acc:HGNC:12851]
96. GABARAP ENSG00000170296 472.09 1205.43 GABA type A receptor-associated protein [Source:HGNC Symbol;Acc:HGNC:4067]
97. MORF4L1 ENSG00000185787 459.02 1172.06 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
98. SRSF2 ENSG00000161547 455.75 1163.71 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
99. H2AFZ ENSG00000164032 450.85 1151.20 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
100. PRKAR1A ENSG00000108946 450.85 1151.20 protein kinase cAMP-dependent type I regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9388]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA