Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s51.

Sample reads: 391,640. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 6910.71 17645.80 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 3529.22 9011.51 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 2879.24 7351.85 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. RPL5 ENSG00000122406 2516.65 6426.01 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
5. RPS20 ENSG00000008988 2328.64 5945.95 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
6. ACTB ENSG00000075624 2197.03 5609.89 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
7. ACTG1 ENSG00000184009 2109.74 5387.01 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
8. RPL15 ENSG00000174748 1835.78 4687.48 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
9. SFRP1 ENSG00000104332 1714.92 4378.88 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
10. PPIA ENSG00000196262 1647.77 4207.41 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
11. RPS6 ENSG00000137154 1560.48 3984.53 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
12. MDK ENSG00000110492 1548.40 3953.68 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
13. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1404.70 3586.76 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
14. MTRNR2L1 ENSG00000256618 1388.59 3545.62 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
15. MTRNR2L8 ENSG00000255823 1290.55 3295.29 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
16. TUBA1B ENSG00000123416 1270.41 3243.86 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
17. RPL10A ENSG00000198755 1247.58 3185.57 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
18. RPS23 ENSG00000186468 1218.04 3110.14 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
19. RPL34 ENSG00000109475 1216.69 3106.70 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
20. HSP90AB1 ENSG00000096384 1209.98 3089.56 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
21. GNAS ENSG00000087460 1197.89 3058.69 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
22. RPL9 ENSG00000163682 1192.52 3044.98 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
23. RPL18A ENSG00000105640 1191.18 3041.56 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
24. RPS5 ENSG00000083845 1158.95 2959.26 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
25. NGFRAP1 NGFRAP1 1142.83 2918.10
26. RPL13AP20 ENSG00000234498 1140.15 2911.26 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
27. VIM ENSG00000026025 1130.75 2887.26 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
28. RPL23 ENSG00000125691 1103.89 2818.67 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
29. GAPDH ENSG00000111640 1095.83 2798.09 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
30. RPL37 ENSG00000145592 1060.91 2708.93 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
31. RPS12 ENSG00000112306 1055.54 2695.21 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
32. RPS8 ENSG00000142937 1040.77 2657.50 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
33. TPT1 ENSG00000133112 1034.06 2640.37 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
34. RPS27A ENSG00000143947 1027.34 2623.21 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
35. RPL7A ENSG00000148303, ENSG00000280858 965.57 2465.49 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
36. RPL31 ENSG00000071082 953.48 2434.61 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
37. RPL13 ENSG00000167526 937.36 2393.45 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
38. RPS27 ENSG00000177954 933.34 2383.19 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
39. RPS15A ENSG00000134419 930.65 2376.32 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
40. COL1A1 ENSG00000108821 925.28 2362.61 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
41. COL3A1 ENSG00000168542 919.91 2348.90 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
42. RPLP1 ENSG00000137818 914.53 2335.16 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
43. RPS11 ENSG00000142534 893.05 2280.31 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
44. STMN1 ENSG00000117632 876.93 2239.15 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
45. IFITM3 ENSG00000142089 856.79 2187.73 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
46. RPL37A ENSG00000197756 840.67 2146.57 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
47. NPM1 ENSG00000181163 816.50 2084.85 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
48. HNRNPC ENSG00000092199 776.21 1981.97 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
49. RPS7 ENSG00000171863 764.13 1951.13 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
50. DDX17 ENSG00000100201 761.44 1944.26 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
51. RPS3A ENSG00000145425 741.30 1892.83 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
52. RPS14 ENSG00000164587 733.24 1872.25 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
53. RPL3 ENSG00000100316 727.87 1858.54 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
54. UBB ENSG00000170315 727.87 1858.54 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
55. EIF4G2 ENSG00000110321 715.78 1827.67 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
56. RPL14 ENSG00000188846 715.78 1827.67 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
57. RPS2 ENSG00000140988 706.38 1803.67 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
58. RPL10 ENSG00000147403 701.01 1789.96 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
59. RPS16 ENSG00000105193 679.52 1735.09 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
60. PFN1 ENSG00000108518 678.18 1731.66 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
61. KCTD12 ENSG00000178695 643.26 1642.50 potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
62. RBM3 ENSG00000102317 628.49 1604.79 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
63. CFL1 ENSG00000172757 625.80 1597.92 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
64. IFITM2 ENSG00000185201 623.12 1591.07 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
65. SERF2 ENSG00000140264 621.78 1587.65 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
66. HNRNPD ENSG00000138668 615.06 1570.49 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
67. RPL35 ENSG00000136942 615.06 1570.49 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
68. ITM2B ENSG00000136156 608.35 1553.36 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
69. RPS25 ENSG00000118181, ENSG00000280831 605.66 1546.49 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
70. CD24 ENSG00000272398 585.52 1495.07 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
71. RPL6 ENSG00000089009 582.83 1488.20 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
72. DLK1 ENSG00000185559 578.80 1477.91 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
73. RPS21 ENSG00000171858 578.80 1477.91 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
74. HNRNPH1 ENSG00000169045, ENSG00000284254 573.43 1464.20 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
75. HSPA8 ENSG00000109971 572.09 1460.77 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
76. RPL11 ENSG00000142676 569.40 1453.91 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
77. RPL26 ENSG00000161970 557.32 1423.06 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
78. RPL32 ENSG00000144713 554.63 1416.19 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
79. RPS28 ENSG00000233927 554.63 1416.19 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
80. RPS29 ENSG00000213741 522.40 1333.90 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
81. RPS15 ENSG00000115268 514.34 1313.32 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
82. MARCKS ENSG00000277443 513.00 1309.89 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
83. RPS14P3 513.00 1309.89 ribosomal protein S14 pseudogene 3
84. HMGN1 ENSG00000205581 510.31 1303.03 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
85. H3F3B ENSG00000132475 508.97 1299.60 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
86. RPL35A ENSG00000182899 504.94 1289.31 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
87. COL1A2 ENSG00000164692 500.91 1279.02 collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
88. RPL29 ENSG00000162244 494.20 1261.89 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
89. RPL38 ENSG00000172809 492.85 1258.44 ribosomal protein L38 [Source:HGNC Symbol;Acc:HGNC:10349]
90. RPL4 ENSG00000174444 484.80 1237.89 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
91. SRSF3 ENSG00000112081 483.45 1234.44 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
92. RPS13 ENSG00000110700 482.11 1231.02 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
93. SPARC ENSG00000113140 476.74 1217.31 secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
94. ATP5G2 475.40 1213.89 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
95. PCBP2 ENSG00000197111 472.71 1207.02 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
96. PRKAR1A ENSG00000108946 472.71 1207.02 protein kinase cAMP-dependent type I regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9388]
97. RPLP0 ENSG00000089157 471.37 1203.60 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
98. GABARAP ENSG00000170296 467.34 1193.31 GABA type A receptor-associated protein [Source:HGNC Symbol;Acc:HGNC:4067]
99. RPL39 ENSG00000198918 467.34 1193.31 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
100. MORF4L1 ENSG00000185787 466.00 1189.88 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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