Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s49.

Sample reads: 391,641. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 7119.64 18179.19 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 3718.88 9495.74 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPS20 ENSG00000008988 3205.89 8185.88 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
4. RPL41 ENSG00000229117 2499.21 6381.45 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
5. ACTB ENSG00000075624 2272.65 5802.95 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
6. ACTG1 ENSG00000184009 2067.22 5278.41 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
7. RPL5 ENSG00000122406 2008.52 5128.53 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
8. RPL15 ENSG00000174748 1555.40 3971.54 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
9. PPIA ENSG00000196262 1519.01 3878.62 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
10. MDK ENSG00000110492 1428.62 3647.82 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
11. RPS6 ENSG00000137154 1364.06 3482.97 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
12. SFRP1 ENSG00000104332 1300.67 3321.11 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
13. RPL13AP20 ENSG00000234498 1276.02 3258.17 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
14. MTRNR2L8 ENSG00000255823 1258.41 3213.21 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
15. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1257.24 3210.22 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
16. RPS23 ENSG00000186468 1210.28 3090.31 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
17. RPL18A ENSG00000105640 1202.06 3069.32 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
18. TUBA1B ENSG00000123416 1182.11 3018.38 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
19. RPL9 ENSG00000163682 1155.11 2949.44 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
20. RPS5 ENSG00000083845 1119.89 2859.51 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
21. GNAS ENSG00000087460 1117.54 2853.51 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
22. RPL10A ENSG00000198755 1110.50 2835.54 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
23. RPS12 ENSG00000112306 1054.15 2691.65 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
24. RPL23 ENSG00000125691 1047.11 2673.68 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
25. MTRNR2L1 ENSG00000256618 1035.37 2643.70 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
26. RPS27 ENSG00000177954 1030.67 2631.70 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
27. RPL37 ENSG00000145592 1013.07 2586.76 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
28. RPL34 ENSG00000109475 993.11 2535.79 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
29. HSP90AB1 ENSG00000096384 950.85 2427.89 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
30. VIM ENSG00000026025 917.98 2343.96 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
31. RPS27A ENSG00000143947 905.07 2310.99 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
32. NGFRAP1 NGFRAP1 899.20 2296.01
33. GAPDH ENSG00000111640 898.03 2293.02 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
34. IFITM3 ENSG00000142089 894.50 2284.00 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
35. RPS11 ENSG00000142534 872.20 2227.06 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
36. RPLP1 ENSG00000137818 859.29 2194.10 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
37. COL1A1 ENSG00000108821 825.24 2107.16 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
38. RPL31 ENSG00000071082 824.07 2104.17 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
39. TPT1 ENSG00000133112 822.90 2101.18 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
40. RPL14 ENSG00000188846 815.85 2083.18 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
41. COL3A1 ENSG00000168542 806.46 2059.20 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
42. HNRNPC ENSG00000092199 806.46 2059.20 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
43. RPL13 ENSG00000167526 802.94 2050.22 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
44. STMN1 ENSG00000117632 797.07 2035.23 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
45. RPS15A ENSG00000134419 778.29 1987.28 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
46. RPS8 ENSG00000142937 755.98 1930.31 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
47. RPL37A ENSG00000197756 750.12 1915.35 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
48. CFL1 ENSG00000172757 736.03 1879.37 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
49. HBE1 ENSG00000213931 732.51 1870.38 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
50. RPL35 ENSG00000136942 706.68 1804.43 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
51. RPS16 ENSG00000105193 679.68 1735.49 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
52. DDX17 ENSG00000100201 663.25 1693.53 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
53. RPL3 ENSG00000100316 660.90 1687.53 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
54. EIF4G2 ENSG00000110321 655.03 1672.54 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
55. UBB ENSG00000170315 653.86 1669.56 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
56. RPS3A ENSG00000145425 652.68 1666.54 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
57. NPM1 ENSG00000181163 643.29 1642.57 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
58. KCTD12 ENSG00000178695 629.20 1606.59 potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
59. RBM3 ENSG00000102317 629.20 1606.59 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
60. IFITM2 ENSG00000185201 623.34 1591.63 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
61. RPS2 ENSG00000140988 622.16 1588.62 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
62. CD24 ENSG00000272398 620.99 1585.63 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
63. RPS14 ENSG00000164587 616.29 1573.63 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
64. SERF2 ENSG00000140264 610.42 1558.64 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
65. COL1A2 ENSG00000164692 606.90 1549.65 collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
66. RPS7 ENSG00000171863 604.55 1543.65 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
67. RPL10 ENSG00000147403 602.21 1537.67 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
68. RPL7A ENSG00000148303, ENSG00000280858 602.21 1537.67 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
69. HNRNPH1 ENSG00000169045, ENSG00000284254 585.77 1495.70 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
70. HNRNPD ENSG00000138668 581.08 1483.72 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
71. PBX1 ENSG00000185630 579.90 1480.71 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
72. RPS25 ENSG00000118181, ENSG00000280831 575.21 1468.73 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
73. ITM2C ENSG00000135916 558.77 1426.76 integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
74. RPL6 ENSG00000089009 557.60 1423.77 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
75. PFN1 ENSG00000108518 555.25 1417.77 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
76. RPL11 ENSG00000142676 554.08 1414.78 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
77. RPS28 ENSG00000233927 539.99 1378.80 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
78. RPS29 ENSG00000213741 539.99 1378.80 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
79. RPS21 ENSG00000171858 530.60 1354.83 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
80. MARCKS ENSG00000277443 521.21 1330.85 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
81. HSPA8 ENSG00000109971 518.86 1324.85 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
82. RPS15 ENSG00000115268 515.34 1315.86 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
83. PCBP2 ENSG00000197111 505.95 1291.89 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
84. PXDN ENSG00000130508 502.42 1282.87 peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
85. H3F3B ENSG00000132475 498.90 1273.88 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
86. SPARC ENSG00000113140 487.16 1243.91 secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
87. HMGN1 ENSG00000205581 474.25 1210.94 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
88. RPL32 ENSG00000144713 474.25 1210.94 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
89. ITM2B ENSG00000136156 473.08 1207.96 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
90. RPL4 ENSG00000174444 467.21 1192.97 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
91. RPL39 ENSG00000198918 464.86 1186.97 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
92. SRSF3 ENSG00000112081 454.30 1160.00 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
93. SET ENSG00000119335 451.95 1154.00 SET nuclear proto-oncogene [Source:HGNC Symbol;Acc:HGNC:10760]
94. TPM4 ENSG00000167460 449.60 1148.00 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
95. RPS14P3 448.43 1145.02 ribosomal protein S14 pseudogene 3
96. RPL38 ENSG00000172809 447.25 1142.00 ribosomal protein L38 [Source:HGNC Symbol;Acc:HGNC:10349]
97. RPL35A ENSG00000182899 443.73 1133.01 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
98. ATP5G2 440.21 1124.03 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
99. FTH1 ENSG00000167996 433.17 1106.05 ferritin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:3976]
100. HNRNPA1 ENSG00000135486 433.17 1106.05 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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