Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s48.

Sample reads: 391,638. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 7204.40 18395.73 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 3269.71 8348.88 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 2665.18 6805.28 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. RPS20 ENSG00000008988 2198.64 5614.01 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
5. ACTB ENSG00000075624 2122.42 5419.39 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
6. RPL5 ENSG00000122406 2086.94 5328.80 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
7. ACTG1 ENSG00000184009 1998.89 5103.97 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
8. MDK ENSG00000110492 1734.73 4429.46 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
9. PPIA ENSG00000196262 1578.34 4030.14 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
10. RPL15 ENSG00000174748 1491.61 3808.68 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
11. RPS6 ENSG00000137154 1440.35 3677.79 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
12. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1424.58 3637.53 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
13. MTRNR2L1 ENSG00000256618 1299.74 3318.76 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
14. RPL18A ENSG00000105640 1283.97 3278.49 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
15. SFRP1 ENSG00000104332 1265.57 3231.51 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
16. RPS5 ENSG00000083845 1256.37 3208.02 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
17. RPL9 ENSG00000163682 1220.88 3117.40 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
18. GNAS ENSG00000087460 1213.00 3097.28 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
19. TUBA1B ENSG00000123416 1203.80 3073.79 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
20. MTRNR2L8 ENSG00000255823 1198.54 3060.35 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
21. RPS23 ENSG00000186468 1186.72 3030.17 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
22. RPL23 ENSG00000125691 1167.00 2979.82 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
23. VIM ENSG00000026025 1113.12 2842.24 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
24. RPS12 ENSG00000112306 1098.66 2805.32 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
25. RPL10A ENSG00000198755 1052.67 2687.89 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
26. HSP90AB1 ENSG00000096384 1000.10 2553.66 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
27. GAPDH ENSG00000111640 996.16 2543.60 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
28. RPS11 ENSG00000142534 985.64 2516.74 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
29. RPS27A ENSG00000143947 980.39 2503.33 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
30. RPL37 ENSG00000145592 977.76 2496.61 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
31. NGFRAP1 NGFRAP1 961.99 2456.35
32. RPL31 ENSG00000071082 917.31 2342.26 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
33. RPL34 ENSG00000109475 913.36 2332.18 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
34. IFITM3 ENSG00000142089 906.79 2315.40 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
35. STMN1 ENSG00000117632 904.16 2308.68 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
36. TPT1 ENSG00000133112 900.22 2298.62 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
37. RPL13 ENSG00000167526 854.22 2181.17 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
38. RPLP1 ENSG00000137818 831.88 2124.12 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
39. RPS15A ENSG00000134419 827.94 2114.06 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
40. RPL14 ENSG00000188846 820.06 2093.94 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
41. RPS8 ENSG00000142937 802.97 2050.31 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
42. RPL7A ENSG00000148303, ENSG00000280858 791.14 2020.10 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
43. RPL10 ENSG00000147403 767.49 1959.71 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
44. COL1A1 ENSG00000108821 755.66 1929.50 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
45. DDX17 ENSG00000100201 714.92 1825.48 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
46. RPL3 ENSG00000100316 710.98 1815.42 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
47. UBB ENSG00000170315 704.41 1798.64 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
48. RPS27 ENSG00000177954 697.84 1781.87 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
49. COL3A1 ENSG00000168542 691.27 1765.09 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
50. HNRNPC ENSG00000092199 688.64 1758.37 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
51. RPL35 ENSG00000136942 684.69 1748.29 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
52. IFITM2 ENSG00000185201 676.81 1728.17 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
53. RPS3A ENSG00000145425 674.18 1721.45 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
54. RPL37A ENSG00000197756 671.55 1714.74 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
55. RPL6 ENSG00000089009 658.41 1681.19 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
56. RPS2 ENSG00000140988 651.84 1664.41 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
57. CFL1 ENSG00000172757 647.90 1654.35 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
58. RPS7 ENSG00000171863 636.07 1624.14 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
59. RPS25 ENSG00000118181, ENSG00000280831 628.18 1604.00 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
60. SERF2 ENSG00000140264 621.61 1587.22 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
61. RPL13AP20 ENSG00000234498 620.30 1583.88 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
62. RPL11 ENSG00000142676 608.47 1553.67 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
63. RPS16 ENSG00000105193 607.16 1550.32 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
64. RPS21 ENSG00000171858 605.84 1546.95 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
65. RBM3 ENSG00000102317 604.53 1543.61 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
66. RPS14 ENSG00000164587 591.39 1510.06 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
67. RPS28 ENSG00000233927 590.07 1506.69 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
68. RPLP0 ENSG00000089157 586.13 1496.63 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
69. NPM1 ENSG00000181163 579.56 1479.85 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
70. EIF4G2 ENSG00000110321 578.24 1476.48 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
71. RPS29 ENSG00000213741 578.24 1476.48 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
72. CD24 ENSG00000272398 575.62 1469.79 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
73. ITM2C ENSG00000135916 565.10 1442.93 integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
74. PFN1 ENSG00000108518 554.59 1416.09 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
75. RPS13 ENSG00000110700 554.59 1416.09 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
76. HNRNPH1 ENSG00000169045, ENSG00000284254 546.70 1395.95 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
77. RPL29 ENSG00000162244 538.82 1375.82 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
78. RPS15 ENSG00000115268 536.19 1369.11 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
79. SOX4 ENSG00000124766 534.88 1365.76 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
80. HNRNPD ENSG00000138668 530.93 1355.68 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
81. PBX1 ENSG00000185630 525.68 1342.27 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
82. RPL32 ENSG00000144713 525.68 1342.27 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
83. SET ENSG00000119335 521.73 1332.19 SET nuclear proto-oncogene [Source:HGNC Symbol;Acc:HGNC:10760]
84. HSPA8 ENSG00000109971 512.53 1308.70 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
85. COL1A2 ENSG00000164692 509.91 1302.01 collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
86. KCTD12 ENSG00000178695 504.65 1288.57 potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
87. MARCKS ENSG00000277443 486.25 1241.59 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
88. RPL4 ENSG00000174444 482.31 1231.53 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
89. RPL35A ENSG00000182899 479.68 1224.82 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
90. RPL26 ENSG00000161970 467.85 1194.61 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
91. H3F3B ENSG00000132475 463.91 1184.55 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
92. SRP14 ENSG00000140319 457.34 1167.77 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
93. TPM4 ENSG00000167460 457.34 1167.77 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
94. ATP5G2 453.40 1157.71 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
95. HMGN1 ENSG00000205581 442.88 1130.85 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
96. RPL39 ENSG00000198918 438.94 1120.79 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
97. KCNQ1OT1 ENSG00000269821 435.00 1110.73 KCNQ1 opposite strand/antisense transcript 1 [Source:HGNC Symbol;Acc:HGNC:6295]
98. ITM2B ENSG00000136156 429.74 1097.30 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
99. PFN2 ENSG00000070087 429.74 1097.30 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
100. SPARC ENSG00000113140 423.17 1080.52 secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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