Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s47.

Sample reads: 391,635. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 8517.36 21748.61 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 3697.31 9440.88 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPS20 ENSG00000008988 2995.84 7649.71 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
4. RPL41 ENSG00000229117 2647.92 6761.32 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
5. ACTB ENSG00000075624 2367.71 6045.82 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
6. ACTG1 ENSG00000184009 2237.95 5714.48 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
7. RPL5 ENSG00000122406 2160.84 5517.59 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
8. MDK ENSG00000110492 1816.69 4638.82 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
9. RPL15 ENSG00000174748 1530.83 3908.89 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
10. RPL18A ENSG00000105640 1466.89 3745.62 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
11. PPIA ENSG00000196262 1461.25 3731.22 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
12. SFRP1 ENSG00000104332 1419.87 3625.56 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
13. RPS6 ENSG00000137154 1378.50 3519.92 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
14. TUBA1B ENSG00000123416 1378.50 3519.92 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
15. RPL13AP20 ENSG00000234498 1320.20 3371.06 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
16. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1318.32 3366.26 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
17. RPL9 ENSG00000163682 1286.35 3284.62 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
18. RPS5 ENSG00000083845 1248.74 3188.59 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
19. RPL10A ENSG00000198755 1231.81 3145.36 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
20. RPL23 ENSG00000125691 1216.77 3106.96 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
21. RPS23 ENSG00000186468 1203.60 3073.33 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
22. NGFRAP1 NGFRAP1 1162.23 2967.69
23. RPS27 ENSG00000177954 1160.35 2962.89 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
24. MTRNR2L8 ENSG00000255823 1115.21 2847.63 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
25. RPL37 ENSG00000145592 1102.05 2814.02 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
26. RPS11 ENSG00000142534 1094.52 2794.80 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
27. GNAS ENSG00000087460 1058.79 2703.56 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
28. RPS27A ENSG00000143947 1045.63 2669.96 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
29. RPS12 ENSG00000112306 1032.46 2636.33 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
30. RPL34 ENSG00000109475 1015.54 2593.13 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
31. GAPDH ENSG00000111640 1011.78 2583.52 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
32. RPL31 ENSG00000071082 983.57 2511.49 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
33. HSP90AB1 ENSG00000096384 964.76 2463.46 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
34. VIM ENSG00000026025 957.24 2444.26 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
35. RPLP1 ENSG00000137818 953.48 2434.66 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
36. MTRNR2L1 ENSG00000256618 927.15 2367.43 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
37. STMN1 ENSG00000117632 882.01 2252.16 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
38. RPL13 ENSG00000167526 874.49 2232.96 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
39. IFITM3 ENSG00000142089 866.97 2213.76 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
40. RPL14 ENSG00000188846 865.09 2208.96 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
41. RPS15A ENSG00000134419 829.36 2117.73 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
42. HNRNPC ENSG00000092199 819.95 2093.70 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
43. TPT1 ENSG00000133112 804.91 2055.29 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
44. RPL35 ENSG00000136942 797.39 2036.09 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
45. RPS8 ENSG00000142937 771.06 1968.86 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
46. COL3A1 ENSG00000168542 763.53 1949.63 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
47. RPL37A ENSG00000197756 763.53 1949.63 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
48. DDX17 ENSG00000100201 761.65 1944.83 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
49. RPS25 ENSG00000118181, ENSG00000280831 729.68 1863.20 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
50. IFITM2 ENSG00000185201 725.92 1853.60 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
51. EIF4G2 ENSG00000110321 709.00 1810.39 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
52. RPL10 ENSG00000147403 709.00 1810.39 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
53. CFL1 ENSG00000172757 705.23 1800.77 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
54. RPS3A ENSG00000145425 695.83 1776.76 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
55. RPS14 ENSG00000164587 673.26 1719.13 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
56. RPS29 ENSG00000213741 661.98 1690.33 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
57. HNRNPH1 ENSG00000169045, ENSG00000284254 652.58 1666.33 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
58. RBM3 ENSG00000102317 646.94 1651.93 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
59. RPL3 ENSG00000100316 631.89 1613.50 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
60. RPS7 ENSG00000171863 631.89 1613.50 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
61. RPS2 ENSG00000140988 622.49 1589.49 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
62. KCTD12 ENSG00000178695 616.85 1575.09 potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
63. RPS28 ENSG00000233927 614.96 1570.27 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
64. RPL6 ENSG00000089009 613.08 1565.47 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
65. UBB ENSG00000170315 613.08 1565.47 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
66. PFN1 ENSG00000108518 609.32 1555.87 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
67. COL1A1 ENSG00000108821 601.80 1536.66 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
68. RPS21 ENSG00000171858 594.28 1517.46 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
69. RPS15 ENSG00000115268 588.64 1503.06 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
70. PBX1 ENSG00000185630 582.99 1488.63 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
71. HNRNPD ENSG00000138668 581.11 1483.83 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
72. RPS16 ENSG00000105193 571.71 1459.83 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
73. NPM1 ENSG00000181163 566.07 1445.43 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
74. PXDN ENSG00000130508 566.07 1445.43 peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
75. HSPA8 ENSG00000109971 560.43 1431.03 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
76. RPL32 ENSG00000144713 543.50 1387.80 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
77. HMGN1 ENSG00000205581 532.22 1358.99 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
78. RPL7A ENSG00000148303, ENSG00000280858 530.34 1354.19 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
79. RPL11 ENSG00000142676 526.58 1344.59 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
80. TPM4 ENSG00000167460 526.58 1344.59 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
81. CD24 ENSG00000272398 522.81 1334.97 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
82. MARCKS ENSG00000277443 511.53 1306.16 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
83. SERF2 ENSG00000140264 505.89 1291.76 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
84. SRSF3 ENSG00000112081 502.13 1282.16 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
85. RPL39 ENSG00000198918 492.72 1258.13 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
86. SET ENSG00000119335 492.72 1258.13 SET nuclear proto-oncogene [Source:HGNC Symbol;Acc:HGNC:10760]
87. RPL35A ENSG00000182899 488.96 1248.53 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
88. TRMT112 ENSG00000173113 485.20 1238.93 tRNA methyltransferase subunit 11-2 [Source:HGNC Symbol;Acc:HGNC:26940]
89. UBA52 ENSG00000221983 481.44 1229.33 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
90. PCBP2 ENSG00000197111 479.56 1224.53 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
91. COL1A2 ENSG00000164692 477.68 1219.73 collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
92. ITM2B ENSG00000136156 473.92 1210.13 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
93. NREP ENSG00000134986 466.40 1190.93 neuronal regeneration related protein [Source:HGNC Symbol;Acc:HGNC:16834]
94. RPS13 ENSG00000110700 462.63 1181.30 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
95. KCNQ1OT1 ENSG00000269821 455.11 1162.10 KCNQ1 opposite strand/antisense transcript 1 [Source:HGNC Symbol;Acc:HGNC:6295]
96. H3F3B ENSG00000132475 451.35 1152.50 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
97. RPL26 ENSG00000161970 451.35 1152.50 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
98. HNRNPA1 ENSG00000135486 449.47 1147.70 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
99. USP22 ENSG00000124422 443.83 1133.30 ubiquitin specific peptidase 22 [Source:HGNC Symbol;Acc:HGNC:12621]
100. RPLP0 ENSG00000089157 434.42 1109.27 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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