Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s45.

Sample reads: 391,643. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 9243.32 23601.40 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 3858.49 9852.06 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 2749.54 7020.53 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. ACTB ENSG00000075624 2620.06 6689.92 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
5. RPS20 ENSG00000008988 2467.73 6300.97 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
6. RPL5 ENSG00000122406 2414.41 6164.83 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
7. ACTG1 ENSG00000184009 2374.81 6063.71 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
8. MDK ENSG00000110492 1962.00 5009.67 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
9. RPL15 ENSG00000174748 1876.69 4791.84 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
10. PPIA ENSG00000196262 1709.13 4364.00 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
11. TUBA1B ENSG00000123416 1660.39 4239.55 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
12. RPS5 ENSG00000083845 1558.33 3978.96 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
13. RPS6 ENSG00000137154 1445.60 3691.12 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
14. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1395.33 3562.76 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
15. RPL18A ENSG00000105640 1363.34 3481.08 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
16. RPL9 ENSG00000163682 1340.50 3422.76 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
17. RPS23 ENSG00000186468 1331.36 3399.42 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
18. RPS12 ENSG00000112306 1317.65 3364.42 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
19. RPL13AP20 ENSG00000234498 1314.60 3356.63 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
20. SFRP1 ENSG00000104332 1268.90 3239.94 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
21. GNAS ENSG00000087460 1256.71 3208.82 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
22. RPL23 ENSG00000125691 1256.71 3208.82 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
23. RPL10A ENSG00000198755 1241.48 3169.93 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
24. RPL37 ENSG00000145592 1241.48 3169.93 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
25. VIM ENSG00000026025 1214.06 3099.92 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
26. RPL31 ENSG00000071082 1195.78 3053.24 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
27. MTRNR2L8 ENSG00000255823 1192.74 3045.48 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
28. NGFRAP1 NGFRAP1 1147.04 2928.79
29. HSP90AB1 ENSG00000096384 1143.99 2921.00 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
30. MTRNR2L1 ENSG00000256618 1133.33 2893.78 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
31. RPS27A ENSG00000143947 1133.33 2893.78 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
32. GAPDH ENSG00000111640 1107.43 2827.65 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
33. RPLP1 ENSG00000137818 1102.86 2815.98 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
34. STMN1 ENSG00000117632 1075.44 2745.97 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
35. RPL34 ENSG00000109475 1072.40 2738.21 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
36. RPS11 ENSG00000142534 1055.64 2695.41 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
37. TPT1 ENSG00000133112 1038.88 2652.62 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
38. RPS27 ENSG00000177954 1023.65 2613.73 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
39. RPL13 ENSG00000167526 1016.03 2594.28 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
40. RPS8 ENSG00000142937 1014.51 2590.40 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
41. RPL14 ENSG00000188846 984.05 2512.62 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
42. RPS15A ENSG00000134419 926.16 2364.81 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
43. RPL7A ENSG00000148303, ENSG00000280858 912.45 2329.80 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
44. CFL1 ENSG00000172757 857.61 2189.78 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
45. RPL37A ENSG00000197756 846.95 2162.56 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
46. IFITM2 ENSG00000185201 828.67 2115.88 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
47. RPL6 ENSG00000089009 775.35 1979.74 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
48. RPL10 ENSG00000147403 766.21 1956.40 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
49. RPS16 ENSG00000105193 764.69 1952.52 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
50. HNRNPH1 ENSG00000169045, ENSG00000284254 738.80 1886.41 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
51. COL3A1 ENSG00000168542 735.75 1878.62 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
52. IFITM3 ENSG00000142089 728.13 1859.17 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
53. HNRNPC ENSG00000092199 726.61 1855.29 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
54. NPM1 ENSG00000181163 720.52 1839.74 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
55. RPL11 ENSG00000142676 718.99 1835.83 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
56. RPS25 ENSG00000118181, ENSG00000280831 715.95 1828.07 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
57. PFN1 ENSG00000108518 714.42 1824.16 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
58. HNRNPD ENSG00000138668 712.90 1820.28 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
59. UBB ENSG00000170315 711.38 1816.40 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
60. RPL35 ENSG00000136942 705.28 1800.82 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
61. RPS21 ENSG00000171858 696.14 1777.49 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
62. DDX17 ENSG00000100201 688.53 1758.06 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
63. RPL3 ENSG00000100316 687.00 1754.15 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
64. RPS3A ENSG00000145425 682.43 1742.48 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
65. RPS2 ENSG00000140988 680.91 1738.60 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
66. RPS7 ENSG00000171863 653.49 1668.59 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
67. RPL32 ENSG00000144713 638.26 1629.70 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
68. RPS14 ENSG00000164587 636.74 1625.82 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
69. HMGN1 ENSG00000205581 630.64 1610.24 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
70. RPS15 ENSG00000115268 609.32 1555.81 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
71. RPS28 ENSG00000233927 607.79 1551.90 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
72. MARCKS ENSG00000277443 598.65 1528.56 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
73. H3F3B ENSG00000132475 597.13 1524.68 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
74. RBM3 ENSG00000102317 581.90 1485.79 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
75. COL1A1 ENSG00000108821 571.23 1458.55 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
76. EIF4G2 ENSG00000110321 565.14 1443.00 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
77. FTH1 ENSG00000167996 562.09 1435.21 ferritin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:3976]
78. RPL26 ENSG00000161970 562.09 1435.21 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
79. TPM4 ENSG00000167460 559.05 1427.45 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
80. RPLP0 ENSG00000089157 557.52 1423.54 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
81. HSPA8 ENSG00000109971 554.48 1415.78 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
82. SRP14 ENSG00000140319 554.48 1415.78 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
83. KCTD12 ENSG00000178695 551.43 1407.99 potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
84. RPS13 ENSG00000110700 549.91 1404.11 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
85. CD24 ENSG00000272398 542.29 1384.65 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
86. RPL29 ENSG00000162244 540.77 1380.77 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
87. RPS29 ENSG00000213741 537.72 1372.99 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
88. H2AFZ ENSG00000164032 530.10 1353.53 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
89. TRMT112 ENSG00000173113 527.06 1345.77 tRNA methyltransferase subunit 11-2 [Source:HGNC Symbol;Acc:HGNC:26940]
90. SERF2 ENSG00000140264 525.53 1341.86 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
91. PBX1 ENSG00000185630 524.01 1337.98 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
92. PCBP2 ENSG00000197111 524.01 1337.98 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
93. RPS14P3 524.01 1337.98 ribosomal protein S14 pseudogene 3
94. HNRNPA1 ENSG00000135486 516.40 1318.55 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
95. HMGA2 ENSG00000149948 513.35 1310.76 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
96. PFN2 ENSG00000070087 501.16 1279.64 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
97. SRSF2 ENSG00000161547 499.64 1275.75 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
98. SRSF3 ENSG00000112081 499.64 1275.75 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
99. COL1A2 ENSG00000164692 488.98 1248.54 collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
100. RPL38 ENSG00000172809 478.31 1221.29 ribosomal protein L38 [Source:HGNC Symbol;Acc:HGNC:10349]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA