Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_posterior_slice_3, section s57.

Sample reads: 124,243. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 4961.54 39934.24
2. MT-CO3 MT-CO3 4556.51 36674.26
3. MT-ND5 MT-ND5 3645.21 29339.42
4. gga-mir-3533 ENSGALG00000027736 3138.93 25264.49 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
5. MT-CYB MT-CYB 2733.91 22004.59
6. EEF1A EEF1A 2430.14 19559.61
7. MT-ND1 MT-ND1 2227.63 17929.66
8. gga-mir-3527 gga-mir-3527 1822.61 14669.75
9. MT-CO1 MT-CO1 1518.84 12224.78
10. PPIA ENSGALG00000028600 1215.07 9779.81 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
11. MT-ND4 MT-ND4 1113.81 8964.79
12. RPS12 ENSGALG00000013990 1113.81 8964.79 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
13. MT-ND3 MT-ND3 911.30 7334.84
14. GAPDH ENSGALG00000014442 810.05 6519.90 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
15. RPS6 ENSGALG00000015082 810.05 6519.90 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
16. RPL15 ENSGALG00000011290 708.79 5704.88 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
17. RPS15 ENSGALG00000015195 708.79 5704.88 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
18. HMGN5 ENSGALG00000007131 607.54 4889.94 high mobility group nucleosome binding domain 5, transcript variant X1
19. NME2 ENSGALG00000002932 607.54 4889.94 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
20. RPL26 RPL26 607.54 4889.94
21. RPS3 ENSGALG00000017330 607.54 4889.94 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
22. RPL6 ENSGALG00000004818 506.28 4074.93 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
23. RPS23 ENSGALG00000015617 506.28 4074.93 ribosomal protein S23
24. RPS3A ENSGALG00000010077 506.28 4074.93 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
25. CRHOA CRHOA 405.02 3259.91
26. EIF2S3 ENSGALG00000016340 405.02 3259.91 eukaryotic translation initiation factor 2 subunit gamma [Source:NCBI gene;Acc:418597]
27. EIF4A2 ENSGALG00000008684 405.02 3259.91 eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
28. ENSGALG00000002696 ENSGALG00000002696 405.02 3259.91
29. ENSGALG00000028992 ENSGALG00000028992 405.02 3259.91
30. EPFIP1L ENSGALG00000007683 405.02 3259.91 re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
31. KRT19 ENSGALG00000019719 405.02 3259.91 keratin 19 [Source:NCBI gene;Acc:395861]
32. MDK ENSGALG00000008367 405.02 3259.91 midkine [Source:NCBI gene;Acc:423196]
33. RPL10A ENSGALG00000002644 405.02 3259.91 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
34. RPL27A ENSGALG00000005948 405.02 3259.91 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
35. RPL7A ENSGALG00000003197 405.02 3259.91 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
36. RPL8 ENSGALG00000016232 405.02 3259.91 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
37. RPS15A ENSGALG00000006771 405.02 3259.91 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
38. SHFM1 SHFM1 405.02 3259.91
39. TBCD ENSGALG00000001503 405.02 3259.91 tubulin folding cofactor D [Source:NCBI gene;Acc:417334]
40. TMSB4X ENSGALG00000026383 405.02 3259.91 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
41. ACOT7 ENSGALG00000000652 303.77 2444.97 acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
42. ACTG1_1 ENSGALG00000001381 303.77 2444.97 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
43. ANP32E ENSGALG00000039891 303.77 2444.97 acidic nuclear phosphoprotein 32 family member E [Source:NCBI gene;Acc:426109]
44. ARGLU1 ENSGALG00000016855 303.77 2444.97 arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
45. ARHGAP32 ENSGALG00000043511 303.77 2444.97 Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
46. ATP5G3 303.77 2444.97 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
47. CCT4 ENSGALG00000008812 303.77 2444.97 chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
48. CDC42 ENSGALG00000004796 303.77 2444.97 cell division cycle 42 [Source:NCBI gene;Acc:395917]
49. COX7C ENSGALG00000027963 303.77 2444.97 cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
50. CPSF4 ENSGALG00000004714 303.77 2444.97 cleavage and polyadenylation specific factor 4 [Source:NCBI gene;Acc:416494]
51. CUL4B ENSGALG00000008559 303.77 2444.97 cullin 4B [Source:HGNC Symbol;Acc:HGNC:2555]
52. CZH9ORF80 CZH9ORF80 303.77 2444.97
53. EEF1B2 ENSGALG00000008590 303.77 2444.97 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
54. EIF1 ENSGALG00000028517 303.77 2444.97 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
55. EIF4G2 ENSGALG00000005587 303.77 2444.97 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
56. ENO1 ENSGALG00000002377 303.77 2444.97 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
57. ENSGALG00000018386 ENSGALG00000018386 303.77 2444.97
58. GPC4 ENSGALG00000006080 303.77 2444.97 glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
59. HSPE1 ENSGALG00000009070 303.77 2444.97 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
60. IGF2BP3 ENSGALG00000010961 303.77 2444.97 insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
61. NDUFA11 ENSGALG00000021692 303.77 2444.97 NADH:ubiquinone oxidoreductase subunit A11
62. NDUFAB1 ENSGALG00000006073 303.77 2444.97 NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
63. NDUFB9 ENSGALG00000042242 303.77 2444.97 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
64. NT5DC2 ENSGALG00000035596 303.77 2444.97 5'-nucleotidase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25717]
65. NUDT21 ENSGALG00000003084 303.77 2444.97 nudix hydrolase 21 [Source:NCBI gene;Acc:100858636]
66. PARVB ENSGALG00000014201 303.77 2444.97 parvin beta [Source:HGNC Symbol;Acc:HGNC:14653]
67. PRMT3 ENSGALG00000003958 303.77 2444.97 protein arginine methyltransferase 3 [Source:NCBI gene;Acc:422975]
68. RAN ENSGALG00000002569 303.77 2444.97 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
69. RPL13 ENSGALG00000006179 303.77 2444.97 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
70. RPL18A 303.77 2444.97 ribosomal protein L18a
71. RPL21 ENSGALG00000027035 303.77 2444.97 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
72. RPL27 ENSGALG00000002837 303.77 2444.97 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
73. RPL31 ENSGALG00000016775 303.77 2444.97 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
74. RPL4 ENSGALG00000007711 303.77 2444.97 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
75. RPL5 ENSGALG00000005922 303.77 2444.97 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
76. RPL9 ENSGALG00000000150 303.77 2444.97 ribosomal protein L9 [Source:NCBI gene;Acc:425468]
77. RPLP2 ENSGALG00000034811 303.77 2444.97 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
78. RPS16 ENSGALG00000026490 303.77 2444.97 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
79. RPS20 ENSGALG00000014432 303.77 2444.97 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
80. RPS24 ENSGALG00000004871 303.77 2444.97 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
81. RPS29 ENSGALG00000012229 303.77 2444.97 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
82. SLC25A3 ENSGALG00000011514 303.77 2444.97 solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
83. TRIP12 ENSGALG00000002929 303.77 2444.97 thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
84. UQCRH ENSGALG00000017380 303.77 2444.97 ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
85. WDR1 ENSGALG00000014957 303.77 2444.97 WD repeat domain 1 [Source:NCBI gene;Acc:422842]
86. WLS ENSGALG00000011238 303.77 2444.97 wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
87. YWHAZ ENSGALG00000031387 303.77 2444.97 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
88. AKAP1 ENSGALG00000005575 202.51 1629.95 A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
89. AP2A2 ENSGALG00000006799 202.51 1629.95 adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
90. ARHGDIA ENSGALG00000008443 202.51 1629.95 Rho GDP dissociation inhibitor alpha [Source:NCBI gene;Acc:769231]
91. BTF3 ENSGALG00000013512 202.51 1629.95 basic transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:1125]
92. C1orf123 ENSGALG00000026516 202.51 1629.95 chromosome 1 open reading frame 123 [Source:HGNC Symbol;Acc:HGNC:26059]
93. C2CD5 ENSGALG00000013210 202.51 1629.95 C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
94. C6ORF162 C6ORF162 202.51 1629.95
95. C9orf85 ENSGALG00000026001 202.51 1629.95 chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
96. CALSYNTENIN-1 CALSYNTENIN-1 202.51 1629.95
97. CBX3 ENSGALG00000011038 202.51 1629.95 chromobox 3 [Source:NCBI gene;Acc:395355]
98. CCDC88C ENSGALG00000040156 202.51 1629.95 coiled-coil domain containing 88C [Source:HGNC Symbol;Acc:HGNC:19967]
99. CENPE ENSGALG00000013208 202.51 1629.95 centromere protein E, transcript variant X4
100. CENPF ENSGALG00000009690 202.51 1629.95 centromere protein F [Source:NCBI gene;Acc:395357]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA