Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_posterior_slice_3, section s52.

Sample reads: 124,241. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 7040.32 56666.48
2. MT-CO3 MT-CO3 5797.91 46666.51
3. MT-CO1 MT-CO1 5383.77 43333.16
4. MT-ND5 MT-ND5 4141.36 33333.19
5. MT-CYB MT-CYB 3313.09 26666.56
6. MT-ND4 MT-ND4 2484.82 19999.94
7. GAPDH ENSGALG00000014442 2070.68 16666.59 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
8. MT-ND1 MT-ND1 2070.68 16666.59
9. gga-mir-3527 gga-mir-3527 2070.68 16666.59
10. EEF1A EEF1A 1656.55 13333.32
11. LDHB ENSGALG00000035836 1242.41 9999.97 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
12. MT-ND3 MT-ND3 1242.41 9999.97
13. RPL15 ENSGALG00000011290 1242.41 9999.97 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
14. RPL21 ENSGALG00000027035 1242.41 9999.97 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
15. RPL29 ENSGALG00000026978 1242.41 9999.97 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
16. RPS15A ENSGALG00000006771 1242.41 9999.97 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
17. STMN1 ENSGALG00000001475 1242.41 9999.97 stathmin 1 [Source:NCBI gene;Acc:396057]
18. ANXA2 ENSGALG00000003770 828.27 6666.62 annexin A2 [Source:NCBI gene;Acc:396297]
19. EEF1B2 ENSGALG00000008590 828.27 6666.62 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
20. ENO1 ENSGALG00000002377 828.27 6666.62 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
21. ENSGALG00000018386 ENSGALG00000018386 828.27 6666.62
22. G3BP1 ENSGALG00000004160 828.27 6666.62 G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
23. H2AFZ ENSGALG00000014023 828.27 6666.62 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
24. HBE 828.27 6666.62 hemoglobin subunit epsilon
25. HNRNPA2B1 ENSGALG00000011036 828.27 6666.62 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:NCBI gene;Acc:420627]
26. MTFR1L ENSGALG00000000998 828.27 6666.62 mitochondrial fission regulator 1 like [Source:HGNC Symbol;Acc:HGNC:28836]
27. NCKAP1 ENSGALG00000002750 828.27 6666.62 NCK associated protein 1 [Source:HGNC Symbol;Acc:HGNC:7666]
28. NXN 828.27 6666.62 nucleoredoxin, transcript variant X1
29. PDAP1 ENSGALG00000036552 828.27 6666.62 PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
30. PRPF38A ENSGALG00000010627 828.27 6666.62 pre-mRNA processing factor 38A [Source:NCBI gene;Acc:771795]
31. RPL13 ENSGALG00000006179 828.27 6666.62 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
32. RPL27 ENSGALG00000002837 828.27 6666.62 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
33. RPL31 ENSGALG00000016775 828.27 6666.62 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
34. RPL36 ENSGALG00000000474 828.27 6666.62 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
35. RPL37A ENSGALG00000011472 828.27 6666.62 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
36. RPL8 ENSGALG00000016232 828.27 6666.62 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
37. RPS16 ENSGALG00000026490 828.27 6666.62 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
38. RPS20 ENSGALG00000014432 828.27 6666.62 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
39. RPS3A ENSGALG00000010077 828.27 6666.62 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
40. RPS6 ENSGALG00000015082 828.27 6666.62 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
41. SMARCE1 ENSGALG00000003882 828.27 6666.62 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
42. TBCD ENSGALG00000001503 828.27 6666.62 tubulin folding cofactor D [Source:NCBI gene;Acc:417334]
43. USPL1 ENSGALG00000017079 828.27 6666.62 ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
44. AGPAT3 ENSGALG00000031932 414.14 3333.35 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
45. AIRC AIRC 414.14 3333.35
46. ANP32B ENSGALG00000037483 414.14 3333.35 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
47. APCDD1 ENSGALG00000000894 414.14 3333.35 APC down-regulated 1 [Source:NCBI gene;Acc:426765]
48. ATP5C1 414.14 3333.35 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
49. ATRX ENSGALG00000007843 414.14 3333.35 ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
50. BCAS2 ENSGALG00000002002 414.14 3333.35 breast carcinoma amplified sequence 2 [Source:NCBI gene;Acc:419884]
51. BRP44L BRP44L 414.14 3333.35
52. BTF3L4 ENSGALG00000010570 414.14 3333.35 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
53. C16ORF61 C16ORF61 414.14 3333.35
54. CALM CALM 414.14 3333.35
55. CANX ENSGALG00000032148 414.14 3333.35 calnexin [Source:NCBI gene;Acc:416288]
56. CASP8AP2 ENSGALG00000015611 414.14 3333.35 caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
57. CCDC101 CCDC101 414.14 3333.35
58. CCDC88C ENSGALG00000040156 414.14 3333.35 coiled-coil domain containing 88C [Source:HGNC Symbol;Acc:HGNC:19967]
59. CCNB2 ENSGALG00000004161 414.14 3333.35 cyclin B2 [Source:NCBI gene;Acc:415400]
60. CCT6 CCT6 414.14 3333.35
61. CDC34 ENSGALG00000024332 414.14 3333.35 cell division cycle 34 [Source:HGNC Symbol;Acc:HGNC:1734]
62. CHMP7 ENSGALG00000000409 414.14 3333.35 charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
63. CHPKCI CHPKCI 414.14 3333.35
64. CHST10 ENSGALG00000016769 414.14 3333.35 carbohydrate sulfotransferase 10 [Source:NCBI gene;Acc:395206]
65. CLTA ENSGALG00000015326 414.14 3333.35 clathrin light chain A [Source:NCBI gene;Acc:427284]
66. CLTC ENSGALG00000005139 414.14 3333.35 clathrin heavy chain [Source:NCBI gene;Acc:395272]
67. CMIP ENSGALG00000038494 414.14 3333.35 c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
68. COMMD2 ENSGALG00000028001 414.14 3333.35 COMM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24993]
69. COX5A ENSGALG00000014121 414.14 3333.35 cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
70. COX6A1 ENSGALG00000007205 414.14 3333.35 cytochrome c oxidase subunit 6A1 [Source:NCBI gene;Acc:416978]
71. CRHOA CRHOA 414.14 3333.35
72. CSRNP1 ENSGALG00000027905 414.14 3333.35 cysteine and serine rich nuclear protein 1 [Source:HGNC Symbol;Acc:HGNC:14300]
73. CTNNB1 ENSGALG00000037203 414.14 3333.35 catenin beta 1 [Source:NCBI gene;Acc:395964]
74. DAP3 ENSGALG00000019796 414.14 3333.35 death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
75. DCN ENSGALG00000011274 414.14 3333.35 decorin [Source:NCBI gene;Acc:417892]
76. DDX19B ENSGALG00000039967 414.14 3333.35 ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
77. DDX27 ENSGALG00000006974 414.14 3333.35 DEAD-box helicase 27 [Source:NCBI gene;Acc:419308]
78. DPP9 ENSGALG00000004200 414.14 3333.35 dipeptidyl peptidase 9 [Source:HGNC Symbol;Acc:HGNC:18648]
79. DR1 ENSGALG00000005858 414.14 3333.35 down-regulator of transcription 1 [Source:NCBI gene;Acc:424496]
80. DRG2 ENSGALG00000004953 414.14 3333.35 developmentally regulated GTP binding protein 2 [Source:NCBI gene;Acc:416513]
81. DSP ENSGALG00000012790 414.14 3333.35 desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
82. DYL1 ENSGALG00000007153 414.14 3333.35 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
83. ECHDC1 ENSGALG00000014828 414.14 3333.35 ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
84. EIF2S1 ENSGALG00000009565 414.14 3333.35 eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
85. EIF3A ENSGALG00000009328 414.14 3333.35 eukaryotic translation initiation factor 3 subunit A [Source:HGNC Symbol;Acc:HGNC:3271]
86. EIF4E ENSGALG00000042112 414.14 3333.35 eukaryotic translation initiation factor 4E [Source:HGNC Symbol;Acc:HGNC:3287]
87. ENSGALG00000016007 ENSGALG00000016007 414.14 3333.35
88. ENSGALG00000026592 ENSGALG00000026592 414.14 3333.35
89. ENY2 ENSGALG00000036618 414.14 3333.35 ENY2, transcription and export complex 2 subunit [Source:NCBI gene;Acc:420275]
90. EXOC3 ENSGALG00000013397 414.14 3333.35 exocyst complex component 3 [Source:NCBI gene;Acc:420987]
91. FKBP4 ENSGALG00000014331 414.14 3333.35 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
92. GABARAPL2 ENSGALG00000003208 414.14 3333.35 GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
93. GLI3 ENSGALG00000040266 414.14 3333.35 GLI family zinc finger 3 [Source:NCBI gene;Acc:420769]
94. GPI ENSGALG00000004956 414.14 3333.35 glucose-6-phosphate isomerase [Source:NCBI gene;Acc:415783]
95. GSPT1 414.14 3333.35 G1 to S phase transition 1, transcript variant X1
96. GSTAL2 ENSGALG00000028551 414.14 3333.35 glutathione S-transferase alpha-like 2, transcript variant X4
97. GSTK1 ENSGALG00000014708 414.14 3333.35 glutathione S-transferase kappa 1 [Source:NCBI gene;Acc:418302]
98. HIAT1 HIAT1 414.14 3333.35
99. HSPA8 ENSGALG00000006512 414.14 3333.35 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
100. HSPA9 ENSGALG00000002363 414.14 3333.35 heat shock protein family A (Hsp70) member 9 [Source:NCBI gene;Acc:416183]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA