Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_posterior_slice_2, section s9.

Sample reads: 124,241. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 6212.05 49999.88
2. EEF1A EEF1A 5435.54 43749.86
3. MT-CO3 MT-CO3 5435.54 43749.86
4. MT-ND5 MT-ND5 3106.02 24999.90
5. EEF1B2 ENSGALG00000008590 2329.52 18749.96 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
6. MT-CYB MT-CYB 2329.52 18749.96
7. gga-mir-3527 gga-mir-3527 2329.52 18749.96
8. CIRBP ENSGALG00000030918 1553.01 12499.95 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
9. EIF4G2 ENSGALG00000005587 1553.01 12499.95 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
10. ENO1 ENSGALG00000002377 1553.01 12499.95 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
11. ENSGALG00000002696 ENSGALG00000002696 1553.01 12499.95
12. ENSGALG00000018384 ENSGALG00000018384 1553.01 12499.95
13. GAPDH ENSGALG00000014442 1553.01 12499.95 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
14. MT-CO1 MT-CO1 1553.01 12499.95
15. MT-ND3 MT-ND3 1553.01 12499.95
16. MT-ND4 MT-ND4 1553.01 12499.95
17. NME2 ENSGALG00000002932 1553.01 12499.95 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
18. PRDM15 ENSGALG00000019178 1553.01 12499.95 PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
19. RAN ENSGALG00000002569 1553.01 12499.95 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
20. RPL5 ENSGALG00000005922 1553.01 12499.95 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
21. RPS23 ENSGALG00000015617 1553.01 12499.95 ribosomal protein S23
22. TCF12 ENSGALG00000004304 1553.01 12499.95 transcription factor 12 [Source:NCBI gene;Acc:396334]
23. ACAD11 ENSGALG00000035949 776.51 6250.01 acyl-CoA dehydrogenase family member 11 [Source:NCBI gene;Acc:420689]
24. AHCY ENSGALG00000033677 776.51 6250.01 adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
25. AP3D1 ENSGALG00000000996 776.51 6250.01 adaptor related protein complex 3 delta 1 subunit, transcript variant X2
26. ATP5A1 ATP5A1 776.51 6250.01
27. ATP6V0C ENSGALG00000009229 776.51 6250.01 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
28. ATP6V1G1 ENSGALG00000007190 776.51 6250.01 ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
29. BLZF1 ENSGALG00000015225 776.51 6250.01 basic leucine zipper nuclear factor 1 [Source:HGNC Symbol;Acc:HGNC:1065]
30. C13H5ORF15 C13H5ORF15 776.51 6250.01
31. C20H20ORF24 ENSGALG00000001054 776.51 6250.01 chromosome 20 open reading frame, human C20orf24 [Source:NCBI gene;Acc:768550]
32. C9orf78 ENSGALG00000004152 776.51 6250.01 chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:24932]
33. CAPZA1 ENSGALG00000001547 776.51 6250.01 capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
34. CD2AP ENSGALG00000016720 776.51 6250.01 Gallus gallus CD2 associated protein (CD2AP), mRNA. [Source:RefSeq mRNA;Acc:NM_001318403]
35. CHERP ENSGALG00000003824 776.51 6250.01 calcium homeostasis endoplasmic reticulum protein [Source:NCBI gene;Acc:420144]
36. CMIP ENSGALG00000038494 776.51 6250.01 c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
37. CNDP2 ENSGALG00000019514 776.51 6250.01 carnosine dipeptidase 2 [Source:NCBI gene;Acc:421013]
38. CSNK1D ENSGALG00000002719 776.51 6250.01 casein kinase 1 delta [Source:NCBI gene;Acc:417378]
39. DNAJC25 ENSGALG00000015684 776.51 6250.01 DnaJ heat shock protein family (Hsp40) member C25
40. DNAJC8 ENSGALG00000000790 776.51 6250.01 DnaJ heat shock protein family (Hsp40) member C8 [Source:HGNC Symbol;Acc:HGNC:15470]
41. DYL1 ENSGALG00000007153 776.51 6250.01 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
42. E2F1 ENSGALG00000003045 776.51 6250.01 E2F transcription factor 1 [Source:NCBI gene;Acc:396142]
43. EIF2AK1 ENSGALG00000003391 776.51 6250.01 eukaryotic translation initiation factor 2 alpha kinase 1 [Source:NCBI gene;Acc:395360]
44. EIF6 ENSGALG00000033993 776.51 6250.01 eukaryotic translation initiation factor 6 [Source:NCBI gene;Acc:419140]
45. EMC2 ENSGALG00000040325 776.51 6250.01 ER membrane protein complex subunit 2 [Source:NCBI gene;Acc:420273]
46. ENPP2 ENSGALG00000032746 776.51 6250.01 ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:NCBI gene;Acc:420361]
47. ENSGALG00000018386 ENSGALG00000018386 776.51 6250.01
48. ENSGALG00000029084 ENSGALG00000029084 776.51 6250.01
49. FAM120A ENSGALG00000039316 776.51 6250.01 family with sequence similarity 120A, transcript variant X1
50. FKBP4 ENSGALG00000014331 776.51 6250.01 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
51. FN1 ENSGALG00000003578 776.51 6250.01 fibronectin 1 [Source:NCBI gene;Acc:396133]
52. FTH FTH 776.51 6250.01
53. FURIN ENSGALG00000008341 776.51 6250.01 furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
54. GATC ENSGALG00000007195 776.51 6250.01 glutamyl-tRNA amidotransferase subunit C, transcript variant X2
55. GNB1 ENSGALG00000001334 776.51 6250.01 G protein subunit beta 1 [Source:NCBI gene;Acc:419402]
56. GNG5 ENSGALG00000027561 776.51 6250.01 G protein subunit gamma 5 [Source:NCBI gene;Acc:424538]
57. GNL2 ENSGALG00000001973 776.51 6250.01 G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
58. H3-IX H3-IX 776.51 6250.01
59. HMGB1 ENSGALG00000042875 776.51 6250.01 high mobility group box 1 [Source:NCBI gene;Acc:395724]
60. HMGN5 ENSGALG00000007131 776.51 6250.01 high mobility group nucleosome binding domain 5, transcript variant X1
61. HNRNPA3 ENSGALG00000009250 776.51 6250.01 heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]
62. HSPE1 ENSGALG00000009070 776.51 6250.01 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
63. IDH2 ENSGALG00000034434 776.51 6250.01 isocitrate dehydrogenase (NADP(+)) 2, mitochondrial [Source:NCBI gene;Acc:431056]
64. ING4 ENSGALG00000014457 776.51 6250.01 inhibitor of growth family member 4 [Source:NCBI gene;Acc:418281]
65. ITPK1 ENSGALG00000034898 776.51 6250.01 inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
66. KBTBD4 ENSGALG00000008089 776.51 6250.01 kelch repeat and BTB domain containing 4 [Source:NCBI gene;Acc:423180]
67. KPNA2 ENSGALG00000003584 776.51 6250.01 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
68. LOC419404 ENSGALG00000021676 776.51 6250.01 uncharacterized LOC419404
69. LRWD1 ENSGALG00000001852 776.51 6250.01 leucine rich repeats and WD repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21769]
70. MAD2L1BP ENSGALG00000027871 776.51 6250.01 MAD2L1 binding protein [Source:HGNC Symbol;Acc:HGNC:21059]
71. MARCKSL1 ENSGALG00000032335 776.51 6250.01 MARCKS like 1 [Source:NCBI gene;Acc:770764]
72. MDH1 ENSGALG00000008858 776.51 6250.01 malate dehydrogenase 1 [Source:NCBI gene;Acc:421281]
73. MED18 ENSGALG00000028149 776.51 6250.01 mediator complex subunit 18 [Source:HGNC Symbol;Acc:HGNC:25944]
74. MRPL35 ENSGALG00000022950 776.51 6250.01 mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]
75. MT-ND1 MT-ND1 776.51 6250.01
76. MTFR1 ENSGALG00000038385 776.51 6250.01 mitochondrial fission regulator 1 [Source:NCBI gene;Acc:395222]
77. NCBP1 ENSGALG00000002087 776.51 6250.01 nuclear cap binding protein subunit 1 [Source:NCBI gene;Acc:427379]
78. NCKAP1 ENSGALG00000002750 776.51 6250.01 NCK associated protein 1 [Source:HGNC Symbol;Acc:HGNC:7666]
79. NMD3 ENSGALG00000009533 776.51 6250.01 NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]
80. NOLC1 ENSGALG00000041124 776.51 6250.01 nucleolar and coiled-body phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:15608]
81. NPEPL1 ENSGALG00000007533 776.51 6250.01 aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
82. NSA2 ENSGALG00000014942 776.51 6250.01 NSA2, ribosome biogenesis homolog [Source:NCBI gene;Acc:427206]
83. NUCKS1 ENSGALG00000000708 776.51 6250.01 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
84. NUDT7 ENSGALG00000034395 776.51 6250.01 nudix hydrolase 7 [Source:NCBI gene;Acc:415800]
85. OTUD6B ENSGALG00000041337 776.51 6250.01 OTU domain containing 6B [Source:NCBI gene;Acc:420222]
86. PCDH18 ENSGALG00000009732 776.51 6250.01 protocadherin 18 [Source:HGNC Symbol;Acc:HGNC:14268]
87. POLR2E ENSGALG00000002591 776.51 6250.01 RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
88. PPA2 ENSGALG00000010582 776.51 6250.01 pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
89. PSMC1 ENSGALG00000010675 776.51 6250.01 proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:395804]
90. RPL18A 776.51 6250.01 ribosomal protein L18a
91. RPL23 ENSGALG00000001634 776.51 6250.01 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
92. RPL26 RPL26 776.51 6250.01
93. RPL31 ENSGALG00000016775 776.51 6250.01 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
94. RPL32 ENSGALG00000027142 776.51 6250.01 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
95. RPL7 ENSGALG00000035252 776.51 6250.01 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
96. RPL7A ENSGALG00000003197 776.51 6250.01 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
97. RPL9 ENSGALG00000000150 776.51 6250.01 ribosomal protein L9 [Source:NCBI gene;Acc:425468]
98. RPN1 ENSGALG00000005907 776.51 6250.01 ribophorin I [Source:HGNC Symbol;Acc:HGNC:10381]
99. RPS12 ENSGALG00000013990 776.51 6250.01 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
100. RPS2 ENSGALG00000005490 776.51 6250.01 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA