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Experiment Chicken_E3_posterior_slice_2, section s15.

Sample reads: 124,241. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 5699.12 45871.65
2. MT-CO3 MT-CO3 4559.30 36697.35
3. gga-mir-3527 gga-mir-3527 4559.30 36697.35
4. ALDH1A2 ENSGALG00000004270 3419.47 27522.97 aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
5. BMP3 ENSGALG00000035052 2279.65 18348.67 bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
6. EEF1A EEF1A 2279.65 18348.67
7. ENSGALG00000014190 ENSGALG00000014190 2279.65 18348.67
8. MT-CO1 MT-CO1 2279.65 18348.67
9. MT-CYB MT-CYB 2279.65 18348.67
10. MT-ND1 MT-ND1 2279.65 18348.67
11. MT-ND3 MT-ND3 2279.65 18348.67
12. MT-ND5 MT-ND5 2279.65 18348.67
13. NME2 ENSGALG00000002932 2279.65 18348.67 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
14. PARVB ENSGALG00000014201 2279.65 18348.67 parvin beta [Source:HGNC Symbol;Acc:HGNC:14653]
15. RPS7 ENSGALG00000016392 2279.65 18348.67 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
16. SDC1 ENSGALG00000016480 2279.65 18348.67 syndecan 1 [Source:HGNC Symbol;Acc:HGNC:10658]
17. SNRPG ENSGALG00000028409 2279.65 18348.67 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
18. ABCC10 1139.82 9174.30 ATP binding cassette subfamily C member 10, transcript variant X10
19. ANP32E ENSGALG00000039891 1139.82 9174.30 acidic nuclear phosphoprotein 32 family member E [Source:NCBI gene;Acc:426109]
20. ARF4 ENSGALG00000005622 1139.82 9174.30 ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]
21. ATP2A2 ENSGALG00000032287 1139.82 9174.30 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
22. ATP5MC1 ENSGALG00000001330 1139.82 9174.30 ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
23. CADM1 ENSGALG00000014582 1139.82 9174.30 cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5951]
24. CALM_1 CALM_1 1139.82 9174.30
25. CAND1 1139.82 9174.30 cullin associated and neddylation dissociated 1
26. CAPZA1 ENSGALG00000001547 1139.82 9174.30 capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
27. CHERP ENSGALG00000003824 1139.82 9174.30 calcium homeostasis endoplasmic reticulum protein [Source:NCBI gene;Acc:420144]
28. CHNTHL1 CHNTHL1 1139.82 9174.30
29. COL1A2 ENSGALG00000009641 1139.82 9174.30 collagen type I alpha 2 chain [Source:NCBI gene;Acc:396243]
30. CRABP-I ENSGALG00000003193 1139.82 9174.30 cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
31. CTU2 1139.82 9174.30 cytosolic thiouridylase subunit 2, transcript variant X3
32. DDX21 ENSGALG00000004144 1139.82 9174.30 DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
33. DENR ENSGALG00000003795 1139.82 9174.30 density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
34. DYNLL2 ENSGALG00000005522 1139.82 9174.30 dynein light chain LC8-type 2 [Source:NCBI gene;Acc:417663]
35. EGFLAM ENSGALG00000003726 1139.82 9174.30 EGF like, fibronectin type III and laminin G domains, transcript variant X1
36. EIF3J ENSGALG00000008187 1139.82 9174.30 eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
37. EIF4G2 ENSGALG00000005587 1139.82 9174.30 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
38. ENSGALG00000004773 ENSGALG00000004773 1139.82 9174.30
39. ENSGALG00000018386 ENSGALG00000018386 1139.82 9174.30
40. FAM103A1 1139.82 9174.30 family with sequence similarity 103 member A1, transcript variant X2
41. FBN3 ENSGALG00000037625 1139.82 9174.30 fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
42. GPBP1L1 ENSGALG00000010276 1139.82 9174.30 GC-rich promoter binding protein 1 like 1 [Source:NCBI gene;Acc:424603]
43. H3-IX H3-IX 1139.82 9174.30
44. HMBS ENSGALG00000042939 1139.82 9174.30 hydroxymethylbilane synthase [Source:HGNC Symbol;Acc:HGNC:4982]
45. HOXD8 ENSGALG00000037272 1139.82 9174.30 homeobox D8 [Source:NCBI gene;Acc:396301]
46. HSPA5 ENSGALG00000001000 1139.82 9174.30 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) [Source:NCBI gene;Acc:396487]
47. IMP4 ENSGALG00000029152 1139.82 9174.30 IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
48. ITGA1 ENSGALG00000014891 1139.82 9174.30 integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
49. LZIC ENSGALG00000002616 1139.82 9174.30 leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
50. M6PR ENSGALG00000031681 1139.82 9174.30 mannose-6-phosphate receptor, cation dependent, transcript variant X3
51. MAU2 ENSGALG00000002969 1139.82 9174.30 MAU2 sister chromatid cohesion factor [Source:HGNC Symbol;Acc:HGNC:29140]
52. MCM2 ENSGALG00000006037 1139.82 9174.30 minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
53. MGST3 ENSGALG00000003445 1139.82 9174.30 microsomal glutathione S-transferase 3 [Source:NCBI gene;Acc:424404]
54. MLF2 ENSGALG00000014468 1139.82 9174.30 myeloid leukemia factor 2 [Source:NCBI gene;Acc:418284]
55. MOB3A ENSGALG00000031729 1139.82 9174.30 MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
56. MRPL17 ENSGALG00000002605 1139.82 9174.30 mitochondrial ribosomal protein L17 [Source:HGNC Symbol;Acc:HGNC:14053]
57. MRPL32 ENSGALG00000037258 1139.82 9174.30 mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
58. MT-ND4 MT-ND4 1139.82 9174.30
59. PFDN4 ENSGALG00000007792 1139.82 9174.30 prefoldin subunit 4 [Source:NCBI gene;Acc:419337]
60. PGK1 ENSGALG00000007936 1139.82 9174.30 phosphoglycerate kinase 1 [Source:NCBI gene;Acc:395833]
61. PHGDH ENSGALG00000002988 1139.82 9174.30 phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
62. POLR1C ENSGALG00000010349 1139.82 9174.30 RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
63. POLR2D ENSGALG00000002057 1139.82 9174.30 RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
64. POLR2E ENSGALG00000002591 1139.82 9174.30 RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
65. PRDX6 ENSGALG00000003053 1139.82 9174.30 peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
66. PTBP2 ENSGALG00000005552 1139.82 9174.30 polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
67. PURH PURH 1139.82 9174.30
68. RPL31 ENSGALG00000016775 1139.82 9174.30 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
69. RPL36 ENSGALG00000000474 1139.82 9174.30 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
70. RPL37 ENSGALG00000014833 1139.82 9174.30 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
71. RPL5 ENSGALG00000005922 1139.82 9174.30 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
72. RPS3 ENSGALG00000017330 1139.82 9174.30 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
73. SF3B1 ENSGALG00000008038 1139.82 9174.30 splicing factor 3b subunit 1 [Source:HGNC Symbol;Acc:HGNC:10768]
74. SMC2 ENSGALG00000015691 1139.82 9174.30 structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
75. SUMO3 ENSGALG00000032783 1139.82 9174.30 small ubiquitin-like modifier 3 [Source:NCBI gene;Acc:770553]
76. TCEB3 ENSGALG00000034625 1139.82 9174.30 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
77. TCOF1 ENSGALG00000005535 1139.82 9174.30 treacle ribosome biogenesis factor 1 [Source:NCBI gene;Acc:416276]
78. TMC1 ENSGALG00000015145 1139.82 9174.30 transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
79. TMEM120B ENSGALG00000004254 1139.82 9174.30 transmembrane protein 120B [Source:NCBI gene;Acc:416847]
80. TMEM62 ENSGALG00000009260 1139.82 9174.30 transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
81. TMEM97 ENSGALG00000005702 1139.82 9174.30 transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
82. UQCRFS1 ENSGALG00000025819 1139.82 9174.30 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:NCBI gene;Acc:415752]
83. ZNF217 ZNF217 1139.82 9174.30
84. gga-mir-3533 ENSGALG00000027736 1139.82 9174.30 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
85. 5 5 0.00 0.00
86. 5-MCDG 5-MCDG 0.00 0.00
87. 5S 5S 0.00 0.00
88. 5S_1 5S_1 0.00 0.00
89. 5S_2 5S_2 0.00 0.00
90. 7SK 7SK 0.00 0.00
91. 7SK_1 7SK_1 0.00 0.00
92. 7SK_2 7SK_2 0.00 0.00
93. A1CF ENSGALG00000003765 0.00 0.00 APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
94. A2ML2 ENSGALG00000014252 0.00 0.00 alpha-2-macroglobulin-like 2, transcript variant X6
95. A4GNT ENSGALG00000006600 0.00 0.00 alpha-1,4-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:17968]
96. AACS ENSGALG00000002899 0.00 0.00 acetoacetyl-CoA synthetase [Source:NCBI gene;Acc:416811]
97. AADAC ENSGALG00000010364 0.00 0.00 arylacetamide deacetylase [Source:HGNC Symbol;Acc:HGNC:17]
98. AADAT ENSGALG00000009655 0.00 0.00 aminoadipate aminotransferase [Source:HGNC Symbol;Acc:HGNC:17929]
99. AAED1 0.00 0.00 AhpC/TSA antioxidant enzyme domain containing 1
100. AAGAB ENSGALG00000007887 0.00 0.00 alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA