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Experiment Chicken_E3_posterior_slice_2, section s14.

Sample reads: 124,241. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 9203.03 74074.00
2. MT-CO3 MT-CO3 4601.52 37037.04
3. MT-CYB MT-CYB 4601.52 37037.04
4. CKAP2 ENSGALG00000017025 3451.14 27777.78 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
5. EEF1A EEF1A 3451.14 27777.78
6. MT-ND1 MT-ND1 3451.14 27777.78
7. MT-ND4 MT-ND4 3451.14 27777.78
8. APP ENSGALG00000015770 2300.76 18518.52 amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
9. EIF4EBP1 ENSGALG00000003205 2300.76 18518.52 eukaryotic translation initiation factor 4E binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3288]
10. GAPDH ENSGALG00000014442 2300.76 18518.52 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
11. GATAD2A ENSGALG00000042900 2300.76 18518.52 GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
12. IDH1 ENSGALG00000008818 2300.76 18518.52 isocitrate dehydrogenase (NADP(+)) 1, cytosolic [Source:HGNC Symbol;Acc:HGNC:5382]
13. MT-ND5 MT-ND5 2300.76 18518.52
14. PLOD2 ENSGALG00000006783 2300.76 18518.52 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]
15. SUGT1 ENSGALG00000016946 2300.76 18518.52 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
16. ASNS ENSGALG00000009748 1150.38 9259.26 asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
17. ATP6V0C ENSGALG00000009229 1150.38 9259.26 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
18. BZW2 ENSGALG00000010809 1150.38 9259.26 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
19. C1D ENSGALG00000008765 1150.38 9259.26 C1D nuclear receptor corepressor [Source:NCBI gene;Acc:421267]
20. C28H19ORF10 C28H19ORF10 1150.38 9259.26
21. CAPZA2 ENSGALG00000043437 1150.38 9259.26 capping actin protein of muscle Z-line alpha subunit 2 [Source:NCBI gene;Acc:417771]
22. CDC42 ENSGALG00000004796 1150.38 9259.26 cell division cycle 42 [Source:NCBI gene;Acc:395917]
23. CHKA ENSGALG00000036754 1150.38 9259.26 choline kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]
24. CIRBP ENSGALG00000030918 1150.38 9259.26 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
25. CTNNB1 ENSGALG00000037203 1150.38 9259.26 catenin beta 1 [Source:NCBI gene;Acc:395964]
26. DDOST ENSGALG00000010073 1150.38 9259.26 dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [Source:NCBI gene;Acc:425542]
27. DDX1 ENSGALG00000016461 1150.38 9259.26 DEAD-box helicase 1 [Source:NCBI gene;Acc:395249]
28. DEPDC1B ENSGALG00000014729 1150.38 9259.26 DEP domain containing 1B [Source:NCBI gene;Acc:427152]
29. DNAJC25 ENSGALG00000015684 1150.38 9259.26 DnaJ heat shock protein family (Hsp40) member C25
30. ENO1 ENSGALG00000002377 1150.38 9259.26 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
31. GALT ENSGALG00000026195 1150.38 9259.26 galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
32. GPI ENSGALG00000004956 1150.38 9259.26 glucose-6-phosphate isomerase [Source:NCBI gene;Acc:415783]
33. HECTD3 ENSGALG00000010217 1150.38 9259.26 HECT domain E3 ubiquitin protein ligase 3, transcript variant X2
34. HMGN2 HMGN2 1150.38 9259.26
35. HNRNPA0 ENSGALG00000006160 1150.38 9259.26 heterogeneous nuclear ribonucleoprotein A0 [Source:HGNC Symbol;Acc:HGNC:5030]
36. HSD17B12 ENSGALG00000036787 1150.38 9259.26 hydroxysteroid 17-beta dehydrogenase 12 [Source:HGNC Symbol;Acc:HGNC:18646]
37. HSD17B4 ENSGALG00000002187 1150.38 9259.26 hydroxysteroid 17-beta dehydrogenase 4 [Source:NCBI gene;Acc:395785]
38. IGDCC3 ENSGALG00000007371 1150.38 9259.26 immunoglobulin superfamily DCC subclass member 3 [Source:HGNC Symbol;Acc:HGNC:9700]
39. IRF6 ENSGALG00000001405 1150.38 9259.26 interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]
40. ITGB1BP3 ENSGALG00000030120 1150.38 9259.26 integrin beta 1 binding protein 3 [Source:NCBI gene;Acc:415448]
41. LDHB ENSGALG00000035836 1150.38 9259.26 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
42. LSM7 ENSGALG00000000408 1150.38 9259.26 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420055]
43. MIF ENSGALG00000006326 1150.38 9259.26 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
44. MT-ATP8 MT-ATP8 1150.38 9259.26
45. MT-CO1 MT-CO1 1150.38 9259.26
46. MT-ND6 MT-ND6 1150.38 9259.26
47. NDUFA10 ENSGALG00000004302 1150.38 9259.26 NADH:ubiquinone oxidoreductase subunit A10 [Source:NCBI gene;Acc:424032]
48. NUDCD2 ENSGALG00000001726 1150.38 9259.26 NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
49. PDGFRA ENSGALG00000013929 1150.38 9259.26 platelet-derived growth factor receptor, alpha polypeptide [Source:NCBI gene;Acc:395509]
50. PPIA ENSGALG00000028600 1150.38 9259.26 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
51. RALBP1 ENSGALG00000008405 1150.38 9259.26 ralA binding protein 1 [Source:NCBI gene;Acc:429466]
52. RBM18 ENSGALG00000028167 1150.38 9259.26 RNA binding motif protein 18 [Source:HGNC Symbol;Acc:HGNC:28413]
53. RBM45 ENSGALG00000009202 1150.38 9259.26 RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
54. RNF7 ENSGALG00000021117 1150.38 9259.26 ring finger protein 7 [Source:NCBI gene;Acc:424781]
55. RPL27A ENSGALG00000005948 1150.38 9259.26 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
56. RPL35A ENSGALG00000007611, ENSGALG00000041230 1150.38 9259.26 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
57. RPL36 ENSGALG00000000474 1150.38 9259.26 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
58. RPL4 ENSGALG00000007711 1150.38 9259.26 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
59. RPL7A ENSGALG00000003197 1150.38 9259.26 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
60. RPS12 ENSGALG00000013990 1150.38 9259.26 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
61. RPS14 ENSGALG00000004588 1150.38 9259.26 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
62. RPS15 ENSGALG00000015195 1150.38 9259.26 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
63. RPS3 ENSGALG00000017330 1150.38 9259.26 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
64. RPS6 ENSGALG00000015082 1150.38 9259.26 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
65. RPS8 ENSGALG00000010124 1150.38 9259.26 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
66. SF3B6 ENSGALG00000016501 1150.38 9259.26 splicing factor 3b subunit 6 [Source:HGNC Symbol;Acc:HGNC:30096]
67. SLBP ENSGALG00000015712 1150.38 9259.26 stem-loop binding protein [Source:NCBI gene;Acc:422902]
68. SLC16A1 ENSGALG00000001717 1150.38 9259.26 solute carrier family 16 member 1 [Source:NCBI gene;Acc:419875]
69. SLC25A6_1 ENSGALG00000016691 1150.38 9259.26 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
70. SMPD3 ENSGALG00000034950 1150.38 9259.26 sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
71. SRSF3 ENSGALG00000000533 1150.38 9259.26 serine and arginine rich splicing factor 3 [Source:NCBI gene;Acc:419815]
72. SUMO2 ENSGALG00000007971 1150.38 9259.26 small ubiquitin-like modifier 2 [Source:NCBI gene;Acc:770125]
73. TFAM ENSGALG00000002703 1150.38 9259.26 transcription factor A, mitochondrial [Source:NCBI gene;Acc:373888]
74. THOC5 ENSGALG00000029223 1150.38 9259.26 THO complex 5 [Source:NCBI gene;Acc:417019]
75. TOPBP1 ENSGALG00000034461 1150.38 9259.26 DNA topoisomerase II binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17008]
76. UGCG ENSGALG00000015682 1150.38 9259.26 UDP-glucose ceramide glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:12524]
77. UTP15 ENSGALG00000013510 1150.38 9259.26 UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
78. YWHAE ENSGALG00000002661 1150.38 9259.26 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:NCBI gene;Acc:417554]
79. gga-mir-3527 gga-mir-3527 1150.38 9259.26
80. 5 5 0.00 0.00
81. 5-MCDG 5-MCDG 0.00 0.00
82. 5S 5S 0.00 0.00
83. 5S_1 5S_1 0.00 0.00
84. 5S_2 5S_2 0.00 0.00
85. 7SK 7SK 0.00 0.00
86. 7SK_1 7SK_1 0.00 0.00
87. 7SK_2 7SK_2 0.00 0.00
88. A1CF ENSGALG00000003765 0.00 0.00 APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
89. A2ML2 ENSGALG00000014252 0.00 0.00 alpha-2-macroglobulin-like 2, transcript variant X6
90. A4GNT ENSGALG00000006600 0.00 0.00 alpha-1,4-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:17968]
91. AACS ENSGALG00000002899 0.00 0.00 acetoacetyl-CoA synthetase [Source:NCBI gene;Acc:416811]
92. AADAC ENSGALG00000010364 0.00 0.00 arylacetamide deacetylase [Source:HGNC Symbol;Acc:HGNC:17]
93. AADAT ENSGALG00000009655 0.00 0.00 aminoadipate aminotransferase [Source:HGNC Symbol;Acc:HGNC:17929]
94. AAED1 0.00 0.00 AhpC/TSA antioxidant enzyme domain containing 1
95. AAGAB ENSGALG00000007887 0.00 0.00 alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
96. AAK1 ENSGALG00000041911 0.00 0.00 AP2 associated kinase 1 [Source:HGNC Symbol;Acc:HGNC:19679]
97. AAMP ENSGALG00000011445 0.00 0.00 angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
98. AANAT ENSGALG00000001955 0.00 0.00 aralkylamine N-acetyltransferase [Source:NCBI gene;Acc:396066]
99. AARS ENSGALG00000001965 0.00 0.00 alanyl-tRNA synthetase [Source:NCBI gene;Acc:415668]
100. AARS2 ENSGALG00000035337 0.00 0.00 alanyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421436]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA