Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_posterior_slice_2, section s12.

Sample reads: 124,241. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 13431.45 108108.18
2. MT-CYB MT-CYB 5036.79 40540.54
3. CCT6 CCT6 3357.86 27027.02
4. PPIA ENSGALG00000028600 3357.86 27027.02 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
5. ARPC3 ENSGALG00000003820 1678.93 13513.51 actin related protein 2/3 complex subunit 3 [Source:NCBI gene;Acc:416837]
6. ASPM ENSGALG00000032398 1678.93 13513.51 abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
7. CAPZA1 ENSGALG00000001547 1678.93 13513.51 capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
8. CARHSP1 ENSGALG00000042981 1678.93 13513.51 calcium regulated heat stable protein 1 [Source:HGNC Symbol;Acc:HGNC:17150]
9. CDCA3 ENSGALG00000014513 1678.93 13513.51 cell division cycle associated 3 [Source:NCBI gene;Acc:770517]
10. CDH5 ENSGALG00000032349 1678.93 13513.51 cadherin 5 [Source:NCBI gene;Acc:374068]
11. CENPL ENSGALG00000038411 1678.93 13513.51 centromere protein L [Source:NCBI gene;Acc:426563]
12. COPS3 ENSGALG00000004834 1678.93 13513.51 COP9 signalosome subunit 3 [Source:NCBI gene;Acc:416504]
13. CRABP-I ENSGALG00000003193 1678.93 13513.51 cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
14. CRHOA CRHOA 1678.93 13513.51
15. DDT ENSGALG00000006350 1678.93 13513.51 D-dopachrome tautomerase [Source:NCBI gene;Acc:416937]
16. DOHH ENSGALG00000017524 1678.93 13513.51 deoxyhypusine hydroxylase [Source:NCBI gene;Acc:427066]
17. EEF1A EEF1A 1678.93 13513.51
18. EEF1B2 ENSGALG00000008590 1678.93 13513.51 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
19. FAM120A ENSGALG00000039316 1678.93 13513.51 family with sequence similarity 120A, transcript variant X1
20. FANCE ENSGALG00000002561 1678.93 13513.51 Fanconi anemia complementation group E
21. GAPDH ENSGALG00000014442 1678.93 13513.51 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
22. GLCCI1 ENSGALG00000035239 1678.93 13513.51 glucocorticoid induced 1 [Source:NCBI gene;Acc:420580]
23. GMPS ENSGALG00000010284 1678.93 13513.51 guanine monophosphate synthase [Source:NCBI gene;Acc:425028]
24. HAUS6 ENSGALG00000015091 1678.93 13513.51 HAUS augmin like complex subunit 6 [Source:NCBI gene;Acc:427238]
25. HDHD2 ENSGALG00000034801 1678.93 13513.51 haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
26. IPO7 ENSGALG00000005807 1678.93 13513.51 importin 7 [Source:HGNC Symbol;Acc:HGNC:9852]
27. MED10 ENSGALG00000028336 1678.93 13513.51 mediator complex subunit 10 [Source:HGNC Symbol;Acc:HGNC:28760]
28. MKKS ENSGALG00000009013 1678.93 13513.51 McKusick-Kaufman syndrome [Source:NCBI gene;Acc:416737]
29. MRPL51 ENSGALG00000014435 1678.93 13513.51 mitochondrial ribosomal protein L51 [Source:NCBI gene;Acc:418274]
30. MRPS25 ENSGALG00000008506 1678.93 13513.51 mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
31. MT-CO1 MT-CO1 1678.93 13513.51
32. MT-CO3 MT-CO3 1678.93 13513.51
33. MT-ND1 MT-ND1 1678.93 13513.51
34. MT-ND2 MT-ND2 1678.93 13513.51
35. MT-ND4 MT-ND4 1678.93 13513.51
36. MT-ND5 MT-ND5 1678.93 13513.51
37. NCKAP1 ENSGALG00000002750 1678.93 13513.51 NCK associated protein 1 [Source:HGNC Symbol;Acc:HGNC:7666]
38. NEIL1 ENSGALG00000001586 1678.93 13513.51 nei like DNA glycosylase 1 [Source:NCBI gene;Acc:770068]
39. NME2 ENSGALG00000002932 1678.93 13513.51 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
40. NUP214 ENSGALG00000041111 1678.93 13513.51 nucleoporin 214 [Source:HGNC Symbol;Acc:HGNC:8064]
41. PSMA3 ENSGALG00000012039 1678.93 13513.51 proteasome subunit alpha 3 [Source:NCBI gene;Acc:423542]
42. RAN ENSGALG00000002569 1678.93 13513.51 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
43. REPS1 ENSGALG00000013829 1678.93 13513.51 RALBP1 associated Eps domain containing 1 [Source:NCBI gene;Acc:421678]
44. RPL26 RPL26 1678.93 13513.51
45. RPL32 ENSGALG00000027142 1678.93 13513.51 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
46. RPL5 ENSGALG00000005922 1678.93 13513.51 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
47. RPL7A ENSGALG00000003197 1678.93 13513.51 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
48. RPLP1 ENSGALG00000030878 1678.93 13513.51 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
49. RPS13 ENSGALG00000006096 1678.93 13513.51 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
50. RPS21 ENSGALG00000005338 1678.93 13513.51 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
51. RPS23 ENSGALG00000015617 1678.93 13513.51 ribosomal protein S23
52. SAMHD1 ENSGALG00000001231 1678.93 13513.51 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 [Source:NCBI gene;Acc:419125]
53. SDOS SDOS 1678.93 13513.51
54. SEC13 ENSGALG00000008419 1678.93 13513.51 SEC13 homolog, nuclear pore and COPII coat complex component [Source:NCBI gene;Acc:416119]
55. SNRPG ENSGALG00000028409 1678.93 13513.51 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
56. STMN1 ENSGALG00000001475 1678.93 13513.51 stathmin 1 [Source:NCBI gene;Acc:396057]
57. TAF13 ENSGALG00000015185 1678.93 13513.51 TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
58. TNNI1 ENSGALG00000000313 1678.93 13513.51 troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
59. UBP1 ENSGALG00000035630 1678.93 13513.51 upstream binding protein 1 [Source:HGNC Symbol;Acc:HGNC:12507]
60. WDR1 ENSGALG00000014957 1678.93 13513.51 WD repeat domain 1 [Source:NCBI gene;Acc:422842]
61. WRN ENSGALG00000040909 1678.93 13513.51 Werner syndrome RecQ like helicase [Source:NCBI gene;Acc:422505]
62. gga-mir-3527 gga-mir-3527 1678.93 13513.51
63. gga-mir-3533 ENSGALG00000027736 1678.93 13513.51 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
64. 5 5 0.00 0.00
65. 5-MCDG 5-MCDG 0.00 0.00
66. 5S 5S 0.00 0.00
67. 5S_1 5S_1 0.00 0.00
68. 5S_2 5S_2 0.00 0.00
69. 7SK 7SK 0.00 0.00
70. 7SK_1 7SK_1 0.00 0.00
71. 7SK_2 7SK_2 0.00 0.00
72. A1CF ENSGALG00000003765 0.00 0.00 APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
73. A2ML2 ENSGALG00000014252 0.00 0.00 alpha-2-macroglobulin-like 2, transcript variant X6
74. A4GNT ENSGALG00000006600 0.00 0.00 alpha-1,4-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:17968]
75. AACS ENSGALG00000002899 0.00 0.00 acetoacetyl-CoA synthetase [Source:NCBI gene;Acc:416811]
76. AADAC ENSGALG00000010364 0.00 0.00 arylacetamide deacetylase [Source:HGNC Symbol;Acc:HGNC:17]
77. AADAT ENSGALG00000009655 0.00 0.00 aminoadipate aminotransferase [Source:HGNC Symbol;Acc:HGNC:17929]
78. AAED1 0.00 0.00 AhpC/TSA antioxidant enzyme domain containing 1
79. AAGAB ENSGALG00000007887 0.00 0.00 alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
80. AAK1 ENSGALG00000041911 0.00 0.00 AP2 associated kinase 1 [Source:HGNC Symbol;Acc:HGNC:19679]
81. AAMP ENSGALG00000011445 0.00 0.00 angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
82. AANAT ENSGALG00000001955 0.00 0.00 aralkylamine N-acetyltransferase [Source:NCBI gene;Acc:396066]
83. AARS ENSGALG00000001965 0.00 0.00 alanyl-tRNA synthetase [Source:NCBI gene;Acc:415668]
84. AARS2 ENSGALG00000035337 0.00 0.00 alanyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421436]
85. AARSD1 ENSGALG00000002880 0.00 0.00 Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
86. AASDH ENSGALG00000013764 0.00 0.00 aminoadipate-semialdehyde dehydrogenase [Source:HGNC Symbol;Acc:HGNC:23993]
87. AASDHPPT ENSGALG00000027981 0.00 0.00 aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
88. AASS ENSGALG00000008953 0.00 0.00 aminoadipate-semialdehyde synthase [Source:HGNC Symbol;Acc:HGNC:17366]
89. AATF ENSGALG00000005420 0.00 0.00 apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
90. AATK ENSGALG00000006901 0.00 0.00 apoptosis associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:21]
91. ABAT ENSGALG00000007334 0.00 0.00 4-aminobutyrate aminotransferase [Source:HGNC Symbol;Acc:HGNC:23]
92. ABCA1 ENSGALG00000015433 0.00 0.00 ATP-binding cassette, sub-family A (ABC1), member 1 [Source:NCBI gene;Acc:373945]
93. ABCA12 ENSGALG00000003553 0.00 0.00 ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
94. ABCA2 ENSGALG00000036894 0.00 0.00 ATP binding cassette subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:32]
95. ABCA3 ENSGALG00000037837 0.00 0.00 ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
96. ABCA4 ENSGALG00000005752 0.00 0.00 ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]
97. ABCA5 ENSGALG00000004333 0.00 0.00 ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35]
98. ABCA7 ENSGALG00000002453 0.00 0.00 ATP-binding cassette, sub-family A (ABC1), member 7, transcript variant X5
99. ABCA8 ENSGALG00000021399 0.00 0.00 ATP binding cassette subfamily A member 8
100. ABCA9 ENSGALG00000021395 0.00 0.00 ATP binding cassette subfamily A member 9
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA