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Experiment Chicken_E3_embryo, section s1.

Sample reads: 113,982. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 2218.80 19467.10
2. RPS23 ENSGALG00000015617 1812.24 15900.06 ribosomal protein S23
3. EEF1A EEF1A 1395.05 12239.76
4. CIRBP ENSGALG00000030918 1307.36 11470.39 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
5. RPS21 ENSGALG00000005338 1254.22 11004.16 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
6. RPL23A ENSGALG00000003966 1219.67 10701.03 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
7. RPL27 ENSGALG00000002837 1086.81 9535.35 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
8. RPL14 ENSGALG00000043379 964.58 8462.94 ribosomal protein L14
9. RPS8 ENSGALG00000010124 927.38 8136.56 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
10. RPL36 ENSGALG00000000474 866.26 7600.31 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
11. RPL29 ENSGALG00000026978 860.95 7553.72 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
12. RPL27A ENSGALG00000005948 807.80 7087.40 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
13. RPS15A ENSGALG00000006771 730.74 6411.30 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
14. gga-mir-3527 gga-mir-3527 730.74 6411.30
15. SNRPD1 ENSGALG00000041334 712.14 6248.11 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
16. RPL35A ENSGALG00000007611, ENSGALG00000041230 677.60 5945.06 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
17. RPL23 ENSGALG00000001634 635.08 5572.01 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
18. TXN ENSGALG00000015704 635.08 5572.01 thioredoxin [Source:NCBI gene;Acc:396437]
19. RPL35 ENSGALG00000035677 558.02 4895.90 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
20. RPL31 ENSGALG00000016775 536.76 4709.37 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
21. TCEB3 ENSGALG00000034625 536.76 4709.37 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
22. RPL36AL ENSGALG00000004952 531.45 4662.79 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
23. RPL18A 528.79 4639.45 ribosomal protein L18a
24. RPS11 ENSGALG00000017299 526.13 4616.11 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
25. RPL7A ENSGALG00000003197 518.16 4546.18 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
26. RPL26 RPL26 510.19 4476.26
27. RPLP1 ENSGALG00000030878 510.19 4476.26 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
28. LDHB ENSGALG00000035836 494.25 4336.40 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
29. RPL19 ENSGALG00000001658 478.30 4196.46 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
30. RPL32 ENSGALG00000027142 478.30 4196.46 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
31. RPL13 ENSGALG00000006179 465.02 4079.95 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
32. PRDX1 ENSGALG00000010243 451.73 3963.35 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
33. RPL12 ENSGALG00000008806 449.07 3940.01 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
34. RPL4 ENSGALG00000007711 435.79 3823.49 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
35. ATP5G3 433.13 3800.16 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
36. RPL24 ENSGALG00000015339 414.53 3636.96 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
37. RPS12 ENSGALG00000013990 393.27 3450.44 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
38. RPL7 ENSGALG00000035252 390.61 3427.10 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
39. ENO1 ENSGALG00000002377 387.96 3403.85 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
40. RPS2 ENSGALG00000005490 382.64 3357.17 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
41. RAN ENSGALG00000002569 369.36 3240.66 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
42. STMN1 ENSGALG00000001475 369.36 3240.66 stathmin 1 [Source:NCBI gene;Acc:396057]
43. RPS29 ENSGALG00000012229 356.07 3124.05 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
44. EEF1D 345.44 3030.79 eukaryotic translation elongation factor 1 delta, transcript variant X13
45. EIF4G2 ENSGALG00000005587 329.50 2890.94 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
46. RPS16 ENSGALG00000026490 329.50 2890.94 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
47. RPS24 ENSGALG00000004871 326.84 2867.60 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
48. EIF5A2 ENSGALG00000009309 324.18 2844.26 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
49. RPS13 ENSGALG00000006096 324.18 2844.26 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
50. RPS7 ENSGALG00000016392 324.18 2844.26 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
51. HNRNPDL ENSGALG00000023199 316.21 2774.33 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
52. MT-ND4 MT-ND4 316.21 2774.33
53. H3-IX H3-IX 313.55 2751.00
54. NME2 ENSGALG00000002932 310.90 2727.75 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
55. RPS27A ENSGALG00000036790 308.24 2704.41 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
56. TPT1 ENSGALG00000028872 305.58 2681.07 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
57. RPL37 ENSGALG00000014833 297.61 2611.14 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
58. SEC61G ENSGALG00000037863 297.61 2611.14 Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
59. MT-ND5 MT-ND5 279.01 2447.95
60. RPL21 ENSGALG00000027035 279.01 2447.95 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
61. RPL38 ENSGALG00000001465 279.01 2447.95 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
62. EIF1 ENSGALG00000028517 273.70 2401.36 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
63. ENSGALG00000002696 ENSGALG00000002696 273.70 2401.36
64. RPL37A ENSGALG00000011472 271.04 2378.03 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
65. CHCHD2 ENSGALG00000002495 265.72 2331.35 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
66. RPS4 RPS4 265.72 2331.35
67. SSR1 ENSGALG00000012798 255.10 2238.17 signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
68. YWHAZ ENSGALG00000031387 252.44 2214.83 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
69. CRHOA CRHOA 249.78 2191.50
70. HSPA8 ENSGALG00000006512 249.78 2191.50 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
71. RPS10 ENSGALG00000002813 249.78 2191.50 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
72. SLC25A6_1 ENSGALG00000016691 241.81 2121.57 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
73. EIF5 ENSGALG00000011464 239.15 2098.23 eukaryotic translation initiation factor 5 [Source:NCBI gene;Acc:423479]
74. ENSGALG00000028992 ENSGALG00000028992 239.15 2098.23
75. HSPE1 ENSGALG00000009070 239.15 2098.23 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
76. CCT4 ENSGALG00000008812 236.49 2074.89 chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
77. MT-ATP6 MT-ATP6 236.49 2074.89
78. COX7C ENSGALG00000027963 228.52 2004.97 cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
79. MT-CO1 MT-CO1 228.52 2004.97
80. FKBP4 ENSGALG00000014331 225.87 1981.72 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
81. EEF1B2 ENSGALG00000008590 223.21 1958.38 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
82. RPLP2 ENSGALG00000034811 223.21 1958.38 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
83. UBB ENSGALG00000004509 223.21 1958.38 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
84. MT-CYB MT-CYB 220.55 1935.04
85. RPS6 ENSGALG00000015082 212.58 1865.11 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
86. DDX5 ENSGALG00000003532 209.92 1841.78 DEAD-box helicase 5 [Source:NCBI gene;Acc:395629]
87. RPL8 ENSGALG00000016232 209.92 1841.78 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
88. TCP1 ENSGALG00000011637 209.92 1841.78 t-complex 1 [Source:NCBI gene;Acc:421586]
89. RPL5 ENSGALG00000005922 204.61 1795.19 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
90. RBF RBF 201.95 1771.85
91. RPS25 ENSGALG00000007699 201.95 1771.85 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
92. ATP6V1G1 ENSGALG00000007190 193.98 1701.92 ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
93. CHPKCI CHPKCI 193.98 1701.92
94. UQCR10 ENSGALG00000008066 193.98 1701.92 ubiquinol-cytochrome c reductase, complex III subunit X [Source:NCBI gene;Acc:770937]
95. PHB2 ENSGALG00000014567 191.32 1678.59 prohibitin 2 [Source:NCBI gene;Acc:771124]
96. UQCRH ENSGALG00000017380 188.66 1655.25 ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
97. HNRNPA0 ENSGALG00000006160 186.01 1632.00 heterogeneous nuclear ribonucleoprotein A0 [Source:HGNC Symbol;Acc:HGNC:5030]
98. RPL15 ENSGALG00000011290 183.35 1608.66 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
99. RPS15 ENSGALG00000015195 180.69 1585.32 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
100. FKBP12 FKBP12 172.72 1515.39
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA