Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vps54

Gene Name Gene ID Reads Annotation
vps54 ENSDARG00000102960 143 vacuolar protein sorting 54 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-081022-176]










Genes with expression patterns similar to vps54

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vps54 ENSDARG00000102960 143 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vacuolar protein sorting 54 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-081022-176]
2. stx8 ENSDARG00000103173 180 1.626 0.819 0.807 - - - - - - - syntaxin 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1360]
3. PLD5 PLD5 496 1.559 0.816 0.743 - - - - - - -
4. ppa1a ENSDARG00000099933 31 1.542 - - - - - 0.756 0.786 - - pyrophosphatase (inorganic) 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1695]
5. zdhhc14 ENSDARG00000037069 479 1.542 - 0.795 - - - - 0.747 - - zinc finger, DHHC-type containing 14 [Source:ZFIN;Acc:ZDB-GENE-040724-21]
6. akap17a ENSDARG00000104768 275 1.536 0.715 - - - - 0.821 - - - A kinase (PRKA) anchor protein 17A [Source:ZFIN;Acc:ZDB-GENE-040426-1460]
7. SOWAHA SOWAHA 419 1.527 0.796 0.731 - - - - - - -
8. fpr1 ENSDARG00000042984 66 1.511 0.790 - - - - - 0.721 - - formyl peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-121227-2]
9. ECI2 ENSDARG00000102412 848 1.504 0.713 0.791 - - - - - - - enoyl-CoA delta isomerase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-392]
10. tpra ENSDARG00000103004 111 1.501 - 0.768 - - - - 0.733 - - translocated promoter region a, nuclear basket protein [Source:ZFIN;Acc:ZDB-GENE-081104-2]
11. spire1a ENSDARG00000035868, ENSDARG00000109651 185 1.472 0.728 - - - - - 0.744 - - spire-type actin nucleation factor 1a [Source:ZFIN;Acc:ZDB-GENE-061013-119]
12. slc5a2 ENSDARG00000100919 47 0.979 - 0.979 - - - - - - - solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2498]
13. eepd1 ENSDARG00000071116 176 0.964 - 0.964 - - - - - - - endonuclease/exonuclease/phosphatase family domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1831]
14. slc16a9a ENSDARG00000013926, ENSDARG00000113368 64 0.933 - 0.933 - - - - - - - solute carrier family 16, member 9a [Source:ZFIN;Acc:ZDB-GENE-040426-1364]
15. CU234171.2 CU234171.2 86 0.93 - - - - - - 0.930 - -
16. cx28.6 ENSDARG00000003925 146 0.924 - 0.924 - - - - - - - connexin 28.6 [Source:ZFIN;Acc:ZDB-GENE-040406-4]
17. si:dkeyp-27b10.1 si:dkeyp-27b10.1 9 0.924 - 0.924 - - - - - - -
18. nxt2 ENSDARG00000061527, ENSDARG00000113656 277 0.914 0.914 - - - - - - - - nuclear transport factor 2-like export factor 2 [Source:ZFIN;Acc:ZDB-GENE-050521-1]
19. tp53i11a ENSDARG00000069430 65 0.906 - - - - - - 0.906 - - tumor protein p53 inducible protein 11a [Source:ZFIN;Acc:ZDB-GENE-050306-58]
20. BX640398.1 ENSDARG00000097190 219 0.896 - 0.896 - - - - - - -
21. trappc9 ENSDARG00000103106 460 0.894 0.894 - - - - - - - - trafficking protein particle complex 9 [Source:ZFIN;Acc:ZDB-GENE-070705-261]
22. wdr54 ENSDARG00000010248 245 0.887 0.887 - - - - - - - - WD repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040801-151]
23. tmem79b ENSDARG00000076861 154 0.884 - - - - - - 0.884 - - transmembrane protein 79b [Source:ZFIN;Acc:ZDB-GENE-120807-1]
24. zgc:173726 ENSDARG00000077078 250 0.884 - 0.884 - - - - - - - zgc:173726 [Source:ZFIN;Acc:ZDB-GENE-071004-108]
25. si:ch211-120e1.6 si:ch211-120e1.6 292 0.883 0.883 - - - - - - - -
26. acad8 ENSDARG00000042658, ENSDARG00000116771 259 0.882 0.882 - - - - - - - - acyl-CoA dehydrogenase family, member 8 [Source:ZFIN;Acc:ZDB-GENE-040426-828]
27. si:ch211-194e15.5 ENSDARG00000061804 253 0.878 - 0.878 - - - - - - - si:ch211-194e15.5 [Source:ZFIN;Acc:ZDB-GENE-060503-393]
28. cilp2 ENSDARG00000013687 70 0.878 - - - - - 0.878 - - - cartilage intermediate layer protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-436]
29. nfkb2 ENSDARG00000038687, ENSDARG00000112821 468 0.877 0.877 - - - - - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:ZFIN;Acc:ZDB-GENE-030131-6701]
30. smu1 smu1 982 0.874 0.874 - - - - - - - -
31. cdc14ab ENSDARG00000057016 1016 0.874 - 0.874 - - - - - - - cell division cycle 14Ab [Source:ZFIN;Acc:ZDB-GENE-070705-309]
32. pnp5b ENSDARG00000099802 551 0.871 - 0.871 - - - - - - - purine nucleoside phosphorylase 5b [Source:ZFIN;Acc:ZDB-GENE-040912-54]
33. ccdc82 ENSDARG00000014966 563 0.866 - - - - - - 0.866 - - coiled-coil domain containing 82 [Source:ZFIN;Acc:ZDB-GENE-030131-5749]
34. narf_1 ENSDARG00000024184, ENSDARG00000110086 127 0.864 0.864 - - - - - - - - nuclear prelamin A recognition factor [Source:ZFIN;Acc:ZDB-GENE-040718-31]
35. CU459072.2 CU459072.2 322 0.863 - 0.863 - - - - - - -
36. RNF223 93 0.863 0.863 - - - - - - - - ring finger protein 223
37. smad6a ENSDARG00000053209, ENSDARG00000110519 779 0.862 0.862 - - - - - - - - SMAD family member 6a [Source:ZFIN;Acc:ZDB-GENE-011015-1]
38. si:ch211-253p2.2 ENSDARG00000071772 64 0.86 0.860 - - - - - - - - si:ch211-253p2.2 [Source:ZFIN;Acc:ZDB-GENE-041111-272]
39. SNORA73_1 SNORA73_1 85 0.856 - - - - - - 0.856 - -
40. tshz3a ENSDARG00000087394 2455 0.854 - 0.854 - - - - - - - teashirt zinc finger homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-100322-1]
41. adhfe1 ENSDARG00000053518 499 0.853 0.853 - - - - - - - - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
42. sphk2 ENSDARG00000069893 1518 0.853 0.853 - - - - - - - - sphingosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-100922-225]
43. DYRK3 ENSDARG00000070600, ENSDARG00000115625 127 0.851 - - - - - - 0.851 - - dual specificity tyrosine phosphorylation regulated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-080219-31]
44. SRPK2 446 0.851 - 0.851 - - - - - - - SRSF protein kinase 2, transcript variant X4
45. BX649431.1 ENSDARG00000098522 13 0.851 - - - - - - 0.851 - -
46. oaz2b ENSDARG00000059815 38 0.851 - - - - - - 0.851 - - ornithine decarboxylase antizyme 2b [Source:ZFIN;Acc:ZDB-GENE-070313-1]
47. arl9 ENSDARG00000071881 403 0.851 - 0.851 - - - - - - - ADP-ribosylation factor-like 9 [Source:ZFIN;Acc:ZDB-GENE-060825-210]
48. BX323064.1 ENSDARG00000099914 11 0.851 - - - - - - 0.851 - -
49. si:ch211-127i16.2 ENSDARG00000092976, ENSDARG00000116049 152 0.85 0.850 - - - - - - - - si:ch211-127i16.2 [Source:ZFIN;Acc:ZDB-GENE-091204-54]
50. gnat2 ENSDARG00000042529 112 0.85 - - - - - - 0.850 - - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
51. USP38 ENSDARG00000075798 285 0.849 - - - - - 0.849 - - - ubiquitin specific peptidase 38 [Source:ZFIN;Acc:ZDB-GENE-101007-2]
52. htatsf1 ENSDARG00000056649 2018 0.849 0.849 - - - - - - - - HIV-1 Tat specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1578]
53. si:ch211-283g2.1 ENSDARG00000046091 123 0.847 0.847 - - - - - - - - si:ch211-283g2.1 [Source:ZFIN;Acc:ZDB-GENE-060531-57]
54. GSK3B ENSDARG00000017803 275 0.847 - 0.847 - - - - - - - glycogen synthase kinase 3 beta [Source:ZFIN;Acc:ZDB-GENE-990714-4]
55. npr1b ENSDARG00000018750 174 0.846 0.846 - - - - - - - - natriuretic peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-100805-4]
56. tmem30c ENSDARG00000009430, ENSDARG00000117066 124 0.845 - 0.845 - - - - - - - transmembrane protein 30C [Source:ZFIN;Acc:ZDB-GENE-040426-1127]
57. r3hcc1 ENSDARG00000099593 188 0.845 - - - - - - 0.845 - - R3H domain and coiled-coil containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-146]
58. CABZ01069006.1 CABZ01069006.1 363 0.845 - 0.845 - - - - - - -
59. zgc:173548 ENSDARG00000070048 558 0.844 0.844 - - - - - - - - zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
60. six4.3 six4.3 492 0.842 0.842 - - - - - - - -
61. BX510926.2 BX510926.2 12 0.841 - - - - - - 0.841 - -
62. MASP1 ENSDARG00000068726 34 0.841 - - - - - - 0.841 - - mannan-binding lectin serine peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-110421-4]
63. CABZ01064968.2 CABZ01064968.2 20 0.841 - - - - - - 0.841 - -
64. CU928217.1 CU928217.1 12 0.841 - - - - - - 0.841 - -
65. plxdc1 ENSDARG00000078417 41 0.841 - - - - - - 0.841 - - plexin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-391]
66. si:busm1-228j01.5 si:busm1-228j01.5 9 0.841 - - - - - - 0.841 - -
67. GPR4 ENSDARG00000079479 92 0.841 - - - - - - 0.841 - - G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-101202-1]
68. FP015791.1 FP015791.1 90 0.841 - - - - - - 0.841 - -
69. prmt2 ENSDARG00000063212 146 0.84 - - - - - 0.840 - - - protein arginine methyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041104-1]
70. ldlr ldlr 35 0.839 - - - - - - 0.839 - -
71. pgls ENSDARG00000021233 264 0.839 0.839 - - - - - - - - 6-phosphogluconolactonase [Source:ZFIN;Acc:ZDB-GENE-040822-9]
72. creg1 ENSDARG00000105154 843 0.839 0.839 - - - - - - - - cellular repressor of E1A-stimulated genes 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2042]
73. si:dkey-16p19.5 ENSDARG00000092583 284 0.839 0.839 - - - - - - - - si:dkey-16p19.5 [Source:ZFIN;Acc:ZDB-GENE-120709-69]
74. mettl5 ENSDARG00000068893 159 0.839 0.839 - - - - - - - - methyltransferase like 5 [Source:ZFIN;Acc:ZDB-GENE-041010-21]
75. tmco4 ENSDARG00000078924 330 0.837 0.837 - - - - - - - - transmembrane and coiled-coil domains 4 [Source:ZFIN;Acc:ZDB-GENE-041008-216]
76. tfb1m ENSDARG00000040727 142 0.837 - - - - - 0.837 - - - transcription factor B1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-1010]
77. mmachc ENSDARG00000043877 29 0.836 - - - - - - 0.836 - - methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-030131-3167]
78. hbp1 ENSDARG00000028517 571 0.835 - 0.835 - - - - - - - HMG-box transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-414]
79. si:ch211-224l10.4 ENSDARG00000088762 36 0.835 0.835 - - - - - - - - si:ch211-224l10.4 [Source:ZFIN;Acc:ZDB-GENE-090312-125]
80. cenpo ENSDARG00000075619, ENSDARG00000111160 378 0.834 - 0.834 - - - - - - - centromere protein O [Source:ZFIN;Acc:ZDB-GENE-070928-16]
81. rcbtb1 ENSDARG00000036645 255 0.834 - 0.834 - - - - - - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
82. cyp2v1 ENSDARG00000018485 694 0.832 0.832 - - - - - - - - cytochrome P450, family 2, subfamily V, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040912-139]
83. smyd4 ENSDARG00000060983 106 0.832 - - - - - - 0.832 - - SET and MYND domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-248]
84. DCUN1D3 ENSDARG00000011493 319 0.831 0.831 - - - - - - - - defective in cullin neddylation 1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070928-2]
85. as3mt ENSDARG00000027572 187 0.831 0.831 - - - - - - - - arsenite methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060312-15]
86. rab25a ENSDARG00000058800 451 0.83 0.830 - - - - - - - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
87. tbrg1 ENSDARG00000074996 733 0.83 0.830 - - - - - - - - transforming growth factor beta regulator 1 [Source:ZFIN;Acc:ZDB-GENE-080220-62]
88. chic2 ENSDARG00000022690 184 0.83 - 0.830 - - - - - - - cysteine-rich hydrophobic domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-778]
89. CABZ01063556.1 ENSDARG00000116344 319 0.829 - - - - - - 0.829 - - L antigen family member 3 [Source:NCBI gene;Acc:100536597]
90. slc35b1 ENSDARG00000038213 465 0.829 0.829 - - - - - - - - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
91. esrra ENSDARG00000069266 84 0.828 0.828 - - - - - - - - estrogen-related receptor alpha [Source:ZFIN;Acc:ZDB-GENE-990415-68]
92. DOCK1 ENSDARG00000099093 21 0.828 0.828 - - - - - - - - dedicator of cytokinesis 1 [Source:ZFIN;Acc:ZDB-GENE-080108-5]
93. strumpellin 212 0.828 0.828 - - - - - - - - strumpellin
94. CR762484.2 CR762484.2 42 0.828 0.828 - - - - - - - -
95. pot1 ENSDARG00000079915 42 0.828 0.828 - - - - - - - - protection of telomeres 1 homolog [Source:ZFIN;Acc:ZDB-GENE-110324-1]
96. thap11 ENSDARG00000036055 238 0.828 0.828 - - - - - - - - THAP domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2121]
97. scaper ENSDARG00000023104 491 0.826 0.826 - - - - - - - - S-phase cyclin A-associated protein in the ER [Source:ZFIN;Acc:ZDB-GENE-060303-5]
98. ap1g1 ENSDARG00000102394 818 0.826 - - - - - - 0.826 - - adaptor related protein complex 1 subunit gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3187]
99. rhcgl1 ENSDARG00000007080, ENSDARG00000111618 28 0.825 0.825 - - - - - - - - Rh family, C glycoprotein, like 1 [Source:ZFIN;Acc:ZDB-GENE-060209-2]
100. si:dkey-286j17.3 si:dkey-286j17.3 8 0.825 0.825 - - - - - - - -

There are 475 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA