Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for spire1a

Gene Name Gene ID Reads Annotation
spire1a ENSDARG00000035868, ENSDARG00000109651 185 spire-type actin nucleation factor 1a [Source:ZFIN;Acc:ZDB-GENE-061013-119]










Genes with expression patterns similar to spire1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. spire1a ENSDARG00000035868, ENSDARG00000109651 185 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spire-type actin nucleation factor 1a [Source:ZFIN;Acc:ZDB-GENE-061013-119]
2. vav3a ENSDARG00000086623 498 1.694 - - - - - 0.853 0.841 - - vav 3 guanine nucleotide exchange factor a [Source:ZFIN;Acc:ZDB-GENE-091204-266]
3. rpain ENSDARG00000063021 186 1.654 0.791 - - - - - 0.863 - - RPA interacting protein [Source:ZFIN;Acc:ZDB-GENE-060825-212]
4. CABZ01063556.1 ENSDARG00000116344 319 1.64 - - - - - 0.778 0.862 - - L antigen family member 3 [Source:NCBI gene;Acc:100536597]
5. oaz2b ENSDARG00000059815 38 1.627 - - - - - 0.780 0.847 - - ornithine decarboxylase antizyme 2b [Source:ZFIN;Acc:ZDB-GENE-070313-1]
6. insl5a ENSDARG00000070966, ENSDARG00000112563 45 1.592 0.809 - - - - 0.783 - - - insulin-like 5a [Source:ZFIN;Acc:ZDB-GENE-050310-4]
7. MAZ MAZ 42 1.592 - - - - 0.750 - 0.842 - -
8. strumpellin 212 1.582 0.734 - - - - 0.848 - - - strumpellin
9. nkain4 ENSDARG00000062699 377 1.579 0.772 - - - - - 0.807 - - sodium/potassium transporting ATPase interacting 4 [Source:ZFIN;Acc:ZDB-GENE-080204-60]
10. TRAPPC8 ENSDARG00000038866 1343 1.573 - 0.731 - - - 0.842 - - - trafficking protein particle complex 8 [Source:ZFIN;Acc:ZDB-GENE-130530-601]
11. phf12a ENSDARG00000074303 1025 1.569 - - - - - 0.854 0.715 - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
12. obscn obscn 146 1.548 - - - - - 0.723 0.825 - -
13. dpp4 ENSDARG00000079420 1286 1.538 - - - - - 0.766 0.772 - - dipeptidyl-peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-081104-277]
14. caspa ENSDARG00000008165 286 1.518 - 0.816 - - - 0.702 - - - caspase a [Source:ZFIN;Acc:ZDB-GENE-000616-3]
15. EGFR_2 EGFR_2 71 1.511 - - - - - 0.805 0.706 - -
16. fam63a 381 1.501 0.745 - - - - 0.756 - - - family with sequence similarity 63, member A, transcript variant X1
17. BX323793.2 BX323793.2 61 1.496 - - - - - 0.745 0.751 - -
18. spdya ENSDARG00000059131 33 1.495 - - 0.729 - - 0.766 - - - speedy/RINGO cell cycle regulator family member A [Source:ZFIN;Acc:ZDB-GENE-041010-194]
19. TSTD1 TSTD1 608 1.494 - 0.743 - - - 0.751 - - -
20. adora2b ENSDARG00000002533 230 1.488 - 0.776 - - - - 0.712 - - adenosine A2b receptor [Source:ZFIN;Acc:ZDB-GENE-060511-1]
21. zgc:173575 ENSDARG00000078281, ENSDARG00000115456 190 1.481 0.754 - - - - 0.727 - - - zgc:173575 [Source:ZFIN;Acc:ZDB-GENE-080218-25]
22. tbrg1 ENSDARG00000074996 733 1.474 0.739 - - - - 0.735 - - - transforming growth factor beta regulator 1 [Source:ZFIN;Acc:ZDB-GENE-080220-62]
23. vps54 ENSDARG00000102960 143 1.472 0.728 - - - - - 0.744 - - vacuolar protein sorting 54 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-081022-176]
24. CABZ01084007.1 CABZ01084007.1 199 1.461 - 0.721 - - - - 0.740 - -
25. fam160a2 ENSDARG00000078188 546 1.441 0.705 0.736 - - - - - - - family with sequence similarity 160, member A2 [Source:ZFIN;Acc:ZDB-GENE-070912-291]
26. chsy1 ENSDARG00000079027 455 0.928 - 0.928 - - - - - - - chondroitin sulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3127]
27. irg1l ENSDARG00000062788 503 0.916 - - - - - - 0.916 - - immunoresponsive gene 1, like [Source:ZFIN;Acc:ZDB-GENE-061103-301]
28. CU634009.1 CU634009.1 165 0.91 - 0.910 - - - - - - -
29. acot11b ENSDARG00000042122 235 0.901 - - - - - 0.901 - - - acyl-CoA thioesterase 11b [Source:ZFIN;Acc:ZDB-GENE-051127-37]
30. CR932000.1 ENSDARG00000097733 40 0.9 - - - - - - 0.900 - -
31. CR848728.2 CR848728.2 99 0.899 - 0.899 - - - - - - -
32. SPINK4 ENSDARG00000091609 44 0.878 - - - - - - 0.878 - - serine peptidase inhibitor, Kazal type 4 [Source:ZFIN;Acc:ZDB-GENE-130821-1]
33. dak dak 139 0.877 - - - - - 0.877 - - -
34. si:ch73-52f15.5 ENSDARG00000095400 1368 0.874 - 0.874 - - - - - - - si:ch73-52f15.5 [Source:ZFIN;Acc:ZDB-GENE-091204-341]
35. dtymk ENSDARG00000052103 239 0.874 0.874 - - - - - - - - deoxythymidylate kinase (thymidylate kinase) [Source:ZFIN;Acc:ZDB-GENE-990603-11]
36. rtn4rl1a ENSDARG00000007856 242 0.874 0.874 - - - - - - - - reticulon 4 receptor-like 1a [Source:ZFIN;Acc:ZDB-GENE-091118-38]
37. si:dkey-58f10.6 ENSDARG00000094489 123 0.872 - 0.872 - - - - - - - si:dkey-58f10.6 [Source:ZFIN;Acc:ZDB-GENE-060526-320]
38. pmaip1 ENSDARG00000089307 236 0.871 0.871 - - - - - - - - phorbol-12-myristate-13-acetate-induced protein 1 [Source:ZFIN;Acc:ZDB-GENE-070119-3]
39. wdr35 ENSDARG00000069269 492 0.868 - - - - - 0.868 - - - WD repeat domain 35 [Source:ZFIN;Acc:ZDB-GENE-060810-148]
40. tmem161b ENSDARG00000055989 680 0.867 - - - - - 0.867 - - - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
41. stx6 ENSDARG00000042742, ENSDARG00000115635 1208 0.866 - 0.866 - - - - - - - syntaxin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-858]
42. exosc7 ENSDARG00000100060 190 0.866 0.866 - - - - - - - - exosome component 7 [Source:ZFIN;Acc:ZDB-GENE-050417-47]
43. C9H2orf76 C9H2orf76 559 0.866 - 0.866 - - - - - - -
44. lims1 ENSDARG00000026985 2072 0.864 - - - - - 0.864 - - - LIM and senescent cell antigen-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-050522-236]
45. relb ENSDARG00000086173 762 0.863 - - - - - 0.863 - - - v-rel avian reticuloendotheliosis viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-030131-9531]
46. plk4 ENSDARG00000004576 688 0.863 0.863 - - - - - - - - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
47. wnt3 ENSDARG00000038990, ENSDARG00000111277 626 0.863 - - - - - - 0.863 - - wingless-type MMTV integration site family, member 3 [Source:ZFIN;Acc:ZDB-GENE-081003-1]
48. rusc2 ENSDARG00000095288 649 0.861 - 0.861 - - - - - - - RUN and SH3 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-131]
49. crfb8 crfb8 392 0.86 - 0.860 - - - - - - -
50. st6gal2l st6gal2l 292 0.856 - - - - - - 0.856 - -
51. ppcdc ENSDARG00000033020, ENSDARG00000109858 563 0.855 - - - - - 0.855 - - - phosphopantothenoylcysteine decarboxylase [Source:ZFIN;Acc:ZDB-GENE-040426-1749]
52. GPR4 ENSDARG00000079479 92 0.855 - - - - - - 0.855 - - G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-101202-1]
53. FP015791.1 FP015791.1 90 0.855 - - - - - - 0.855 - -
54. ppp1r12c ENSDARG00000052423 183 0.855 - - - - - 0.855 - - - protein phosphatase 1, regulatory subunit 12C [Source:ZFIN;Acc:ZDB-GENE-010724-11]
55. zgc:172049 zgc:172049 175 0.855 - 0.855 - - - - - - -
56. si:busm1-228j01.5 si:busm1-228j01.5 9 0.855 - - - - - - 0.855 - -
57. CU928217.1 CU928217.1 12 0.855 - - - - - - 0.855 - -
58. METTL24 ENSDARG00000075817 126 0.855 - - - - - - 0.855 - - methyltransferase like 24 [Source:ZFIN;Acc:ZDB-GENE-070424-138]
59. plxdc1 ENSDARG00000078417 41 0.855 - - - - - - 0.855 - - plexin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-391]
60. BX510926.2 BX510926.2 12 0.855 - - - - - - 0.855 - -
61. MASP1 ENSDARG00000068726 34 0.855 - - - - - - 0.855 - - mannan-binding lectin serine peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-110421-4]
62. CABZ01064968.2 CABZ01064968.2 20 0.855 - - - - - - 0.855 - -
63. smyd4 ENSDARG00000060983 106 0.852 - - - - - - 0.852 - - SET and MYND domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-248]
64. gnat2 ENSDARG00000042529 112 0.85 - - - - - - 0.850 - - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
65. C3AR1 18 0.85 - - - - - - 0.850 - - C3a anaphylatoxin chemotactic receptor
66. slmapa ENSDARG00000054458 966 0.849 - - - - - 0.849 - - - sarcolemma associated protein a [Source:ZFIN;Acc:ZDB-GENE-061013-184]
67. btr21 ENSDARG00000058329, ENSDARG00000100450 120 0.847 - - - - - - 0.847 - - bloodthirsty-related gene family, member 21 [Source:ZFIN;Acc:ZDB-GENE-081031-80]
68. slc35e4 ENSDARG00000009459, ENSDARG00000109666 114 0.845 - - - - - - 0.845 - - solute carrier family 35, member E4 [Source:ZFIN;Acc:ZDB-GENE-050417-407]
69. gprc6a ENSDARG00000005371 7 0.845 - - - - - - 0.845 - - G protein-coupled receptor, class C, group 6, member A [Source:ZFIN;Acc:ZDB-GENE-041217-22]
70. trappc9 ENSDARG00000103106 460 0.845 0.845 - - - - - - - - trafficking protein particle complex 9 [Source:ZFIN;Acc:ZDB-GENE-070705-261]
71. F8A3 F8A3 646 0.844 - - - - - 0.844 - - -
72. si:dkey-98j1.5 ENSDARG00000094005 10 0.842 - - - - - - 0.842 - - si:dkey-98j1.5 [Source:ZFIN;Acc:ZDB-GENE-090313-358]
73. FP102163.1 FP102163.1 1 0.842 - - - - - - 0.842 - -
74. si:dkey-192d15.3 ENSDARG00000088682 1 0.842 - - - - - - 0.842 - - si:dkey-192d15.3 [Source:ZFIN;Acc:ZDB-GENE-040724-245]
75. SYCP2L 3 0.842 - - - - - - 0.842 - - synaptonemal complex protein 2-like, transcript variant X3
76. RD3L RD3L 15 0.842 - - - - - - 0.842 - -
77. hfm1 ENSDARG00000104288 9 0.842 - - - - - - 0.842 - - HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-43]
78. zgc:152791 ENSDARG00000039243 1 0.842 - - - - - - 0.842 - - zgc:152791 [Source:ZFIN;Acc:ZDB-GENE-060901-4]
79. CABZ01049362.1 ENSDARG00000099508 570 0.842 - - - - - - 0.842 - -
80. TOR4A TOR4A 70 0.842 - - - - - - 0.842 - -
81. eng2b eng2b 865 0.842 - - - - - - 0.842 - -
82. chia.6 ENSDARG00000093193, ENSDARG00000116259 25 0.842 - - - - - - 0.842 - - chitinase, acidic.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1140]
83. FLVCR2 FLVCR2 5 0.842 - - - - - - 0.842 - -
84. si:ch211-222b21.5 si:ch211-222b21.5 10 0.842 - - - - - - 0.842 - -
85. abcc5 ENSDARG00000061233 60 0.842 - - - - - - 0.842 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 5 [Source:ZFIN;Acc:ZDB-GENE-050517-17]
86. FAIM2 FAIM2 43 0.842 - - - - - - 0.842 - -
87. C3_3 C3_3 2 0.842 - - - - - - 0.842 - -
88. zgc:162180 zgc:162180 31 0.842 - - - - - - 0.842 - -
89. hsf4 ENSDARG00000013251 5 0.842 - - - - - - 0.842 - - heat shock transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-050306-18]
90. PIP4K2C PIP4K2C 5 0.842 - - - - - - 0.842 - -
91. HIST1H2BA_1 ENSDARG00000116654 37 0.842 - - - - - - 0.842 - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
92. PLA2G4C_2 PLA2G4C_2 10 0.842 - - - - - - 0.842 - -
93. si:dkey-42h23.2 si:dkey-42h23.2 1 0.842 - - - - - - 0.842 - -
94. si:ch73-155e10.1 si:ch73-155e10.1 13 0.842 - - - - - - 0.842 - -
95. fto ENSDARG00000044216 33 0.842 - - - - - - 0.842 - - fat mass and obesity associated [Source:ZFIN;Acc:ZDB-GENE-061108-1]
96. unc93b1 ENSDARG00000069114 37 0.842 - - - - - - 0.842 - - unc-93 homolog B1, TLR signaling regulator [Source:ZFIN;Acc:ZDB-GENE-130424-1]
97. zgc:173737 ENSDARG00000058299 6 0.842 - - - - - - 0.842 - - zgc:173737 [Source:ZFIN;Acc:ZDB-GENE-071004-109]
98. OCEL1 OCEL1 27 0.842 - - - - - - 0.842 - -
99. ENSDARG00000088912 ENSDARG00000088912 8 0.842 - - - - - - 0.842 - -
100. TSG101_2 TSG101_2 1 0.842 - - - - - - 0.842 - -

There are 880 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA