Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ubxn1_1

Gene Name Gene ID Reads Annotation
ubxn1_1 ENSDARG00000090309 38 UBX domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-792]










Genes with expression patterns similar to ubxn1_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ubxn1_1 ENSDARG00000090309 38 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 UBX domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-792]
2. CU672227.1 ENSDARG00000105807 15 1.913 - - - - 0.931 - 0.982 - -
3. si:ch211-152p11.8 46 1.892 - 0.908 - - - - 0.984 - - si:ch211-152p11.8, transcript variant X2
4. si:ch211-10j20.7 si:ch211-10j20.7 8 1.831 0.849 - - - - - 0.982 - -
5. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1.831 0.849 - - - - - 0.982 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
6. CR677591.1 CR677591.1 19 1.818 - - - - 0.898 - 0.920 - -
7. chst2b ENSDARG00000058585 33 1.774 0.849 - - - 0.925 - - - - carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [Source:ZFIN;Acc:ZDB-GENE-060720-33]
8. nr6a1a ENSDARG00000096224, ENSDARG00000101508 24 1.768 - 0.786 - - - - 0.982 - - nuclear receptor subfamily 6, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-991207-19]
9. ZNF337_11 ZNF337_11 11 1.762 0.849 - - - 0.913 - - - -
10. kcng1 ENSDARG00000099038 23 1.757 0.849 - - - 0.908 - - - - potassium voltage-gated channel, subfamily G, member 1 [Source:ZFIN;Acc:ZDB-GENE-080220-5]
11. g6pcb ENSDARG00000014967 8 1.749 - - - - - - 0.982 0.767 - glucose-6-phosphatase b, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081223-2]
12. kcnt1 ENSDARG00000079484 45 1.744 0.849 - - - - - 0.895 - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
13. si:dkeyp-53d3.3 ENSDARG00000098664 65 1.734 0.849 - - - - - 0.885 - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
14. C2CD3 ENSDARG00000074137 51 1.699 0.861 - - - - - 0.838 - - C2 calcium-dependent domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-104]
15. dmtn ENSDARG00000013110 791 1.687 0.890 - - - - - 0.797 - - dematin actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9438]
16. CSMD1 CSMD1 15 1.687 0.849 - - - - - 0.838 - -
17. CT025771.1 ENSDARG00000117721 13 1.664 - - 0.733 - 0.931 - - - -
18. si:ch73-57f22.2 ENSDARG00000087453 28 1.657 0.849 0.808 - - - - - - - si:ch73-57f22.2 [Source:ZFIN;Acc:ZDB-GENE-110411-58]
19. si:dkey-202n8.1 si:dkey-202n8.1 35 1.653 - 0.792 - - 0.861 - - - -
20. pou4f2 ENSDARG00000069737 451 1.646 0.854 0.792 - - - - - - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
21. disp2 ENSDARG00000042846 53 1.645 0.745 - - - - - 0.900 - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
22. cacng3b ENSDARG00000076401 91 1.631 0.822 - - - 0.809 - - - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
23. ube2b ENSDARG00000026035 51 1.619 0.772 0.847 - - - - - - - ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-040718-247]
24. si:dkey-10p5.7 26 1.603 - - - 0.708 - - 0.895 - - si:dkey-10p5.7
25. slc30a2 ENSDARG00000021305 4 1.601 0.861 - - - - - - - 0.740 solute carrier family 30 (zinc transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-347]
26. ntf7 ntf7 72 1.58 - - - - 0.853 - 0.727 - -
27. cep128 ENSDARG00000103771 75 1.577 0.790 - - - - - 0.787 - - centrosomal protein 128 [Source:ZFIN;Acc:ZDB-GENE-070410-34]
28. si:dkey-7n6.2 ENSDARG00000094602, ENSDARG00000111257 56 1.575 - - - 0.744 - - 0.831 - - si:dkey-7n6.2 [Source:ZFIN;Acc:ZDB-GENE-091204-262]
29. runx3 ENSDARG00000052826 247 1.558 0.777 0.781 - - - - - - - runt-related transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-000605-2]
30. ENSDARG00000086878 ENSDARG00000086878 332 1.543 0.769 - - - - - 0.774 - -
31. FANCA ENSDARG00000098241 39 1.543 - - 0.804 - - - 0.739 - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
32. polg2 ENSDARG00000074933 117 1.518 - 0.786 - - - - 0.732 - - polymerase (DNA directed), gamma 2, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060810-116]
33. si:ch211-76l23.6 si:ch211-76l23.6 68 1.513 - - 0.777 - - - 0.736 - -
34. C9HXorf36 C9HXorf36 44 1.497 - - - - 0.765 - 0.732 - -
35. si:dkey-117n7.2 ENSDARG00000093135 40 1.489 - - 0.713 - 0.776 - - - - si:dkey-117n7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-49]
36. si:dkey-165i8.5 si:dkey-165i8.5 21 1.465 0.712 - - - - - 0.753 - -
37. MAP4 MAP4 315 1 - 1.000 - - - - - - -
38. mctp1b ENSDARG00000060871 20 0.984 - - - - - - 0.984 - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
39. NFATC4 ENSDARG00000054162 44 0.984 - - - - - - 0.984 - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
40. kcnip3a ENSDARG00000034229 63 0.984 - - - - - - 0.984 - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
41. dio2 ENSDARG00000094857 17 0.984 - - - - - - 0.984 - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
42. si:ch73-60p2.1 si:ch73-60p2.1 21 0.984 - - - - - - 0.984 - -
43. tlr4ba ENSDARG00000019742, ENSDARG00000113084 20 0.984 - - - - - - 0.984 - - toll-like receptor 4b, duplicate a [Source:ZFIN;Acc:ZDB-GENE-040219-8]
44. si:ch211-63o20.7 ENSDARG00000042000 93 0.984 - - - - - - 0.984 - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
45. si:ch211-122l24.5 si:ch211-122l24.5 1 0.982 - - - - - - 0.982 - -
46. TMEM138 ENSDARG00000090543 105 0.982 - - - - - - 0.982 - - transmembrane protein 138 [Source:ZFIN;Acc:ZDB-GENE-120912-1]
47. sh2d1aa ENSDARG00000095348 4 0.982 - - - - - - 0.982 - - SH2 domain containing 1A duplicate a [Source:ZFIN;Acc:ZDB-GENE-060526-212]
48. grk7b ENSDARG00000055534 17 0.982 - - - - - - 0.982 - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
49. dctn1a ENSDARG00000019743 45 0.982 - - - - - - 0.982 - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
50. C25H12orf29 C25H12orf29 31 0.982 - - - - - - 0.982 - -
51. wnt3a ENSDARG00000058822 5 0.982 - - - - - - 0.982 - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
52. CR762480.2 ENSDARG00000102728 1 0.982 - - - - - - 0.982 - -
53. pdcb ENSDARG00000017634 10 0.982 - - - - - - 0.982 - - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
54. avpr2aa ENSDARG00000007436 43 0.982 - - - - - - 0.982 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
55. nitr3a_1 ENSDARG00000110676 44 0.982 - - - - - - 0.982 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
56. urgcp ENSDARG00000036767 6 0.982 - - - - - - 0.982 - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
57. si:ch211-239f4.6 ENSDARG00000093347 2 0.982 - - - - - - 0.982 - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
58. nanog ENSDARG00000075113 10 0.982 - - - - - - 0.982 - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
59. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 0.982 - - - - - - 0.982 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
60. CU929052.1 CU929052.1 642 0.982 - - - - - - 0.982 - -
61. slc5a1 ENSDARG00000013871 4 0.982 - - - - - - 0.982 - - solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1524]
62. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 0.982 - - - - - - 0.982 - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
63. SPDEF ENSDARG00000029930 60 0.982 - - - - - - 0.982 - - SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
64. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 0.982 - - - - - - 0.982 - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
65. zgc:173443 ENSDARG00000034403 26 0.982 - - - - - - 0.982 - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
66. CR854891.1 CR854891.1 7 0.982 - - - - - - 0.982 - -
67. si:dkeyp-91h9.1 si:dkeyp-91h9.1 2 0.982 - - - - - - 0.982 - -
68. CABZ01002626.1 CABZ01002626.1 29 0.982 - - - - - - 0.982 - -
69. si:ch73-77n15.1 si:ch73-77n15.1 2 0.982 - - - - - - 0.982 - -
70. mmrn2a ENSDARG00000076135 37 0.982 - - - - - - 0.982 - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
71. si:dkey-28k24.2 ENSDARG00000095106, ENSDARG00000104787, ENSDARG00000110878, ENSDARG00000116574 1 0.982 - - - - - - 0.982 - - si:dkey-28k24.2 [Source:ZFIN;Acc:ZDB-GENE-121213-4]
72. si:dkey-58f10.11 ENSDARG00000094935 1 0.982 - - - - - - 0.982 - - si:dkey-58f10.11 [Source:ZFIN;Acc:ZDB-GENE-060526-313]
73. top3b ENSDARG00000027586 8 0.982 - - - - - - 0.982 - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
74. cx55.5 13 0.982 - - - - - - 0.982 - - connexin 55.5, transcript variant X1
75. b3gat3 ENSDARG00000001939 58 0.982 - - - - - - 0.982 - - beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-020419-3]
76. SIKE1 2 0.982 - - - - - - 0.982 - - suppressor of IKBKE 1, transcript variant X3
77. gabrr2b ENSDARG00000014057 9 0.982 - - - - - - 0.982 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
78. si:ch211-190k17.13 si:ch211-190k17.13 48 0.982 - - - - - - 0.982 - -
79. traf1 ENSDARG00000069482 50 0.982 - - - - - - 0.982 - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
80. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 0.982 - - - - - - 0.982 - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
81. PLEKHS1_2 PLEKHS1_2 21 0.982 - - - - - - 0.982 - -
82. si:ch211-283l16.1 ENSDARG00000112586 131 0.982 - - - - - - 0.982 - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
83. CECR6 25 0.982 - - - - - - 0.982 - - cat eye syndrome chromosome region, candidate 6
84. CELA1 CELA1 14 0.982 - - - - - - 0.982 - -
85. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 0.982 - - - - - - 0.982 - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
86. mtus2 mtus2 22 0.982 - - - - - - 0.982 - -
87. si:ch211-199m9.2 si:ch211-199m9.2 9 0.982 - - - - - - 0.982 - -
88. cart1 ENSDARG00000070930 46 0.982 - - - - - - 0.982 - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
89. MMP20 MMP20 1 0.982 - - - - - - 0.982 - -
90. CLNK 8 0.982 - - - - - - 0.982 - - cytokine dependent hematopoietic cell linker
91. si:dkey-41e15.4 si:dkey-41e15.4 1 0.982 - - - - - - 0.982 - -
92. bdkrb1 ENSDARG00000020744 4 0.982 - - - - - - 0.982 - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
93. st6galnac ENSDARG00000086292 29 0.982 - - - - - - 0.982 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
94. gcnt3 ENSDARG00000060471 37 0.982 - - - - - - 0.982 - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
95. FRMD7 ENSDARG00000068958 17 0.982 - - - - - - 0.982 - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
96. ATP13A5 ATP13A5 13 0.982 - - - - - - 0.982 - -
97. PCDH10 PCDH10 7 0.982 - - - - - - 0.982 - -
98. pth2r ENSDARG00000006678, ENSDARG00000112414 46 0.982 - - - - - - 0.982 - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
99. CU855711.1 ENSDARG00000088643 6 0.982 - - - - - - 0.982 - - legumain-like [Source:NCBI gene;Acc:108191752]
100. zgc:172133 ENSDARG00000075248 6 0.982 - - - - - - 0.982 - - zgc:172133 [Source:ZFIN;Acc:ZDB-GENE-080204-48]

There are 1174 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA