Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-56i24.1

Gene Name Gene ID Reads Annotation
si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]










Genes with expression patterns similar to si:dkey-56i24.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
2. BX548021.2 BX548021.2 4 3 1.000 1.000 - - - - - 1.000 -
3. si:ch211-10j20.7 si:ch211-10j20.7 8 3 1.000 1.000 - - - - 1.000 - -
4. CSMD1 CSMD1 15 2.587 1.000 0.731 - - - - 0.856 - -
5. CABZ01065506.1 CABZ01065506.1 204 2 1.000 1.000 - - - - - - -
6. PGBD4 ENSDARG00000079328 20 2 1.000 1.000 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
7. SEMA6B SEMA6B 35 2 - 1.000 - - - - 1.000 - -
8. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 2 - 1.000 - - - - 1.000 - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
9. ccdc64 ccdc64 2 2 - 1.000 - - - - - 1.000 -
10. nitr3a_1 ENSDARG00000110676 44 2 - 1.000 - - - - 1.000 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
11. si:dkey-4j21.1 17 2 1.000 1.000 - - - - - - - si:dkey-4j21.1, transcript variant X2
12. lppr5b lppr5b 23 2 1.000 1.000 - - - - - - -
13. grid2 ENSDARG00000055302, ENSDARG00000110593 1 2 - 1.000 - - - - - 1.000 - glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
14. si:dkey-56m15.4 si:dkey-56m15.4 39 2 1.000 1.000 - - - - - - -
15. CR847504.1 ENSDARG00000102515 29 1.958 - 1.000 - - - - 0.958 - -
16. CABZ01117437.1 CABZ01117437.1 11 1.945 0.945 - - - - - - 1.000 -
17. kcnip3a ENSDARG00000034229 63 1.933 - 1.000 - - - - 0.933 - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
18. si:dkeyp-53d3.3 ENSDARG00000098664 65 1.904 1.000 - - - - - 0.904 - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
19. helt ENSDARG00000056400 482 1.896 1.000 0.896 - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
20. BX321871.2 BX321871.2 1 1.885 - 1.000 - - - - - - 0.885
21. si:dkey-200l5.4 ENSDARG00000095294 13 1.885 1.000 - - - - - - - 0.885 si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
22. si:ch211-215c18.3 ENSDARG00000095308 11 1.885 1.000 - - - - - - - 0.885 si:ch211-215c18.3 [Source:ZFIN;Acc:ZDB-GENE-060526-105]
23. cnn1b ENSDARG00000102398 40 1.883 1.000 0.883 - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
24. PPFIA3 ENSDARG00000077053 310 1.879 0.879 1.000 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
25. TENM2 ENSDARG00000037122 48 1.878 0.878 1.000 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
26. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.874 0.874 1.000 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
27. BX511021.2 ENSDARG00000097646 5 1.869 - - - - 0.869 - 1.000 - -
28. XKR7 ENSDARG00000026333 175 1.856 0.856 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
29. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.854 0.854 1.000 - - - - - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
30. ubxn1_1 ENSDARG00000090309 38 1.831 0.849 - - - - - 0.982 - - UBX domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-792]
31. si:dkey-148e22.3 si:dkey-148e22.3 4 1.813 - - - - - - 1.000 - 0.813
32. GADD45G GADD45G 382 1.813 0.813 1.000 - - - - - - -
33. kcnt1 ENSDARG00000079484 45 1.794 1.000 - - - - - 0.794 - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
34. WNK3 WNK3 36 1.794 - 1.000 - - - - 0.794 - -
35. zgc:194665 ENSDARG00000004577 136 1.783 0.783 1.000 - - - - - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
36. il11a ENSDARG00000037859 5 1.771 0.771 - - - - - 1.000 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
37. SACS ENSDARG00000091042 15 1.769 - 1.000 - - - - - - 0.769 sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
38. gpr22 gpr22 115 1.766 0.766 1.000 - - - - - - -
39. 5S_rRNA_6 5S_rRNA_6 11 1.766 0.802 - - - - - - 0.964 -
40. BEGAIN BEGAIN 39 1.756 1.000 - - - 0.756 - - - -
41. scin ENSDARG00000010728, ENSDARG00000111092 437 1.752 0.752 1.000 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
42. disp2 ENSDARG00000042846 53 1.751 0.896 - - - - - 0.855 - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
43. cep128 ENSDARG00000103771 75 1.746 0.940 - - - - - 0.806 - - centrosomal protein 128 [Source:ZFIN;Acc:ZDB-GENE-070410-34]
44. npffr1l3 ENSDARG00000010712 18 1.731 - 0.731 - - - - 1.000 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
45. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.73 0.730 1.000 - - - - - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
46. VASH1 ENSDARG00000092716 33 1.728 1.000 - - - - - - 0.728 - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
47. rtn4r ENSDARG00000090035 46 1.709 1.000 0.709 - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
48. CU929052.1 CU929052.1 642 1.708 - - - - 0.708 - 1.000 - -
49. ptprc ENSDARG00000071437 104 1.704 1.000 0.704 - - - - - - - protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
50. CABZ01029822.1 ENSDARG00000086931 1654 1.679 0.883 0.796 - - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
51. cnih3 ENSDARG00000014953 25 1.67 0.939 0.731 - - - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
52. diras1a ENSDARG00000028066 126 1.67 0.853 - - - 0.817 - - - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
53. si:ch211-237l4.6 ENSDARG00000056915 49 1.669 - - - - 0.755 - 0.914 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
54. C2CD3 ENSDARG00000074137 51 1.658 0.802 - - - - - 0.856 - - C2 calcium-dependent domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-104]
55. GABRR1 ENSDARG00000043902 71 1.649 - - - - - - 0.924 - 0.725 gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
56. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.648 0.826 0.822 - - - - - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
57. si:dkey-165i8.5 si:dkey-165i8.5 21 1.627 0.854 - - - - - 0.773 - -
58. si:dkey-1h6.8 ENSDARG00000096703 45 1.611 0.771 - - - - - 0.840 - - si:dkey-1h6.8 [Source:ZFIN;Acc:ZDB-GENE-130603-8]
59. grnas ENSDARG00000091885 71 1.605 - 0.731 - - - - 0.874 - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
60. abcg1 ENSDARG00000063475 97 1.588 - - - - 0.865 - 0.723 - - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
61. dmtn ENSDARG00000013110 791 1.531 0.810 - - - - - 0.721 - - dematin actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9438]
62. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.506 0.752 0.754 - - - - - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
63. atp2b3b ENSDARG00000023445 1424 1.503 0.787 0.716 - - - - - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
64. syngr3b ENSDARG00000025034 290 1.44 0.721 0.719 - - - - - - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
65. si:ch211-76l23.6 si:ch211-76l23.6 68 1.41 - 0.709 - - - - 0.701 - -
66. BICD1 BICD1 9 1 1.000 - - - - - - - -
67. si:dkey-203o14.2 si:dkey-203o14.2 5 1 1.000 - - - - - - - -
68. sox8 sox8 109 1 - 1.000 - - - - - - -
69. kcnj14 ENSDARG00000075914 38 1 - 1.000 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 14 [Source:ZFIN;Acc:ZDB-GENE-100922-48]
70. slc6a2 ENSDARG00000016141 49 1 - - - - - - 1.000 - - solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
71. si:ch211-113a14.14 si:ch211-113a14.14 3 1 1.000 - - - - - - - -
72. BTBD17 BTBD17 53 1 - 1.000 - - - - - - -
73. lrch4 ENSDARG00000068258 24 1 1.000 - - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
74. frmd7 ENSDARG00000068958 1 1 - - - - - - - 1.000 - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
75. si:dkeyp-3f10.17 ENSDARG00000087254 1 1 - - - - - - 1.000 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
76. vwc2 ENSDARG00000076495 22 1 - 1.000 - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
77. dap1b_1 ENSDARG00000086842, ENSDARG00000109678 830 1 - 1.000 - - - - - - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
78. si:ch73-346o4.3 si:ch73-346o4.3 29 1 - 1.000 - - - - - - -
79. slc6a18 ENSDARG00000068387 6 1 - - - - - - 1.000 - - solute carrier family 6 (neutral amino acid transporter), member 18 [Source:ZFIN;Acc:ZDB-GENE-080219-9]
80. zgc:101731 ENSDARG00000040965 27 1 1.000 - - - - - - - - zgc:101731 [Source:ZFIN;Acc:ZDB-GENE-040912-57]
81. zmiz2 ENSDARG00000098683 1 1 - 1.000 - - - - - - - zinc finger, MIZ-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-285]
82. abcb3l1 1 1 - - - - - - - 1.000 - ATP-binding cassette, sub-family B (MDR/TAP), member 3 like 1
83. LRP3 ENSDARG00000008485 1401 1 - 1.000 - - - - - - - low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
84. si:ch211-233m11.3 si:ch211-233m11.3 1 1 - - - - - - 1.000 - -
85. c3c c3c 174 1 - 1.000 - - - - - - -
86. smad6b ENSDARG00000031763 12 1 - - - - - - 1.000 - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
87. CR387932.1 ENSDARG00000097344 2 1 - - - - - - 1.000 - -
88. atf1 ENSDARG00000044301, ENSDARG00000109865 2 1 - 1.000 - - - - - - - activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
89. ZC3H12A ENSDARG00000005271 5 1 - - - - - - 1.000 - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
90. BX649314.1 BX649314.1 3 1 1.000 - - - - - - - -
91. gata4 ENSDARG00000098952 11 1 - - - - - - 1.000 - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
92. si:dkey-273g18.1_1 ENSDARG00000097405, ENSDARG00000105439 5 1 - 1.000 - - - - - - - si:dkey-273g18.1 [Source:ZFIN;Acc:ZDB-GENE-060503-256]
93. lgalslb ENSDARG00000055525 18 1 - 1.000 - - - - - - - lectin, galactoside-binding-like b [Source:ZFIN;Acc:ZDB-GENE-030616-570]
94. CU855821.2 CU855821.2 21 1 - 1.000 - - - - - - -
95. ZNF784_2 ZNF784_2 181 1 1.000 - - - - - - - -
96. LRRC69 LRRC69 1 1 - - - - - - 1.000 - -
97. KCNJ6 ENSDARG00000058985 71 1 - 1.000 - - - - - - - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
98. BX323836.1 BX323836.1 1 1 - - - - - - 1.000 - -
99. CCDC50_1 CCDC50_1 1 1 - 1.000 - - - - - - -
100. wu:fj39g12 ENSDARG00000043460 8 1 1.000 - - - - - - - - wu:fj39g12 [Source:ZFIN;Acc:ZDB-GENE-030131-7901]

There are 1263 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA