Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for kcnip3a

Gene Name Gene ID Reads Annotation
kcnip3a ENSDARG00000034229 63 Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]










Genes with expression patterns similar to kcnip3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. kcnip3a ENSDARG00000034229 63 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
2. SEMA6B SEMA6B 35 3.698 - 1.000 - 0.765 - 1.000 0.933 - -
3. sprn ENSDARG00000056004 128 1.963 - 1.000 - - - 0.963 - - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
4. WNK3 WNK3 36 1.96 - 1.000 - - - - 0.960 - -
5. gdf10a ENSDARG00000095378 12 1.94 - 1.000 - - - 0.940 - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
6. si:ch211-10j20.7 si:ch211-10j20.7 8 1.933 - 1.000 - - - - 0.933 - -
7. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1.933 - 1.000 - - - - 0.933 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
8. nitr3a_1 ENSDARG00000110676 44 1.933 - 1.000 - - - - 0.933 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
9. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1.933 - 1.000 - - - - 0.933 - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
10. BX000430.1 ENSDARG00000112057 135 1.896 - 1.000 - - - 0.896 - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
11. CR847504.1 ENSDARG00000102515 29 1.89 - 1.000 - - - - 0.890 - -
12. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.884 - 1.000 - - - 0.884 - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
13. amigo3 ENSDARG00000074469 39 1.874 - 0.896 - - - 0.978 - - - adhesion molecule with Ig-like domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-449]
14. slc12a5b ENSDARG00000078187 329 1.868 - 1.000 - - - 0.868 - - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
15. si:ch211-263m18.4 ENSDARG00000093353 27 1.822 - 1.000 0.822 - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
16. arsa ENSDARG00000042270 74 1.816 - 1.000 0.816 - - - - - - arylsulfatase A [Source:ZFIN;Acc:ZDB-GENE-050320-118]
17. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 1.807 - 1.000 0.807 - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
18. si:dkey-199m13.9 si:dkey-199m13.9 20 1.793 - - - - - 1.000 0.793 - -
19. zgc:194665 ENSDARG00000004577 136 1.789 - 1.000 - - - 0.789 - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
20. dnm1a ENSDARG00000010042 43 1.785 - 0.883 - - - 0.902 - - - dynamin 1a [Source:ZFIN;Acc:ZDB-GENE-081104-27]
21. calb2a ENSDARG00000041062, ENSDARG00000110220 459 1.783 - 1.000 - - - 0.783 - - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
22. bmp6 ENSDARG00000015686 211 1.778 - - 0.818 - - - 0.960 - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
23. gcnt3 ENSDARG00000060471 37 1.764 - - 0.831 - - - 0.933 - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
24. si:ch73-91k6.8 si:ch73-91k6.8 37 1.762 - 1.000 - - - 0.762 - - -
25. evlb ENSDARG00000099720 245 1.758 - 1.000 - - - 0.758 - - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
26. GALNT16 ENSDARG00000053190 250 1.751 - 0.873 - - - 0.878 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-131120-189]
27. zgc:77112 ENSDARG00000015657 24 1.742 - 1.000 - - - 0.742 - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
28. si:dkeyp-33c10.5 11 1.742 - 1.000 - - - 0.742 - - - si:dkeyp-33c10.5, transcript variant X2
29. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1.742 - 1.000 - - - 0.742 - - -
30. fstl5 ENSDARG00000040198 213 1.719 - 1.000 - - - 0.719 - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
31. galnt13 ENSDARG00000099227 1059 1.71 - 1.000 - - - 0.710 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 [Source:ZFIN;Acc:ZDB-GENE-091204-444]
32. sall3b ENSDARG00000057586 982 1.687 - 0.920 - - - 0.767 - - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
33. cadpsb ENSDARG00000070567 458 1.679 - 0.896 - - - 0.783 - - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
34. cyp2n13 ENSDARG00000042953 10 1.675 - - - - - 0.742 0.933 - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
35. plxnb3 ENSDARG00000032990 98 1.673 - - 0.786 - - 0.887 - - - plexin B3 [Source:ZFIN;Acc:ZDB-GENE-081104-53]
36. si:ch211-243a20.3 ENSDARG00000092240 151 1.671 - 0.896 0.775 - - - - - - si:ch211-243a20.3 [Source:ZFIN;Acc:ZDB-GENE-061207-28]
37. RAB39B RAB39B 482 1.669 - 0.726 - - - 0.943 - - -
38. nell2b ENSDARG00000062797 854 1.666 - 0.950 - - - 0.716 - - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
39. npffr1l3 ENSDARG00000010712 18 1.664 - 0.731 - - - - 0.933 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
40. ARSJ ENSDARG00000077590 684 1.65 - - 0.743 - - - 0.907 - - arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
41. smpd5 ENSDARG00000059811, ENSDARG00000117140 60 1.638 - - - - 0.936 - 0.702 - - sphingomyelin phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-22]
42. ppfia4 ENSDARG00000053205 276 1.631 - - - - - 0.865 0.766 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070720-14]
43. CABZ01111926.1 CABZ01111926.1 249 1.623 - 0.873 0.750 - - - - - -
44. lpar6b ENSDARG00000069441 65 1.62 - 0.819 0.801 - - - - - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
45. tmem178b ENSDARG00000006747 173 1.61 - 0.817 - - - 0.793 - - - transmembrane protein 178B [Source:ZFIN;Acc:ZDB-GENE-040718-92]
46. cd40 ENSDARG00000054968 90 1.593 - - 0.800 - - - 0.793 - - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
47. CABZ01073654.1 CABZ01073654.1 16 1.592 - - - - - 0.742 0.850 - -
48. lbx1a ENSDARG00000018321 634 1.591 - - - - - 0.890 0.701 - - ladybird homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040724-40]
49. thsd7a thsd7a 194 1.589 - 0.751 - - - 0.838 - - -
50. sergef ENSDARG00000070986, ENSDARG00000111782 48 1.582 - - 0.724 - - - 0.858 - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
51. dpysl5b ENSDARG00000059311 600 1.577 - 0.816 - - - 0.761 - - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
52. grnas ENSDARG00000091885 71 1.576 - 0.731 - - - - 0.845 - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
53. scn1bb ENSDARG00000105003 239 1.55 - 0.766 - - - 0.784 - - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
54. chico ENSDARG00000019588 77 1.543 - 0.713 0.830 - - - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
55. CSMD1 CSMD1 15 1.524 - 0.731 - - - - 0.793 - -
56. BAI1_1 BAI1_1 57 1.524 - 0.704 - - - 0.820 - - -
57. zgc:194621 ENSDARG00000074696 85 1.512 - 0.774 - - - - 0.738 - - zgc:194621 [Source:ZFIN;Acc:ZDB-GENE-081022-130]
58. CABZ01029822.1 ENSDARG00000086931 1654 1.512 - 0.796 - - - 0.716 - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
59. BSN BSN 463 1.502 - - - - - 0.725 0.777 - -
60. si:dkeyp-117h8.2 ENSDARG00000011602 260 1.494 - - 0.746 - - 0.748 - - - si:dkeyp-117h8.2 [Source:ZFIN;Acc:ZDB-GENE-041210-321]
61. lrrc4.1 ENSDARG00000069402 323 1.481 - 0.704 - - - 0.777 - - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
62. BAI1 BAI1 173 1.478 - 0.713 - - - 0.765 - - -
63. si:ch211-168h21.3 10 1.473 - 0.731 - - - 0.742 - - - si:ch211-168h21.3
64. npb ENSDARG00000078828 230 1.46 - - - - - 0.723 0.737 - - neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
65. trpa1b ENSDARG00000031875 39 1.455 - 0.713 - - - 0.742 - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
66. si:ch211-76l23.6 si:ch211-76l23.6 68 1.453 - 0.709 - - - - 0.744 - -
67. syngr3b ENSDARG00000025034 290 1.425 - 0.719 - - - 0.706 - - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
68. ZP2_3 ZP2_3 2 1 - 1.000 - - - - - - -
69. star ENSDARG00000006137 149 1 - 1.000 - - - - - - - steroidogenic acute regulatory protein [Source:ZFIN;Acc:ZDB-GENE-001120-3]
70. zgc:171445 ENSDARG00000115205 3 1 - 1.000 - - - - - - - zgc:171445 [Source:ZFIN;Acc:ZDB-GENE-080205-2]
71. si:dkey-56m15.4 si:dkey-56m15.4 39 1 - 1.000 - - - - - - -
72. si:dkey-149m13.3 si:dkey-149m13.3 0 1 - 1.000 - - - - - - -
73. cthrc1b ENSDARG00000001971 44 1 - 1.000 - - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
74. MOV10L1 MOV10L1 21 1 - 1.000 - - - - - - -
75. akt3a_1 ENSDARG00000104810 12 1 - 1.000 - - - - - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
76. si:dkey-191j3.2 ENSDARG00000101997 1 1 - 1.000 - - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
77. EPM2AIP1 EPM2AIP1 4 1 - 1.000 - - - - - - -
78. AC024175.21 AC024175.21 10 1 - 1.000 - - - - - - -
79. arhgef3 ENSDARG00000013834 3 1 - 1.000 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-050208-773]
80. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
81. RECK ENSDARG00000090039 15 1 - 1.000 - - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
82. fam175b fam175b 37 1 - 1.000 - - - - - - -
83. NACC1 NACC1 9 1 - 1.000 - - - - - - -
84. lzts1 ENSDARG00000075565 23 1 - 1.000 - - - - - - - leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
85. cbx7b ENSDARG00000087181 5 1 - 1.000 - - - - - - - chromobox homolog 7b [Source:ZFIN;Acc:ZDB-GENE-110613-2]
86. GAS2_1 GAS2_1 16 1 - 1.000 - - - - - - -
87. nrcam nrcam 397 1 - 1.000 - - - - - - -
88. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 - 1.000 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
89. CABZ01085177.1 ENSDARG00000104644 6 1 - 1.000 - - - - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
90. CR352260.1 CR352260.1 11 1 - 1.000 - - - - - - -
91. BX005305.4 ENSDARG00000114385 6 1 - 1.000 - - - - - - - legumain [Source:NCBI gene;Acc:569153]
92. CABZ01088718.1 CABZ01088718.1 1 1 - 1.000 - - - - - - -
93. SERINC3 SERINC3 21 1 - 1.000 - - - - - - -
94. si:dkey-187i8.2 ENSDARG00000096624 8 1 - 1.000 - - - - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
95. COL19A1 ENSDARG00000076163, ENSDARG00000096073 12 1 - - - - - 1.000 - - - collagen, type XIX, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090312-196]
96. Mar-09 Mar-09 126 1 - 1.000 - - - - - - -
97. zgc:174697 zgc:174697 128 1 - 1.000 - - - - - - -
98. si:ch73-49p17.1 69 1 - 1.000 - - - - - - - si:ch73-49p17.1
99. mctp1b ENSDARG00000060871 20 1 - - - - - - 1.000 - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
100. mir301c 84 1 - 1.000 - - - - - - - microRNA 301c

There are 1303 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA