Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ubr1

Gene Name Gene ID Reads Annotation
ubr1 ENSDARG00000060480 71 ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]










Genes with expression patterns similar to ubr1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ubr1 ENSDARG00000060480 71 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
2. FAM177B 9 1.952 - - - - - 0.952 1.000 - - family with sequence similarity 177 member B
3. fbxo32 ENSDARG00000040277 93 1.952 - - - - - 0.952 1.000 - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
4. GABRR1 ENSDARG00000043902 71 1.916 - - - - - - 0.924 0.992 - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
5. rabggta ENSDARG00000061024 332 1.823 - 0.915 - - - - 0.908 - - Rab geranylgeranyltransferase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060929-1042]
6. lcmt1 ENSDARG00000045140, ENSDARG00000111263 413 1.794 - - - - - 0.905 - 0.889 - leucine carboxyl methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-75]
7. nitr3a_1 ENSDARG00000110676 44 1.739 0.739 - - - - - 1.000 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
8. CU469544.1 CU469544.1 219 1.731 - - - - - - 0.758 0.973 -
9. si:dkey-7a20.9 si:dkey-7a20.9 154 1.728 - - - - - 0.876 0.852 - -
10. PRKRIR PRKRIR 261 1.716 - - - - - - 0.845 0.871 -
11. zp2.5 ENSDARG00000086522 15 1.71 - - - - 0.710 - 1.000 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
12. srd5a2a ENSDARG00000043587 21 1.692 - - - - 0.702 - - 0.990 - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
13. usp8 ENSDARG00000063719 643 1.69 - 0.793 - - - - - 0.897 - ubiquitin specific peptidase 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1949]
14. PPM1J ENSDARG00000074690 109 1.684 0.930 - - - - - 0.754 - - protein phosphatase, Mg2+/Mn2+ dependent, 1J [Source:ZFIN;Acc:ZDB-GENE-091230-9]
15. BX897726.3 BX897726.3 220 1.682 - - - - - 0.727 - 0.955 -
16. spop ENSDARG00000100519 177 1.68 0.721 - - - - - - 0.959 - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
17. CU459160.1 CU459160.1 104 1.679 - 0.775 - - - 0.904 - - -
18. psmd2 ENSDARG00000103190 141 1.679 0.729 - - - - - - 0.950 - proteasome 26S subunit, non-ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1480]
19. rab1bb ENSDARG00000056479, ENSDARG00000109723 551 1.676 - 0.783 - - - - - 0.893 - RAB1B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-040625-133]
20. cables2b ENSDARG00000017154 131 1.673 - 0.872 - - - - 0.801 - - Cdk5 and Abl enzyme substrate 2b [Source:ZFIN;Acc:ZDB-GENE-090313-249]
21. znf526 ENSDARG00000077143 257 1.646 - - - - - 0.778 0.868 - - zinc finger protein 526 [Source:ZFIN;Acc:ZDB-GENE-100922-260]
22. si:ch211-286m4.1 si:ch211-286m4.1 47 1.642 0.914 - - - 0.728 - - - -
23. EPS8 78 1.628 - 0.828 - - - - 0.800 - - epidermal growth factor receptor pathway substrate 8, transcript variant X14
24. PEG3_2 PEG3_2 468 1.601 - - - - - 0.833 0.768 - -
25. qpctla ENSDARG00000061691 869 1.598 - - - - - 0.800 - 0.798 - glutaminyl-peptide cyclotransferase-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1441]
26. als2b ENSDARG00000076924 738 1.587 - 0.874 - - - - - 0.713 - amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
27. zgc:194314 zgc:194314 982 1.557 - - - - - 0.770 0.787 - -
28. gpr98 gpr98 717 1.524 0.768 - - - - - - 0.756 -
29. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 1.518 0.761 - - - - - - 0.757 - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
30. flvcr2b ENSDARG00000031506 170 1.51 - 0.752 - - - - 0.758 - - feline leukemia virus subgroup C cellular receptor family, member 2b [Source:ZFIN;Acc:ZDB-GENE-041210-312]
31. smim15 ENSDARG00000086699, ENSDARG00000114331 1945 1.503 - 0.798 - - - - - 0.705 - small integral membrane protein 15 [Source:ZFIN;Acc:ZDB-GENE-070410-48]
32. THAP6 THAP6 57 1.487 0.768 - - - - - 0.719 - -
33. si:dkey-220a11.10 si:dkey-220a11.10 258 1.486 - 0.741 - - - - 0.745 - -
34. zgc:114037 63 1.469 0.762 0.707 - - - - - - - zgc:114037
35. si:dkey-157l19.2 ENSDARG00000060340 635 1.462 - 0.754 - - - 0.708 - - - si:dkey-157l19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-190]
36. zgc:194398 ENSDARG00000078250 815 1.453 - 0.714 - - - 0.739 - - - zgc:194398 [Source:ZFIN;Acc:ZDB-GENE-081022-111]
37. C9H2orf40 C9H2orf40 212 1.441 0.711 0.730 - - - - - - -
38. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - - 1.000 - -
39. BX901974.1 ENSDARG00000067592 2 1 - - - - - - 1.000 - -
40. CU855711.1 ENSDARG00000088643 6 1 - - - - - - 1.000 - - legumain-like [Source:NCBI gene;Acc:108191752]
41. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - 1.000 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
42. pex10 ENSDARG00000041511 52 1 1.000 - - - - - - - - peroxisomal biogenesis factor 10 [Source:ZFIN;Acc:ZDB-GENE-041010-71]
43. BX469910.2 ENSDARG00000096127 6 1 1.000 - - - - - - - -
44. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 1 - - - - - - 1.000 - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
45. BX537305.1 ENSDARG00000113834 10 1 - - - - - - 1.000 - -
46. BTBD17_1 BTBD17_1 42 1 1.000 - - - - - - - -
47. mtus2 mtus2 22 1 - - - - - - 1.000 - -
48. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
49. si:dkey-41e15.4 si:dkey-41e15.4 1 1 - - - - - - 1.000 - -
50. CLNK 8 1 - - - - - - 1.000 - - cytokine dependent hematopoietic cell linker
51. nr6a1a ENSDARG00000096224, ENSDARG00000101508 24 1 - - - - - - 1.000 - - nuclear receptor subfamily 6, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-991207-19]
52. MMP20 MMP20 1 1 - - - - - - 1.000 - -
53. FRMD7 ENSDARG00000068958 17 1 - - - - - - 1.000 - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
54. st6galnac ENSDARG00000086292 29 1 - - - - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
55. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - - 1.000 - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
56. snapc1a ENSDARG00000029569 25 1 1.000 - - - - - - - - small nuclear RNA activating complex, polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1031]
57. CABZ01002626.1 CABZ01002626.1 29 1 - - - - - - 1.000 - -
58. tceanc2 ENSDARG00000062919 32 1 1.000 - - - - - - - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
59. SNORA63 SNORA63 7 1 1.000 - - - - - - - -
60. si:dkey-58f10.11 ENSDARG00000094935 1 1 - - - - - - 1.000 - - si:dkey-58f10.11 [Source:ZFIN;Acc:ZDB-GENE-060526-313]
61. chrm2a ENSDARG00000098612 5 1 1.000 - - - - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
62. si:dkey-28k24.2 ENSDARG00000095106, ENSDARG00000104787, ENSDARG00000110878, ENSDARG00000116574 1 1 - - - - - - 1.000 - - si:dkey-28k24.2 [Source:ZFIN;Acc:ZDB-GENE-121213-4]
63. mmrn2a ENSDARG00000076135 37 1 - - - - - - 1.000 - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
64. SLC2A13 SLC2A13 74 1 1.000 - - - - - - - -
65. pygl ENSDARG00000002197 192 1 1.000 - - - - - - - - phosphorylase, glycogen, liver [Source:ZFIN;Acc:ZDB-GENE-041205-1]
66. gabrr2b ENSDARG00000014057 9 1 - - - - - - 1.000 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
67. SIKE1 2 1 - - - - - - 1.000 - - suppressor of IKBKE 1, transcript variant X3
68. CECR6 25 1 - - - - - - 1.000 - - cat eye syndrome chromosome region, candidate 6
69. si:ch211-283l16.1 ENSDARG00000112586 131 1 - - - - - - 1.000 - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
70. zgc:165409_1 ENSDARG00000091385 65 1 1.000 - - - - - - - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
71. pdcl ENSDARG00000009480 12 1 1.000 - - - - - - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
72. PLEKHS1_2 PLEKHS1_2 21 1 - - - - - - 1.000 - -
73. dctn1a ENSDARG00000019743 45 1 - - - - - - 1.000 - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
74. lyve1a ENSDARG00000075833 25 1 1.000 - - - - - - - - lymphatic vessel endothelial hyaluronic receptor 1a [Source:ZFIN;Acc:ZDB-GENE-031118-138]
75. sh2d1aa ENSDARG00000095348 4 1 - - - - - - 1.000 - - SH2 domain containing 1A duplicate a [Source:ZFIN;Acc:ZDB-GENE-060526-212]
76. TMEM138 ENSDARG00000090543 105 1 - - - - - - 1.000 - - transmembrane protein 138 [Source:ZFIN;Acc:ZDB-GENE-120912-1]
77. si:ch211-122l24.5 si:ch211-122l24.5 1 1 - - - - - - 1.000 - -
78. CR762480.2 ENSDARG00000102728 1 1 - - - - - - 1.000 - -
79. spata20 ENSDARG00000013880 46 1 1.000 - - - - - - - - spermatogenesis associated 20 [Source:ZFIN;Acc:ZDB-GENE-030131-7269]
80. si:ch211-239f4.6 ENSDARG00000093347 2 1 - - - - - - 1.000 - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
81. DNER ENSDARG00000061031 123 1 1.000 - - - - - - - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
82. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1 - - - - - - 1.000 - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
83. SPDEF ENSDARG00000029930 60 1 - - - - - - 1.000 - - SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
84. slc5a1 ENSDARG00000013871 4 1 - - - - - - 1.000 - - solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1524]
85. CU929052.1 CU929052.1 642 1 - - - - - - 1.000 - -
86. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 1 - - - - - - 1.000 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
87. GABRA3 ENSDARG00000090883 5 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
88. satb2 ENSDARG00000061885 6 1 - - - - - - 1.000 - - SATB homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070912-212]
89. CABZ01069020.1 ENSDARG00000105806 19 1 1.000 - - - - - - - - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
90. KCNIP4 ENSDARG00000088100 86 1 1.000 - - - - - - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
91. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 1 - - - - - - 1.000 - - lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
92. CT583709.2 CT583709.2 55 1 1.000 - - - - - - - -
93. zgc:174710 13 1 1.000 - - - - - - - - zgc:174710
94. CYP27A1_2 CYP27A1_2 5 1 - - - - - - 1.000 - -
95. zgc:152977 ENSDARG00000077178 59 1 - - - - - - 1.000 - - zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]
96. CU633857.1 ENSDARG00000115315 21 1 - - - - - - 1.000 - - multiciliate differentiation and DNA synthesis associated cell cycle protein [Source:NCBI gene;Acc:100537904]
97. bcat1 ENSDARG00000045568 39 1 1.000 - - - - - - - - branched chain amino-acid transaminase 1, cytosolic [Source:ZFIN;Acc:ZDB-GENE-030131-9358]
98. tbx5b ENSDARG00000092060 37 1 - - - - - - 1.000 - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
99. g6pcb ENSDARG00000014967 8 1 - - - - - - 1.000 - - glucose-6-phosphatase b, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081223-2]
100. CABZ01034857.1 CABZ01034857.1 1 1 - - - - - - 1.000 - -

There are 1182 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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