Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim35-23

Gene Name Gene ID Reads Annotation
trim35-23 ENSDARG00000102368, ENSDARG00000113611 1 tripartite motif containing 35-23 [Source:ZFIN;Acc:ZDB-GENE-060503-295]










Genes with expression patterns similar to trim35-23

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim35-23 ENSDARG00000102368, ENSDARG00000113611 1 2 - - 1.000 - - - - - 1.000 tripartite motif containing 35-23 [Source:ZFIN;Acc:ZDB-GENE-060503-295]
2. hs3st4 ENSDARG00000052648 6 2 - - 1.000 - - - - - 1.000 heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-070202-8]
3. nkx2.7 ENSDARG00000021232 38 1.533 - - 0.801 - - - - - 0.732 NK2 transcription factor related 7 [Source:ZFIN;Acc:ZDB-GENE-990415-179]
4. si:dkey-33k1.2 si:dkey-33k1.2 1 1 - - - - - - - - 1.000
5. si:dkey-65b12.13 si:dkey-65b12.13 7 1 - - 1.000 - - - - - -
6. CR318629.1 CR318629.1 7 1 - - 1.000 - - - - - -
7. ZNF768 ZNF768 1 1 - - 1.000 - - - - - -
8. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - 1.000 - - - - - -
9. si:dkey-161j23.5 ENSDARG00000094441 11 1 - - 1.000 - - - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
10. si:ch211-22d5.2 ENSDARG00000079031 3 1 - - - - - - - - 1.000 si:ch211-22d5.2 [Source:ZFIN;Acc:ZDB-GENE-091204-283]
11. si:ch211-234c11.1 si:ch211-234c11.1 3 1 - - 1.000 - - - - - -
12. si:ch211-14a17.6 ENSDARG00000054313, ENSDARG00000116347 12 1 - - 1.000 - - - - - - si:ch211-14a17.6 [Source:ZFIN;Acc:ZDB-GENE-030616-589]
13. pdcb ENSDARG00000017634 10 1 - - 1.000 - - - - - - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
14. si:ch211-128b10.4 si:ch211-128b10.4 3 1 - - - - - - - - 1.000
15. trpm2 ENSDARG00000095696, ENSDARG00000101641 1 1 - - 1.000 - - - - - - transient receptor potential cation channel, subfamily M, member 2 [Source:ZFIN;Acc:ZDB-GENE-061214-4]
16. UNC5CL UNC5CL 4 1 - - 1.000 - - - - - -
17. mrap2a ENSDARG00000074763 0 1 - - 1.000 - - - - - - melanocortin 2 receptor accessory protein 2a [Source:ZFIN;Acc:ZDB-GENE-100729-3]
18. PEG3_33 PEG3_33 0 1 - - 1.000 - - - - - -
19. tcp10 tcp10 1 1 - - - - - - - - 1.000
20. si:ch73-95a24.1 si:ch73-95a24.1 11 1 - - - - - - - - 1.000
21. si:ch211-284e13.11 ENSDARG00000091997 3 1 - - 1.000 - - - - - - si:ch211-284e13.11 [Source:ZFIN;Acc:ZDB-GENE-060526-157]
22. gcdhl gcdhl 38 1 - - 1.000 - - - - - -
23. OGFR ENSDARG00000037837 4 1 - - 1.000 - - - - - - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
24. trpm5 ENSDARG00000059792 3 1 - - 1.000 - - - - - - transient receptor potential cation channel, subfamily M, member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-736]
25. BX323882.1 ENSDARG00000101656 2 1 - - 1.000 - - - - - - butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
26. slc5a9 ENSDARG00000005518 16 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
27. BX323557.2 BX323557.2 1 1 - - - - - - - - 1.000
28. si:dkey-187i8.2 ENSDARG00000096624 8 1 - - 1.000 - - - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
29. CA4 CA4 1 1 - - 1.000 - - - - - -
30. si:dkey-246e3.4 ENSDARG00000086390 50 1 - - 1.000 - - - - - - si:dkey-246e3.4 [Source:ZFIN;Acc:ZDB-GENE-130531-58]
31. CU694952.2 CU694952.2 3 1 - - 1.000 - - - - - -
32. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1 - - 1.000 - - - - - -
33. si:ch211-113a14.29_2 0 1 - - 1.000 - - - - - - si:ch211-113a14.29
34. si:dkeyp-25a3.1 si:dkeyp-25a3.1 4 1 - - - - - - - - 1.000
35. ZBED1 ZBED1 2 1 - - 1.000 - - - - - -
36. fbxo36b ENSDARG00000039152 7 1 - - 1.000 - - - - - - F-box protein 36b [Source:ZFIN;Acc:ZDB-GENE-060825-271]
37. ST3GAL1 ENSDARG00000079654 2 1 - - - - - - - - 1.000 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
38. rtn4rl2a ENSDARG00000052012 5 1 - - 1.000 - - - - - - reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
39. si:ch211-117l17.4 ENSDARG00000103534 24 1 - - - - - - - - 1.000 si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
40. CABZ01058371.1 CABZ01058371.1 23 1 - - 1.000 - - - - - -
41. plcb4 1 1 - - 1.000 - - - - - - phospholipase C, beta 4
42. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1 - - 1.000 - - - - - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
43. ENSDARG00000063362 ENSDARG00000063362 0 1 - - 1.000 - - - - - -
44. N4BP3 ENSDARG00000060007 0 1 - - 1.000 - - - - - - NEDD4 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-141216-2]
45. si:ch211-199i18.8 si:ch211-199i18.8 4 1 - - - - - - - - 1.000
46. DGKA DGKA 8 1 - - - - - - - - 1.000
47. cyp7a1a cyp7a1a 1 1 - - 1.000 - - - - - -
48. tdrd9 ENSDARG00000013453 22 1 - - 1.000 - - - - - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
49. ZNF135_1 ZNF135_1 1 1 - - 1.000 - - - - - -
50. CABZ01057951.1 CABZ01057951.1 10 1 - - - - - - - - 1.000
51. efna5b ENSDARG00000098625 1 1 - - 1.000 - - - - - - ephrin-A5b [Source:ZFIN;Acc:ZDB-GENE-980526-186]
52. BX537350.1 BX537350.1 8 1 - - - - - - - - 1.000
53. si:dkey-3p4.4 si:dkey-3p4.4 2 1 - - - - - - - - 1.000
54. radil ENSDARG00000079779 14 1 - - - - - - - - 1.000 Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
55. celsr3 ENSDARG00000055825 1 1 - - 1.000 - - - - - - cadherin, EGF LAG seven-pass G-type receptor 3 [Source:ZFIN;Acc:ZDB-GENE-070122-3]
56. desmb ENSDARG00000005221, ENSDARG00000110245 3 1 - - - - - - - - 1.000 desmin b [Source:ZFIN;Acc:ZDB-GENE-061027-102]
57. si:ch211-163f10.4 si:ch211-163f10.4 1 1 - - - - - - - - 1.000
58. CABZ01032454.1 CABZ01032454.1 7 1 - - 1.000 - - - - - -
59. wbp4 ENSDARG00000068082 1 1 - - - - - - - - 1.000 WW domain binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-342]
60. ENSDARG00000088389 ENSDARG00000088389 2 1 - - 1.000 - - - - - -
61. si:ch211-119o8.6 ENSDARG00000026972, ENSDARG00000115846 13 1 - - 1.000 - - - - - - si:ch211-119o8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-17]
62. tmem86a ENSDARG00000044034 1 1 - - 1.000 - - - - - - transmembrane protein 86A [Source:ZFIN;Acc:ZDB-GENE-050320-81]
63. si:ch211-191n13.1 si:ch211-191n13.1 1 1 - - - - - - - - 1.000
64. si:ch211-245n8.2 si:ch211-245n8.2 0 1 - - 1.000 - - - - - -
65. ednrb1b ednrb1b 0 1 - - 1.000 - - - - - -
66. si:dkey-52l1.1 si:dkey-52l1.1 1 1 - - 1.000 - - - - - -
67. glsa ENSDARG00000062812 1 1 - - - - - - - - 1.000 glutaminase a [Source:ZFIN;Acc:ZDB-GENE-050204-3]
68. si:dkey-14a7.6 si:dkey-14a7.6 0 1 - - 1.000 - - - - - -
69. socs7_1 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 1 1 - - - - - - - - 1.000 suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
70. dnah7l dnah7l 2 1 - - 1.000 - - - - - -
71. si:rp71-36n21.1 93 1 - - 1.000 - - - - - - si:rp71-36n21.1
72. HTRA2_7 HTRA2_7 1 1 - - 1.000 - - - - - -
73. GMEB2 ENSDARG00000093240 6 1 - - 1.000 - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
74. si:ch211-207c6.14 si:ch211-207c6.14 19 1 - - - - - - - - 1.000
75. si:ch211-187f22.2 si:ch211-187f22.2 7 1 - - 1.000 - - - - - -
76. tecrl2 tecrl2 11 1 - - 1.000 - - - - - -
77. CR854907.1 ENSDARG00000097386 1 1 - - - - - - - - 1.000
78. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 - - 1.000 - - - - - -
79. si:dkeyp-8f4.7 si:dkeyp-8f4.7 1 1 - - 1.000 - - - - - -
80. si:dkeyp-27e10.6 si:dkeyp-27e10.6 36 1 - - 1.000 - - - - - -
81. si:dkey-111e8.4 ENSDARG00000093547, ENSDARG00000115133 1 1 - - 1.000 - - - - - - si:dkey-111e8.4 [Source:ZFIN;Acc:ZDB-GENE-060526-191]
82. CST7 CST7 22 1 - - - - - - - - 1.000
83. ZNF70_10 ZNF70_10 0 1 - - 1.000 - - - - - -
84. gabrr2b ENSDARG00000014057 9 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
85. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1 - - 1.000 - - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
86. POLR2E POLR2E 1 1 - - - - - - - - 1.000
87. grm1a ENSDARG00000026796 9 1 - - 1.000 - - - - - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
88. si:dkey-85k7.12 ENSDARG00000078731 3 1 - - 1.000 - - - - - - si:dkey-85k7.12 [Source:ZFIN;Acc:ZDB-GENE-130530-855]
89. kl ENSDARG00000079862 13 1 - - 1.000 - - - - - - klotho [Source:ZFIN;Acc:ZDB-GENE-110221-1]
90. CR848788.1 ENSDARG00000103037 1 1 - - - - - - - - 1.000
91. cd74b ENSDARG00000036628 8 1 - - - - - - - - 1.000 CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
92. si:ch73-289h5.1 si:ch73-289h5.1 2 1 - - 1.000 - - - - - -
93. CACNA1F CACNA1F 2 1 - - 1.000 - - - - - -
94. RBBP6_11 RBBP6_11 6 1 - - 1.000 - - - - - -
95. tectb ENSDARG00000045268 3 1 - - 1.000 - - - - - - tectorin beta [Source:ZFIN;Acc:ZDB-GENE-041212-16]
96. zgc:194418 ENSDARG00000111790 1 1 - - - - - - - - 1.000 zgc:194418 [Source:ZFIN;Acc:ZDB-GENE-080723-5]
97. si:ch211-281k19.2 ENSDARG00000098133 1 1 - - - - - - - - 1.000 si:ch211-281k19.2 [Source:ZFIN;Acc:ZDB-GENE-090311-35]
98. cda 3 1 - - - - - - - - 1.000 cytidine deaminase
99. 5S_rRNA_10 5S_rRNA_10 2 1 - - - - - - - - 1.000
100. si:ch211-180p9.2 si:ch211-180p9.2 1 1 - - - - - - - - 1.000

There are 138 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA