Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim109

Gene Name Gene ID Reads Annotation
trim109 ENSDARG00000062429 321 tripartite motif containing 109 [Source:ZFIN;Acc:ZDB-GENE-060616-101]










Genes with expression patterns similar to trim109

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim109 ENSDARG00000062429 321 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 109 [Source:ZFIN;Acc:ZDB-GENE-060616-101]
2. synpo2lb ENSDARG00000078696 2361 2.355 0.765 - - - - 0.712 0.878 - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
3. flncb ENSDARG00000018820 5595 2.315 0.755 - - - - 0.701 0.859 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
4. COL22A1 COL22A1 4473 2.278 0.730 0.721 - - - - 0.827 - -
5. ablim2 ENSDARG00000055223 1934 2.265 0.733 0.788 - - - - 0.744 - - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
6. tamm41 ENSDARG00000100157 1116 2.214 0.733 - - 0.752 - - 0.729 - - TAM41 mitochondrial translocator assembly and maintenance homolog [Source:ZFIN;Acc:ZDB-GENE-051030-99]
7. ptch2 ENSDARG00000055026 980 1.751 - - - 0.837 - - 0.914 - - patched 2 [Source:ZFIN;Acc:ZDB-GENE-980526-44]
8. maml3 ENSDARG00000079552 357 1.734 - 0.867 - 0.867 - - - - - mastermind-like transcriptional coactivator 3 [Source:ZFIN;Acc:ZDB-GENE-090313-292]
9. myf6 ENSDARG00000029830 1911 1.712 0.897 - - - - - 0.815 - - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
10. si:ch211-151o1.2 si:ch211-151o1.2 3580 1.692 0.855 - - - - - 0.837 - -
11. ache ENSDARG00000031796 1985 1.687 - - - - - 0.769 0.918 - - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
12. npr3 ENSDARG00000035253, ENSDARG00000109797, ENSDARG00000110534 857 1.686 - - - 0.882 - - 0.804 - - natriuretic peptide receptor 3 [Source:ZFIN;Acc:ZDB-GENE-060531-91]
13. ckmt2 ckmt2 768 1.666 - - - 0.841 - - 0.825 - -
14. UBAP2 UBAP2 3818 1.654 - - - 0.803 - - 0.851 - -
15. rgs17 ENSDARG00000039435 590 1.627 - - - - - 0.782 0.845 - - regulator of G protein signaling 17 [Source:ZFIN;Acc:ZDB-GENE-040718-229]
16. klhl40a ENSDARG00000039052 2537 1.617 0.797 - - - - - 0.820 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
17. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.617 0.743 - - - - - 0.874 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
18. TRIM63 TRIM63 1600 1.604 0.755 - - - - - 0.849 - -
19. PRIMA1 PRIMA1 459 1.604 - - - 0.863 - - 0.741 - -
20. znf106a ENSDARG00000016651 6049 1.597 0.733 - - - - - 0.864 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
21. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.595 0.759 - - - - - 0.836 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
22. murcb murcb 13655 1.591 0.704 - - - - - 0.887 - -
23. adss ENSDARG00000002071 5497 1.589 0.707 - - - - - 0.882 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
24. BX324201.1 BX324201.1 3302 1.587 0.726 - - - - - 0.861 - -
25. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 1.585 0.795 - - - - - 0.790 - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
26. zgc:92518 ENSDARG00000016343 3837 1.585 0.726 - - - - - 0.859 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
27. si:ch211-152c2.3 ENSDARG00000045898 3448 1.584 0.713 - - - - - 0.871 - - si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
28. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 1.582 0.742 - - - - - 0.840 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
29. six1b ENSDARG00000026473 1908 1.581 0.732 - - - - - 0.849 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
30. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.58 0.711 - - - - - 0.869 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
31. fermt2 ENSDARG00000020242 9351 1.576 0.784 - - - - - 0.792 - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
32. fxr1 ENSDARG00000022968 2831 1.574 - - - - - 0.765 0.809 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
33. CABZ01074435.1 CABZ01074435.1 4551 1.574 0.735 - - - - - 0.839 - -
34. pygma ENSDARG00000055518 15972 1.57 0.745 - - - - - 0.825 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
35. ZNF609 ZNF609 2176 1.561 - 0.757 - - - - 0.804 - -
36. BX294434.1 ENSDARG00000061272 6493 1.561 0.754 - - - - - 0.807 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
37. kcnma1a ENSDARG00000079840 2584 1.56 - - - - - 0.743 0.817 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
38. MYOM1 MYOM1 3870 1.559 0.759 - - - - - 0.800 - -
39. aqp1a.1 ENSDARG00000023713 3237 1.55 - 0.809 - - - - 0.741 - - aquaporin 1a (Colton blood group), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7764]
40. CCK CCK 1826 1.548 0.713 - - - - - 0.835 - -
41. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.547 0.745 - - - - - 0.802 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
42. tgm2a ENSDARG00000070157 4516 1.547 0.713 - - - - - 0.834 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
43. rps6kal ENSDARG00000037574, ENSDARG00000115099 294 1.546 - 0.768 - - - - 0.778 - - ribosomal protein S6 kinase a, like [Source:ZFIN;Acc:ZDB-GENE-030131-9616]
44. rtn2a ENSDARG00000016088 12184 1.546 0.709 - - - - - 0.837 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
45. cap2 ENSDARG00000104478 3266 1.54 0.712 - - - - - 0.828 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
46. tnnt2e ENSDARG00000045822, ENSDARG00000109924 3288 1.539 - - - 0.735 - - 0.804 - - troponin T2e, cardiac [Source:ZFIN;Acc:ZDB-GENE-041210-27]
47. tmsb ENSDARG00000054911 6411 1.537 0.769 - - - - - 0.768 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
48. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.535 0.706 - - - - - 0.829 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
49. C11H6orf120 C11H6orf120 824 1.533 - - - 0.810 - 0.723 - - -
50. hspg2 ENSDARG00000076564 3440 1.533 - 0.709 - - - - 0.824 - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
51. CU638714.1 ENSDARG00000100303 2132 1.531 0.764 - - - - - 0.767 - -
52. pbxip1a ENSDARG00000071015 4960 1.531 0.708 - - - - - 0.823 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
53. trdn ENSDARG00000041779 4283 1.531 0.715 - - - - - 0.816 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
54. TENC1 TENC1 1729 1.53 0.769 - - - - - 0.761 - -
55. FHOD3_1 FHOD3_1 983 1.53 0.703 - - - - - 0.827 - -
56. chrna1 ENSDARG00000009021 2931 1.519 0.736 - - - - - 0.783 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
57. RECQL4 ENSDARG00000077516 462 1.519 - 0.765 - - - - 0.754 - - RecQ helicase-like 4 [Source:ZFIN;Acc:ZDB-GENE-091112-2]
58. cetn2 ENSDARG00000101510 541 1.518 - 0.772 - 0.746 - - - - - centrin, EF-hand protein, 2 [Source:ZFIN;Acc:ZDB-GENE-091118-94]
59. trim55a ENSDARG00000029596 2858 1.516 0.712 - - - - - 0.804 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
60. srpk3 ENSDARG00000005916 1546 1.511 0.709 - - - - - 0.802 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
61. cmya5 ENSDARG00000061379 1423 1.506 0.745 - - - - - 0.761 - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
62. nid1a ENSDARG00000068710 3948 1.506 0.728 - - - - - 0.778 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
63. naa15a ENSDARG00000003213 5889 1.5 - - - - - 0.733 0.767 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
64. cfl2 ENSDARG00000014106 8051 1.498 0.709 - - - - - 0.789 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
65. slc16a3 ENSDARG00000045051 818 1.494 - 0.749 - - - - 0.745 - - solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
66. hspb6 ENSDARG00000077236 209 1.487 - 0.723 - - - - 0.764 - - heat shock protein, alpha-crystallin-related, b6 [Source:ZFIN;Acc:ZDB-GENE-080214-7]
67. myoz2a ENSDARG00000012311 1373 1.484 0.711 - - - - - 0.773 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
68. dyrk2 ENSDARG00000094646 2163 1.477 0.761 - - - - - 0.716 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
69. limch1a ENSDARG00000074275 2981 1.472 0.704 - - - - - 0.768 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
70. chrnd ENSDARG00000019342 2728 1.47 0.715 - - - - - 0.755 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
71. TIMM22 ENSDARG00000091413 957 1.468 - 0.732 - - - 0.736 - - - translocase of inner mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:17317]
72. wu:fb17g07 wu:fb17g07 10567 1.465 0.726 0.739 - - - - - - -
73. mdh2 ENSDARG00000043371 14485 1.463 0.711 - - - - - 0.752 - - malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
74. ITGB1BP2 ENSDARG00000030176 2472 1.458 0.710 - - - - - 0.748 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
75. ank2b ENSDARG00000043313 3065 1.452 - - - - - 0.707 0.745 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
76. atp2a1 ENSDARG00000020574 291561 1.448 0.722 - - - - - 0.726 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
77. BX649554.3 BX649554.3 949 1.443 0.733 - - - - - 0.710 - -
78. FSD2 518 1.427 - - - 0.722 - - 0.705 - - fibronectin type III and SPRY domain containing 2
79. CBFA2T3 ENSDARG00000079012 6799 1.419 - - - - - 0.718 0.701 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
80. mpp6b ENSDARG00000029761 2142 1.417 0.709 - - - - - 0.708 - - membrane protein, palmitoylated 6b (MAGUK p55 subfamily member 6) [Source:ZFIN;Acc:ZDB-GENE-040426-775]
81. rassf8b ENSDARG00000045485 1568 1.416 0.706 0.710 - - - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1338]
82. tufm ENSDARG00000104173 9292 1.414 0.708 - - - - - 0.706 - - Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
83. ANK1_1 ANK1_1 507 1.407 0.704 - - - - 0.703 - - -
84. zgc:153733 ENSDARG00000110325, ENSDARG00000111744, ENSDARG00000114452 176 0.979 - - - 0.979 - - - - - zgc:153733 [Source:ZFIN;Acc:ZDB-GENE-060825-273]
85. josd2 ENSDARG00000057626, ENSDARG00000111978 273 0.975 - - - 0.975 - - - - - Josephin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-850]
86. zgc:154054 ENSDARG00000099923 19 0.975 - - - 0.975 - - - - - zgc:154054 [Source:ZFIN;Acc:ZDB-GENE-061103-283]
87. zgc:110353 ENSDARG00000039443 80 0.973 - - - 0.973 - - - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
88. GMIP ENSDARG00000077249 43 0.973 - - - 0.973 - - - - - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
89. zgc:173652 22 0.973 - - - 0.973 - - - - - zgc:173652
90. PLEKHG3 72 0.972 - - - 0.972 - - - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
91. cyp2x6 ENSDARG00000079653, ENSDARG00000111425 33 0.972 - - - 0.972 - - - - - cytochrome P450, family 2, subfamily X, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-050320-144]
92. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 0.971 - - - 0.971 - - - - - general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
93. klhl36 ENSDARG00000030251, ENSDARG00000113095 32 0.971 - - - 0.971 - - - - - kelch-like family member 36 [Source:ZFIN;Acc:ZDB-GENE-050522-324]
94. zgc:172075 ENSDARG00000076146 93 0.969 - - - 0.969 - - - - - zgc:172075 [Source:ZFIN;Acc:ZDB-GENE-080215-3]
95. arhgap22 ENSDARG00000021255 117 0.968 - - - 0.968 - - - - - Rho GTPase activating protein 22 [Source:ZFIN;Acc:ZDB-GENE-090313-87]
96. nlgn3b ENSDARG00000062376 171 0.967 - - - 0.967 - - - - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
97. HAP1 HAP1 481 0.966 - - - 0.966 - - - - -
98. haao ENSDARG00000076487 143 0.966 - - - 0.966 - - - - - 3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89]
99. GPR4 ENSDARG00000079479 92 0.964 - - - 0.964 - - - - - G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-101202-1]
100. PHLDB2_1 PHLDB2_1 316 0.96 - - - 0.960 - - - - -

There are 963 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA