Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gtf3ab

Gene Name Gene ID Reads Annotation
gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]










Genes with expression patterns similar to gtf3ab

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
2. guca1c ENSDARG00000030758 9 1.922 1.000 - - - - - 0.922 - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
3. dusp12 ENSDARG00000076330 173 1.85 - - - 0.945 - 0.905 - - - dual specificity phosphatase 12 [Source:ZFIN;Acc:ZDB-GENE-050626-91]
4. zgc:172075 ENSDARG00000076146 93 1.846 - - - 0.990 - - 0.856 - - zgc:172075 [Source:ZFIN;Acc:ZDB-GENE-080215-3]
5. FNIP2 FNIP2 593 1.832 - - - 0.972 - 0.860 - - -
6. zgc:153733 ENSDARG00000110325, ENSDARG00000111744, ENSDARG00000114452 176 1.823 - - - 0.979 - - 0.844 - - zgc:153733 [Source:ZFIN;Acc:ZDB-GENE-060825-273]
7. si:ch211-219f7.3 si:ch211-219f7.3 48 1.814 0.895 - - - - - 0.919 - -
8. si:dkey-233h12.4 si:dkey-233h12.4 2 1.81 1.000 - - - - - - - 0.810
9. si:ch211-113p18.3 ENSDARG00000087835 377 1.798 - - - - - 0.946 0.852 - - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
10. ncbp2 ENSDARG00000014898 232 1.796 - - - 0.922 - - 0.874 - - nuclear cap binding protein subunit 2 [Source:ZFIN;Acc:ZDB-GENE-020419-31]
11. tmem110 497 1.791 - - - - - 0.938 0.853 - - transmembrane protein 110
12. CABZ01044023.1 ENSDARG00000117734 240 1.784 - - - - - 0.896 0.888 - -
13. zgc:171779 ENSDARG00000016908 26 1.783 - - 0.807 - - 0.976 - - - zgc:171779 [Source:ZFIN;Acc:ZDB-GENE-071004-38]
14. bty bty 752 1.77 - - - - - 1.000 0.770 - -
15. GTF3A GTF3A 6 1.769 1.000 - - - - - - 0.769 -
16. hsd3b1 ENSDARG00000069926 35 1.763 1.000 - - - - - - 0.763 - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-30]
17. itga4 ENSDARG00000103056 223 1.761 - - - 0.906 - 0.855 - - - integrin alpha 4 [Source:ZFIN;Acc:ZDB-GENE-110411-108]
18. CIT_1 CIT_1 6 1.751 1.000 - - - - - - - 0.751
19. si:ch211-200p22.4 ENSDARG00000029170, ENSDARG00000110266 175 1.737 - - - 0.960 - 0.777 - - - si:ch211-200p22.4 [Source:ZFIN;Acc:ZDB-GENE-081104-61]
20. CABZ01024770.1 CABZ01024770.1 150 1.723 - - - - - 0.894 0.829 - -
21. CU928217.1 CU928217.1 12 1.718 1.000 - - - - - - 0.718 -
22. esrrga ENSDARG00000004861 805 1.712 - - - 0.826 - - 0.886 - - estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
23. mnat1 ENSDARG00000002077 287 1.711 0.830 - - - - - 0.881 - - MNAT CDK-activating kinase assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-041010-203]
24. si:ch211-87m7.2 ENSDARG00000030129 223 1.705 - - - - - 0.858 0.847 - - si:ch211-87m7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-153]
25. mtfr2 ENSDARG00000060394 482 1.698 - - - 0.814 - - 0.884 - - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
26. si:ch211-259i2.2 si:ch211-259i2.2 45 1.69 - - - - - 0.790 0.900 - -
27. 5S_rRNA_18 5S_rRNA_18 270 1.675 - - - 0.971 - - 0.704 - -
28. si:ch211-130m23.2 ENSDARG00000095136 121 1.67 - - - - - 0.817 0.853 - - si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
29. impad1 ENSDARG00000058114 667 1.659 - - - 0.767 - 0.892 - - - inositol monophosphatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-051127-23]
30. U3 U3 287 1.65 - - - - - 0.742 0.908 - -
31. si:dkey-8k3.2 ENSDARG00000038424 285 1.65 - - - - - 0.949 0.701 - - si:dkey-8k3.2 [Source:ZFIN;Acc:ZDB-GENE-100922-98]
32. efcab4a efcab4a 110 1.647 - - - - - 0.754 0.893 - -
33. agtr2 ENSDARG00000035552 286 1.639 0.874 - - 0.765 - - - - - angiotensin II receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050306-56]
34. fam5b fam5b 45 1.637 - - 0.735 - - - 0.902 - -
35. rbm5 ENSDARG00000098280 396 1.629 - - - 0.706 - - 0.923 - - RNA binding motif protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-3022]
36. phyh ENSDARG00000086740 88 1.622 0.720 - - - - 0.902 - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
37. fam193b ENSDARG00000102831 442 1.621 0.702 - - - - - 0.919 - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
38. si:ch73-91k6.2 ENSDARG00000091598 727 1.618 - - - - - 0.721 0.897 - - si:ch73-91k6.2 [Source:ZFIN;Acc:ZDB-GENE-050208-270]
39. zgc:175214 ENSDARG00000022891 1013 1.617 - - - 0.848 - - 0.769 - - zgc:175214 [Source:ZFIN;Acc:ZDB-GENE-080303-32]
40. ZNF337_16 ZNF337_16 22 1.613 0.865 - - - - - - - 0.748
41. AIFM2 ENSDARG00000077549 1419 1.61 - - - 0.749 - - 0.861 - - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
42. dhrs11a ENSDARG00000046090, ENSDARG00000112531 411 1.608 - - - 0.813 - 0.795 - - - dehydrogenase/reductase (SDR family) member 11a [Source:ZFIN;Acc:ZDB-GENE-060929-324]
43. tfec ENSDARG00000098745 1399 1.583 0.781 - - - - - 0.802 - - transcription factor EC [Source:ZFIN;Acc:ZDB-GENE-041210-21]
44. ssh2b ENSDARG00000098955 614 1.575 - - - 0.782 - - 0.793 - - slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
45. LGALS3BP LGALS3BP 51 1.569 - - - - - 0.711 0.858 - -
46. acy3.1 ENSDARG00000093003 54 1.561 - - 0.764 - - 0.797 - - - aspartoacylase (aminocyclase) 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040718-345]
47. chsy1 ENSDARG00000079027 455 1.557 - - - 0.704 - - 0.853 - - chondroitin sulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3127]
48. rfc5 ENSDARG00000035634 974 1.551 - - - - - 0.764 0.787 - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
49. pdxkb ENSDARG00000036546 721 1.539 - - - - - 0.810 0.729 - - pyridoxal (pyridoxine, vitamin B6) kinase b [Source:ZFIN;Acc:ZDB-GENE-030616-521]
50. COX19 ENSDARG00000063882 419 1.536 - - - 0.830 - - 0.706 - - cytochrome c oxidase assembly factor COX19 [Source:ZFIN;Acc:ZDB-GENE-070410-29]
51. cryzl1 ENSDARG00000026902 401 1.53 - - - 0.784 - - 0.746 - - crystallin, zeta (quinone reductase)-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-378]
52. CABZ01073405.1 CABZ01073405.1 275 1.53 - - - - - 0.724 0.806 - -
53. TMEM116 TMEM116 96 1.515 - - 0.789 - - 0.726 - - -
54. zgc:91985 zgc:91985 1517 1.489 - - - 0.778 - - 0.711 - -
55. prkacab ENSDARG00000016809 1441 1.476 - - - - - 0.772 0.704 - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-040801-208]
56. prkchb ENSDARG00000043243 126 1.463 - - - - - 0.750 0.713 - - protein kinase C, eta, b [Source:ZFIN;Acc:ZDB-GENE-041001-104]
57. six4a ENSDARG00000004695 413 1.457 - - - 0.712 - - 0.745 - - SIX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-010201-2]
58. C4H12orf39 C4H12orf39 73 1 1.000 - - - - - - - -
59. anpepb ENSDARG00000103878 8 1 1.000 - - - - - - - - alanyl (membrane) aminopeptidase b [Source:ZFIN;Acc:ZDB-GENE-030131-1253]
60. CABZ01021435.3 CABZ01021435.3 5 1 1.000 - - - - - - - -
61. gltpd2 ENSDARG00000067889, ENSDARG00000114510 27 1 1.000 - - - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
62. HIPK1 HIPK1 8 1 1.000 - - - - - - - -
63. LRRC41 LRRC41 11 1 1.000 - - - - - - - -
64. hamp2 hamp2 67 1 1.000 - - - - - - - -
65. BX323793.1 ENSDARG00000104134 24 1 1.000 - - - - - - - - 1-phosphatidylinositol phosphodiesterase-like [Source:NCBI gene;Acc:100331378]
66. gpr124 gpr124 25 1 1.000 - - - - - - - -
67. CABZ01062083.1 CABZ01062083.1 40 1 1.000 - - - - - - - -
68. Mar-03 Mar-03 44 1 1.000 - - - - - - - -
69. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 1 1.000 - - - - - - - - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
70. SH2D4A ENSDARG00000041378 6 1 1.000 - - - - - - - - SH2 domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-040426-932]
71. wu:fb64b08 wu:fb64b08 8 1 1.000 - - - - - - - -
72. xrra1 ENSDARG00000089578 18 1 1.000 - - - - - - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
73. alpi.2 ENSDARG00000053774 21 1 1.000 - - - - - - - - alkaline phosphatase, intestinal, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050626-142]
74. si:dkey-27i16.2 ENSDARG00000098293 48 1 1.000 - - - - - - - - si:dkey-27i16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9667]
75. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1 1.000 - - - - - - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
76. CR391995.1 ENSDARG00000098041 48 1 1.000 - - - - - - - -
77. PDE9A ENSDARG00000060280 58 1 1.000 - - - - - - - - phosphodiesterase 9A [Source:ZFIN;Acc:ZDB-GENE-130920-1]
78. pde6c ENSDARG00000100397 49 1 1.000 - - - - - - - - phosphodiesterase 6C, cGMP-specific, cone, alpha prime [Source:ZFIN;Acc:ZDB-GENE-040426-1664]
79. myo1f ENSDARG00000078734 100 1 1.000 - - - - - - - - myosin IF [Source:ZFIN;Acc:ZDB-GENE-081104-506]
80. si:dkeyp-100a1.5 si:dkeyp-100a1.5 8 1 1.000 - - - - - - - -
81. cd74a ENSDARG00000009087 20 1 1.000 - - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
82. slc5a9 ENSDARG00000005518 16 1 1.000 - - - - - - - - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
83. TRIM35_12 TRIM35_12 2 1 1.000 - - - - - - - -
84. FP102801.1 FP102801.1 294 1 1.000 - - - - - - - -
85. ifitm5 ENSDARG00000105153 132 1 1.000 - - - - - - - - interferon induced transmembrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8970]
86. ncaldb ENSDARG00000011334 123 1 1.000 - - - - - - - - neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]
87. lcp1 ENSDARG00000023188 298 1 1.000 - - - - - - - - lymphocyte cytosolic protein 1 (L-plastin) [Source:ZFIN;Acc:ZDB-GENE-991213-5]
88. ccdc37 ccdc37 36 1 1.000 - - - - - - - -
89. BX005294.4 BX005294.4 8 1 1.000 - - - - - - - -
90. ppm1na ENSDARG00000010231 3 1 1.000 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
91. akap10 ENSDARG00000059549 1 1 1.000 - - - - - - - - A kinase (PRKA) anchor protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2535]
92. BX927308.3 BX927308.3 126 1 1.000 - - - - - - - -
93. crybb1 ENSDARG00000068507 2255 1 1.000 - - - - - - - - crystallin, beta B1 [Source:ZFIN;Acc:ZDB-GENE-010813-1]
94. U1_48 U1_48 1 1 1.000 - - - - - - - -
95. CABZ01057633.1 CABZ01057633.1 39 1 1.000 - - - - - - - -
96. ENSDARG00000037617 ENSDARG00000037617 1 1 1.000 - - - - - - - -
97. esyt1b ENSDARG00000014239 8 1 1.000 - - - - - - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
98. sorcs3b ENSDARG00000077349 72 1 1.000 - - - - - - - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
99. CU570684.5 CU570684.5 55 1 1.000 - - - - - - - -
100. si:dkey-85k15.4 ENSDARG00000095047 25 1 1.000 - - - - - - - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]

There are 1545 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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