Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tnr

Gene Name Gene ID Reads Annotation
tnr ENSDARG00000020771 20 tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]










Genes with expression patterns similar to tnr

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tnr ENSDARG00000020771 20 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
2. sox19b ENSDARG00000040266 532 2.371 0.790 0.841 - - - 0.740 - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
3. mir92a-1 20 2 1.000 1.000 - - - - - - - microRNA 92a-1
4. efemp2b_1 ENSDARG00000020811 77 1.971 1.000 - - - - 0.971 - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
5. PLBD1 ENSDARG00000063313 1 1.971 1.000 - - - - 0.971 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
6. RIMS1 RIMS1 9 1.971 1.000 - - - - 0.971 - - -
7. KHNYN ENSDARG00000092488 10 1.971 1.000 - - - - 0.971 - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
8. rbfox3l rbfox3l 34 1.913 - - - - 0.942 0.971 - - -
9. aglb ENSDARG00000100352 22 1.903 1.000 - - - 0.903 - - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b [Source:ZFIN;Acc:ZDB-GENE-050309-54]
10. mmrn2a ENSDARG00000076135 37 1.857 1.000 - - - - - - 0.857 - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
11. lmx1a ENSDARG00000020354 111 1.854 1.000 - - - - - - 0.854 - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
12. si:ch211-190k17.31 si:ch211-190k17.31 29 1.849 1.000 0.849 - - - - - - -
13. zgc:174224_2 ENSDARG00000093875 22 1.82 - 1.000 - - - 0.820 - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
14. ntng1a ENSDARG00000014973 23 1.82 1.000 - - - - 0.820 - - - netrin g1a [Source:ZFIN;Acc:ZDB-GENE-091118-13]
15. CCSAP CCSAP 147 1.784 1.000 - - - - 0.784 - - -
16. zgc:173702 ENSDARG00000110229 411 1.767 - 0.796 - - - 0.971 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
17. WNK3 WNK3 36 1.731 1.000 0.731 - - - - - - -
18. btbd3b ENSDARG00000087517 107 1.731 1.000 0.731 - - - - - - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
19. fstl5 ENSDARG00000040198 213 1.731 1.000 0.731 - - - - - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
20. si:ch211-119o8.6 ENSDARG00000026972, ENSDARG00000115846 13 1.731 1.000 0.731 - - - - - - - si:ch211-119o8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-17]
21. si:dkey-21o19.6 si:dkey-21o19.6 18 1.731 1.000 0.731 - - - - - - -
22. zgc:114037_2 11 1.731 1.000 0.731 - - - - - - - zgc:114037
23. BX000430.1 ENSDARG00000112057 135 1.731 1.000 0.731 - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
24. aldh2.2_1 ENSDARG00000028087 279 1.717 1.000 - - - - - - 0.717 - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
25. rgs9bp ENSDARG00000009466 41 1.714 - - - - 0.743 0.971 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
26. mir15a-1 36 1.71 1.000 - 0.710 - - - - - - microRNA 15a-1
27. akt3a_1 ENSDARG00000104810 12 1.702 - 0.731 - - - 0.971 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
28. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1.702 - 0.731 - - - 0.971 - - -
29. si:ch211-232k18.2 si:ch211-232k18.2 2 1.702 - 0.731 - - - 0.971 - - -
30. TENM2 ENSDARG00000037122 48 1.702 - 0.731 - - - 0.971 - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
31. mstnb ENSDARG00000069133 3 1.702 - 0.731 - - - 0.971 - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
32. si:dkey-222f2.3 si:dkey-222f2.3 8 1.699 - 0.731 - - 0.968 - - - -
33. pax6b ENSDARG00000045936 349 1.692 0.822 - - - - 0.870 - - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
34. si:ch73-167f18.4 si:ch73-167f18.4 9 1.686 0.715 - - - - 0.971 - - -
35. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.673 - 0.731 - - - 0.942 - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
36. neto1l ENSDARG00000071596 57 1.673 0.895 - - - - 0.778 - - - neuropilin (NRP) and tolloid (TLL)-like 1, like [Source:ZFIN;Acc:ZDB-GENE-091207-1]
37. si:ch211-198c19.2 si:ch211-198c19.2 165 1.672 - - - - - 0.786 - 0.886 -
38. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1.672 0.820 - - - - 0.852 - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
39. SMARCAD1 SMARCAD1 104 1.663 - - - - 0.775 0.888 - - -
40. CABZ01038313.1 CABZ01038313.1 79 1.663 - 0.731 - - - - - 0.932 -
41. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1.657 - 0.731 - - - 0.926 - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
42. si:ch211-173p18.3_1 ENSDARG00000035821 36 1.653 - 0.731 - - 0.922 - - - - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
43. gphnb ENSDARG00000100851 118 1.652 - 0.731 - - - 0.921 - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
44. rhobtb2b ENSDARG00000089340 4 1.634 - 0.731 - - 0.903 - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
45. CABZ01055343.1 CABZ01055343.1 12 1.634 - 0.731 - - 0.903 - - - -
46. atf1 ENSDARG00000044301, ENSDARG00000109865 2 1.634 - 0.731 - - 0.903 - - - - activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
47. DNAJC14 ENSDARG00000105398 20 1.612 - 0.731 - - - - - 0.881 - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
48. thnsl2 ENSDARG00000032584 59 1.591 - 0.771 - - - 0.820 - - - threonine synthase-like 2 [Source:ZFIN;Acc:ZDB-GENE-051127-19]
49. efna3b ENSDARG00000098295 319 1.589 0.749 - - - - 0.840 - - - ephrin-A3b [Source:ZFIN;Acc:ZDB-GENE-011108-1]
50. si:ch73-346o4.3 si:ch73-346o4.3 29 1.573 - 0.731 - - - - - 0.842 -
51. ppapdc2 ppapdc2 67 1.571 - - - - - - - 0.746 0.825
52. syt13 ENSDARG00000012306 298 1.569 0.821 0.748 - - - - - - - synaptotagmin XIII [Source:ZFIN;Acc:ZDB-GENE-050417-135]
53. gdf10a ENSDARG00000095378 12 1.568 - 0.731 - - - 0.837 - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
54. cacng2a ENSDARG00000032565 99 1.557 0.705 - - - - 0.852 - - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
55. rnf207b ENSDARG00000012409, ENSDARG00000116638 139 1.549 0.818 0.731 - - - - - - - ring finger protein 207b [Source:ZFIN;Acc:ZDB-GENE-080227-9]
56. l3mbtl3 ENSDARG00000025983 12 1.531 - 0.731 - - 0.800 - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
57. glrbb ENSDARG00000052769, ENSDARG00000113828 467 1.527 - 0.815 - - - 0.712 - - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
58. PARP6 PARP6 119 1.513 - 0.731 - - - 0.782 - - -
59. lhfpl3 ENSDARG00000021595 107 1.511 0.771 - - - - 0.740 - - - LHFPL tetraspan subfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040801-180]
60. SGSM1 SGSM1 254 1.506 0.775 0.731 - - - - - - -
61. lbx1b ENSDARG00000018611 399 1.501 0.763 - - - - 0.738 - - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
62. ncam1a ENSDARG00000056181 193 1.492 0.744 - - - - 0.748 - - - neural cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-990415-31]
63. CR847906.1 ENSDARG00000099493 88 1.489 - 0.731 - - - - - 0.758 - protein NLRC3-like [Source:NCBI gene;Acc:571651]
64. tyro3 ENSDARG00000005356 4 1.478 - 0.731 - 0.747 - - - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
65. si:dkey-193i10.3 si:dkey-193i10.3 70 1.476 - 0.775 0.701 - - - - - -
66. zdhhc23b ENSDARG00000003899, ENSDARG00000116894 31 1.463 - 0.731 0.732 - - - - - - zinc finger, DHHC-type containing 23b [Source:ZFIN;Acc:ZDB-GENE-040808-13]
67. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.456 - 0.731 - - - 0.725 - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
68. EPM2AIP1 EPM2AIP1 4 1.454 - 0.731 0.723 - - - - - -
69. GRAMD3 GRAMD3 4 1.454 - 0.731 0.723 - - - - - -
70. TULP2 TULP2 38 1.445 - 0.731 - 0.714 - - - - -
71. sgms2 57 1.436 - 0.731 - - - - - 0.705 - sphingomyelin synthase 2, transcript variant X1
72. GADD45G GADD45G 382 1.435 - 0.731 - - - 0.704 - - -
73. DUSP19 DUSP19 10 1 1.000 - - - - - - - -
74. tdo2b ENSDARG00000023176 8 1 1.000 - - - - - - - - tryptophan 2,3-dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-030131-6014]
75. ZNF337_7 ZNF337_7 198 1 1.000 - - - - - - - -
76. pcdh1gb9 ENSDARG00000088475 71 1 1.000 - - - - - - - - protocadherin 1 gamma b 9 [Source:ZFIN;Acc:ZDB-GENE-041118-18]
77. FKBPL ENSDARG00000095322 82 1 1.000 - - - - - - - - FK506 binding protein like [Source:ZFIN;Acc:ZDB-GENE-030131-4744]
78. SLC16A1 SLC16A1 37 1 - 1.000 - - - - - - -
79. si:ch211-168h21.3 10 1 - 1.000 - - - - - - - si:ch211-168h21.3
80. slco4a1 ENSDARG00000075948 74 1 1.000 - - - - - - - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
81. VOPP1_1 VOPP1_1 73 1 1.000 - - - - - - - -
82. mapre3a ENSDARG00000020231 100 1 - 1.000 - - - - - - - microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88]
83. ARHGAP6 33 1 1.000 - - - - - - - - Rho GTPase activating protein 6
84. apoob ENSDARG00000026444, ENSDARG00000109942 4 1 1.000 - - - - - - - - apolipoprotein O, b [Source:ZFIN;Acc:ZDB-GENE-041001-40]
85. xkr6 xkr6 286 1 1.000 - - - - - - - -
86. CR759879.1 ENSDARG00000088069 1 1 1.000 - - - - - - - - interferon-induced protein with tetratricopeptide repeats 5 [Source:NCBI gene;Acc:572297]
87. gpr19 ENSDARG00000102226 17 1 1.000 - - - - - - - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
88. si:dkey-34f16.9 si:dkey-34f16.9 1 1 1.000 - - - - - - - -
89. tdp2a ENSDARG00000069941 10 1 - 1.000 - - - - - - - tyrosyl-DNA phosphodiesterase 2a [Source:ZFIN;Acc:ZDB-GENE-110218-1]
90. cd22 ENSDARG00000053005 3 1 1.000 - - - - - - - - cd22 molecule [Source:ZFIN;Acc:ZDB-GENE-050522-521]
91. si:dkey-80c24.1 ENSDARG00000070692 1 1 1.000 - - - - - - - - si:dkey-80c24.1 [Source:ZFIN;Acc:ZDB-GENE-061207-69]
92. rhbdd3 ENSDARG00000079816 2 1 1.000 - - - - - - - - rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
93. FAM161A ENSDARG00000089742 41 1 - 1.000 - - - - - - - family with sequence similarity 161, member A [Source:ZFIN;Acc:ZDB-GENE-110310-1]
94. itfg2 ENSDARG00000002174 114 1 1.000 - - - - - - - - integrin alpha FG-GAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041008-161]
95. si:dkey-191g9.5 ENSDARG00000056080 60 1 1.000 - - - - - - - - si:dkey-191g9.5 [Source:ZFIN;Acc:ZDB-GENE-090313-217]
96. tbkbp1 ENSDARG00000061473 24 1 1.000 - - - - - - - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
97. rassf4 ENSDARG00000012460 43 1 1.000 - - - - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
98. ephb2a ENSDARG00000037373, ENSDARG00000114174 104 1 1.000 - - - - - - - - eph receptor B2a [Source:ZFIN;Acc:ZDB-GENE-070713-2]
99. CR382372.2 CR382372.2 136 1 1.000 - - - - - - - -
100. meis2a ENSDARG00000098240 5 1 1.000 - - - - - - - - Meis homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-020122-2]

There are 1227 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA