Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for svopa

Gene Name Gene ID Reads Annotation
svopa ENSDARG00000056833 14 SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]










Genes with expression patterns similar to svopa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. svopa ENSDARG00000056833 14 7 - 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]
2. pi15b ENSDARG00000061292 1 2.952 - - - 1.000 1.000 0.952 - - - peptidase inhibitor 15b [Source:ZFIN;Acc:ZDB-GENE-070912-590]
3. arhgef19 ENSDARG00000078853 17 2.738 - 1.000 - - - 0.952 - - 0.786 Rho guanine nucleotide exchange factor (GEF) 19 [Source:ZFIN;Acc:ZDB-GENE-090313-243]
4. si:ch211-251p5.3 si:ch211-251p5.3 39 2 - 1.000 - - 1.000 - - - -
5. AC024175.11 AC024175.11 12 2 - 1.000 - 1.000 - - - - -
6. TTC40 TTC40 1 2 - 1.000 - - 1.000 - - - -
7. KIF9 ENSDARG00000031693 11 2 - 1.000 - 1.000 - - - - - kinesin family member 9 [Source:ZFIN;Acc:ZDB-GENE-160728-129]
8. zgc:175107 ENSDARG00000075417 39 2 - - - 1.000 1.000 - - - - zgc:175107 [Source:ZFIN;Acc:ZDB-GENE-080220-38]
9. XYLT2 ENSDARG00000059557 1 2 - 1.000 - - 1.000 - - - - xylosyltransferase II [Source:ZFIN;Acc:ZDB-GENE-081022-125]
10. si:dkey-43b14.6 si:dkey-43b14.6 20 1.952 - 1.000 - - - 0.952 - - -
11. si:dkey-14o18.1 si:dkey-14o18.1 108 1.952 - - - 1.000 - 0.952 - - -
12. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1.952 - 1.000 - - - 0.952 - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
13. si:ch211-225h9.2 si:ch211-225h9.2 16 1.952 - 1.000 - - - 0.952 - - -
14. ntsr1 ENSDARG00000077577, ENSDARG00000112950 14 1.952 - 1.000 - - - 0.952 - - - neurotensin receptor 1 (high affinity) [Source:ZFIN;Acc:ZDB-GENE-090313-372]
15. napgl napgl 39 1.952 - 1.000 - - - 0.952 - - -
16. cdc42ep2 ENSDARG00000053959 32 1.902 - 1.000 - - 0.902 - - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
17. fbxo43 ENSDARG00000104186 40 1.841 - 0.889 - - - 0.952 - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
18. ppid_1 ENSDARG00000038835 4 1.825 - - - 0.825 1.000 - - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
19. FP103005.1 ENSDARG00000099852 4 1.812 - - - 1.000 - 0.812 - - -
20. PSMB11 PSMB11 3 1.812 - - - 1.000 - 0.812 - - -
21. fam196ab 2 1.797 - - 0.797 1.000 - - - - - family with sequence similarity 196, member Ab
22. cdhr1a ENSDARG00000004643 7 1.797 - 1.000 0.797 - - - - - - cadherin-related family member 1a [Source:ZFIN;Acc:ZDB-GENE-040924-4]
23. FRMD7 ENSDARG00000068958 17 1.797 - - 0.797 1.000 - - - - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
24. omga ENSDARG00000086573 3 1.797 - 1.000 0.797 - - - - - - oligodendrocyte myelin glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-091204-203]
25. grin1b ENSDARG00000025728 4 1.797 - - 0.797 1.000 - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 1b [Source:ZFIN;Acc:ZDB-GENE-051202-2]
26. CR377211.1 ENSDARG00000079364 24 1.781 - 1.000 - - 0.781 - - - - olfactory receptor 2T2-like [Source:NCBI gene;Acc:103910036]
27. zp3b ENSDARG00000039828 15 1.78 - - - - 1.000 0.780 - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
28. spice1 ENSDARG00000004647 27 1.78 - 1.000 - - - 0.780 - - - spindle and centriole associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041212-64]
29. SLITRK4 ENSDARG00000079781 54 1.761 - 1.000 - - 0.761 - - - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
30. si:ch211-117m20.4 ENSDARG00000094286 7 1.761 - - - 1.000 0.761 - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
31. trhrb ENSDARG00000036159 11 1.756 - 1.000 - - 0.756 - - - - thyrotropin-releasing hormone receptor b [Source:ZFIN;Acc:ZDB-GENE-060503-382]
32. neurod6a ENSDARG00000040008 17 1.75 - 1.000 - 0.750 - - - - - neuronal differentiation 6a [Source:ZFIN;Acc:ZDB-GENE-010608-1]
33. AKNA_1 AKNA_1 2 1.736 - 1.000 - - - - - - 0.736
34. smtna ENSDARG00000074652 6 1.714 - 1.000 - 0.714 - - - - - smoothelin a [Source:ZFIN;Acc:ZDB-GENE-091204-245]
35. hbaa2 ENSDARG00000069735 10 1.688 - - - - - 0.952 - - 0.736 hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
36. ifnlr1 ENSDARG00000087131 73 1.688 - 0.736 - - - 0.952 - - - interferon lambda receptor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-5]
37. th ENSDARG00000030621, ENSDARG00000109947 6 1.629 - - - - 0.921 - - - 0.708 tyrosine hydroxylase [Source:ZFIN;Acc:ZDB-GENE-990621-5]
38. fam19a5 fam19a5 8 1.614 - - 0.870 - - - - - 0.744
39. slc1a9 ENSDARG00000098269 12 1.592 - - 0.797 - 0.795 - - - - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
40. si:dkey-19a16.2 ENSDARG00000058794 8 1.545 - - - - - 0.812 - 0.733 - si:dkey-19a16.2 [Source:ZFIN;Acc:ZDB-GENE-050208-493]
41. MFAP4_1 MFAP4_1 3 1.527 - - 0.797 - - - - - 0.730
42. si:ch211-197e7.8 si:ch211-197e7.8 4 1.494 - - - - 0.761 - - 0.733 -
43. CABZ01048021.1 CABZ01048021.1 15 1 - 1.000 - - - - - - -
44. cdkn1bb ENSDARG00000054271 0 1 - 1.000 - - - - - - - cyclin-dependent kinase inhibitor 1Bb [Source:ZFIN;Acc:ZDB-GENE-030521-13]
45. rpgrip1l ENSDARG00000051754 2 1 - - - 1.000 - - - - - RPGRIP1-like [Source:ZFIN;Acc:ZDB-GENE-081104-81]
46. CR759920.3 CR759920.3 8 1 - 1.000 - - - - - - -
47. si:dkey-61m24.1 0 1 - - - 1.000 - - - - - si:dkey-61m24.1
48. FBXL21 FBXL21 6 1 - 1.000 - - - - - - -
49. urgcp ENSDARG00000036767 6 1 - - - 1.000 - - - - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
50. ipp ENSDARG00000075339 3 1 - 1.000 - - - - - - - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
51. si:ch211-232m19.4 19 1 - - - 1.000 - - - - - si:ch211-232m19.4
52. wisp1a ENSDARG00000054331 26 1 - 1.000 - - - - - - - WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178]
53. CU984579.1 ENSDARG00000116863 15 1 - 1.000 - - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
54. fam57bb ENSDARG00000074564 2 1 - - - - 1.000 - - - - family with sequence similarity 57, member Bb [Source:ZFIN;Acc:ZDB-GENE-110603-2]
55. KCNAB3 KCNAB3 134 1 - 1.000 - - - - - - -
56. CR847844.5 CR847844.5 5 1 - 1.000 - - - - - - -
57. zgc:113516 20 1 - 1.000 - - - - - - - zgc:113516
58. or111-11 ENSDARG00000041019 5 1 - - - - 1.000 - - - - odorant receptor, family D, subfamily 111, member 11 [Source:ZFIN;Acc:ZDB-GENE-010308-10]
59. nanog ENSDARG00000075113 10 1 - 1.000 - - - - - - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
60. si:dkey-258f14.3 ENSDARG00000075974 9 1 - - - - 1.000 - - - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
61. CABZ01056274.1 CABZ01056274.1 3 1 - 1.000 - - - - - - -
62. ZNF768 ZNF768 1 1 - 1.000 - - - - - - -
63. BX640518.1 BX640518.1 24 1 - 1.000 - - - - - - -
64. si:ch211-274k16.4 si:ch211-274k16.4 6 1 - - - 1.000 - - - - -
65. atad1b ENSDARG00000056609 40 1 - 1.000 - - - - - - - ATPase family, AAA domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030616-44]
66. pcsk7 ENSDARG00000069968 5 1 - 1.000 - - - - - - - proprotein convertase subtilisin/kexin type 7 [Source:ZFIN;Acc:ZDB-GENE-030131-7293]
67. phc3 ENSDARG00000074604 2 1 - - - - 1.000 - - - - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
68. dnajc5b ENSDARG00000058147 6 1 - - - - 1.000 - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
69. si:dkey-65b12.13 si:dkey-65b12.13 7 1 - 1.000 - - - - - - -
70. CABZ01085394.1 CABZ01085394.1 0 1 - - - - 1.000 - - - -
71. si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 1 - - - - 1.000 - - - - si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]
72. diras1b ENSDARG00000009372 0 1 - 1.000 - - - - - - - DIRAS family, GTP-binding RAS-like 1b [Source:ZFIN;Acc:ZDB-GENE-070912-620]
73. gpr34b ENSDARG00000002959 0 1 - - - 1.000 - - - - - G protein-coupled receptor 34b [Source:ZFIN;Acc:ZDB-GENE-040823-1]
74. zgc:113176 ENSDARG00000040487 30 1 - - - - 1.000 - - - - zgc:113176 [Source:ZFIN;Acc:ZDB-GENE-050327-60]
75. cd151l ENSDARG00000068629 16 1 - 1.000 - - - - - - - CD151 antigen, like [Source:ZFIN;Acc:ZDB-GENE-040426-1868]
76. MID2 ENSDARG00000034871 0 1 - 1.000 - - - - - - - midline 2 [Source:ZFIN;Acc:ZDB-GENE-090220-1]
77. pdha1b ENSDARG00000010555, ENSDARG00000114832 4 1 - - - 1.000 - - - - - pyruvate dehydrogenase E1 alpha 1 subunit b [Source:ZFIN;Acc:ZDB-GENE-040718-96]
78. PRODH PRODH 13 1 - 1.000 - - - - - - -
79. stk35_1 ENSDARG00000086856 3 1 - 1.000 - - - - - - - serine/threonine kinase 35 [Source:ZFIN;Acc:ZDB-GENE-061103-553]
80. shank3a ENSDARG00000063332 5 1 - - - - 1.000 - - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
81. taar14e ENSDARG00000090372, ENSDARG00000112236 0 1 - - - 1.000 - - - - - trace amine associated receptor 14e [Source:ZFIN;Acc:ZDB-GENE-041210-317]
82. si:dkey-167i21.4 si:dkey-167i21.4 12 1 - 1.000 - - - - - - -
83. si:ch211-222k6.3 ENSDARG00000071578 127 1 - - - 1.000 - - - - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
84. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1 - - - 1.000 - - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
85. CABZ01001466.1 CABZ01001466.1 1 1 - - - - 1.000 - - - -
86. dzip1l ENSDARG00000074265 61 1 - 1.000 - - - - - - - DAZ interacting zinc finger protein 1-like [Source:ZFIN;Acc:ZDB-GENE-051113-196]
87. mir30b 4 1 - - - 1.000 - - - - - microRNA 30b
88. si:dkey-61f9.1 ENSDARG00000070414, ENSDARG00000112842 1 1 - 1.000 - - - - - - - si:dkey-61f9.1 [Source:ZFIN;Acc:ZDB-GENE-041210-13]
89. MYCT1 MYCT1 64 1 - 1.000 - - - - - - -
90. pcdh1a4 0 1 - - - 1.000 - - - - - protocadherin 1 alpha 4
91. hmgb2a ENSDARG00000029722 28 1 - 1.000 - - - - - - - high mobility group box 2a [Source:ZFIN;Acc:ZDB-GENE-051120-126]
92. si:dkey-182i3.9 ENSDARG00000096575 56 1 - 1.000 - - - - - - - si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
93. CU464087.2 CU464087.2 15 1 - 1.000 - - - - - - -
94. TRIM35_7 TRIM35_7 22 1 - 1.000 - - - - - - -
95. ATP6V1C2 ENSDARG00000070440 2 1 - - - 1.000 - - - - - ATPase H+ transporting V1 subunit C2 [Source:ZFIN;Acc:ZDB-GENE-131127-65]
96. si:dkey-246g23.2 ENSDARG00000062964 5 1 - 1.000 - - - - - - - si:dkey-246g23.2 [Source:ZFIN;Acc:ZDB-GENE-050419-100]
97. LPHN2_1 LPHN2_1 3 1 - 1.000 - - - - - - -
98. CR538726.1 ENSDARG00000097179 321 1 - 1.000 - - - - - - -
99. zgc:173708 zgc:173708 2 1 - - - - 1.000 - - - -
100. ONECUT2 ENSDARG00000090387 8 1 - 1.000 - - - - - - - one cut homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-120215-73]

There are 867 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA