Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for spg20b

Gene Name Gene ID Reads Annotation
spg20b 224 spastic paraplegia 20b (Troyer syndrome)










Genes with expression patterns similar to spg20b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. spg20b 224 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spastic paraplegia 20b (Troyer syndrome)
2. rwdd2b ENSDARG00000055426 294 1.733 - 0.899 - - - - 0.834 - - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
3. hsd17b7 ENSDARG00000088140 185 1.699 - - - - - - 0.919 - 0.780 hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
4. stx11a ENSDARG00000044039 39 1.696 - - - - - - 0.852 - 0.844 syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
5. gnptg ENSDARG00000038566 259 1.668 - - - - - - 0.885 - 0.783 N-acetylglucosamine-1-phosphate transferase subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040625-18]
6. aldh3a2a ENSDARG00000028259 591 1.601 - - - - - - 0.860 - 0.741 aldehyde dehydrogenase 3 family, member A2a [Source:ZFIN;Acc:ZDB-GENE-040718-74]
7. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 1.6 - - - - - - 0.888 - 0.712 family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]
8. dip2c dip2c 248 1.598 - 0.792 - - - - 0.806 - -
9. enosf1 ENSDARG00000038359 209 1.587 - - - - - - 0.773 - 0.814 enolase superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-780]
10. arhgap4a ENSDARG00000039265 181 1.584 - - - - - 0.749 - - 0.835 Rho GTPase activating protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1229]
11. si:ch211-229b6.1 ENSDARG00000093422 151 1.577 - - - - - - 0.870 - 0.707 si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]
12. rnf19b ENSDARG00000060926 157 1.576 0.745 - - - - - 0.831 - - ring finger protein 19B [Source:ZFIN;Acc:ZDB-GENE-060503-281]
13. si:ch211-199c19.4 si:ch211-199c19.4 27 1.558 0.706 - - - - - 0.852 - -
14. MRPL53_1 MRPL53_1 83 1.553 - - - - - 0.731 - - 0.822
15. slc7a10a ENSDARG00000008100 178 1.529 - - - - - - 0.784 - 0.745 solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a [Source:ZFIN;Acc:ZDB-GENE-080116-1]
16. ablim3 ENSDARG00000088168, ENSDARG00000112071, ENSDARG00000114074 573 1.514 - 0.731 - - - - - - 0.783 actin binding LIM protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1122]
17. slc16a5 slc16a5 173 1.51 - 0.780 - - - - - - 0.730
18. cyp7c1 cyp7c1 1214 1.506 0.795 - - - - - 0.711 - -
19. ZNF385D ENSDARG00000086162 202 1.498 - 0.709 - - - - - - 0.789 zinc finger protein 385D [Source:ZFIN;Acc:ZDB-GENE-130201-2]
20. fam102aa ENSDARG00000102566 903 1.483 0.719 - - - - - 0.764 - - family with sequence similarity 102, member Aa [Source:ZFIN;Acc:ZDB-GENE-081104-233]
21. ADAMTSL3 ENSDARG00000027903 278 1.482 - - - - - - 0.711 - 0.771 ADAMTS-like 3 [Source:ZFIN;Acc:ZDB-GENE-121030-8]
22. faxdc2 ENSDARG00000023820 260 1.464 - - - - - - 0.753 - 0.711 fatty acid hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2907]
23. ddr2l ENSDARG00000103830 1921 1.461 0.744 - - - - - 0.717 - - discoidin domain receptor family, member 2, like [Source:ZFIN;Acc:ZDB-GENE-041210-162]
24. ttc23 ENSDARG00000022160 101 1.46 - 0.716 - - 0.744 - - - - tetratricopeptide repeat domain 23 [Source:ZFIN;Acc:ZDB-GENE-050419-126]
25. SLC47A1_1 SLC47A1_1 130 1.446 0.741 - - - 0.705 - - - -
26. nek6 ENSDARG00000037963 316 1.445 - - - - - - 0.707 - 0.738 NIMA-related kinase 6 [Source:ZFIN;Acc:ZDB-GENE-040724-133]
27. MYO1D ENSDARG00000036863 768 1.433 - - - - - - 0.718 - 0.715 myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
28. 5_8S_rRNA_2 5_8S_rRNA_2 424 0.943 - - - - - - 0.943 - -
29. si:ch73-191k20.4 37 0.941 - - - - - - 0.941 - - si:ch73-191k20.4, transcript variant X1
30. macrod1 ENSDARG00000029609 66 0.937 - - - - - - 0.937 - - MACRO domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-100]
31. eltd1 eltd1 295 0.935 - - - - - - 0.935 - -
32. myo3a ENSDARG00000010186 117 0.934 - - - - - - 0.934 - - myosin IIIA [Source:ZFIN;Acc:ZDB-GENE-041026-4]
33. slc52a3 ENSDARG00000042737 67 0.931 - - - - - - 0.931 - - solute carrier family 52 (riboflavin transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-060421-4490]
34. EVA1B EVA1B 22 0.929 - - - - - - 0.929 - -
35. ENSDARG00000023499 ENSDARG00000023499 395 0.929 - - - - - - 0.929 - -
36. phpt1 ENSDARG00000045567 211 0.925 - - - - - - 0.925 - - phosphohistidine phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-85]
37. BX324198.2 BX324198.2 84 0.925 - - - - - - 0.925 - -
38. fam46a fam46a 92 0.924 - - - - - - 0.924 - -
39. thtpa ENSDARG00000063049 286 0.92 - - - - - - 0.920 - - thiamine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-070502-2]
40. ints6 ENSDARG00000013025 334 0.916 - 0.916 - - - - - - - integrator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-070906-1]
41. zgc:162297 ENSDARG00000100912, ENSDARG00000114809 12 0.914 - - - - - - 0.914 - - zgc:162297 [Source:ZFIN;Acc:ZDB-GENE-070410-62]
42. si:ch211-110p13.9 ENSDARG00000093821 82 0.914 - - - - - - 0.914 - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
43. brip1 ENSDARG00000074410, ENSDARG00000113993 501 0.914 - - - - - - 0.914 - - BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
44. mtx3 ENSDARG00000090195 42 0.908 - - - - - - 0.908 - - metaxin 3 [Source:ZFIN;Acc:ZDB-GENE-021210-3]
45. si:dkey-102g19.3 ENSDARG00000086337 26 0.908 - - - - - - 0.908 - - si:dkey-102g19.3 [Source:ZFIN;Acc:ZDB-GENE-091204-230]
46. C4H12orf45 C4H12orf45 483 0.906 - - - - - - 0.906 - -
47. dhx34 ENSDARG00000061168 349 0.905 - - - - - - 0.905 - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:ZFIN;Acc:ZDB-GENE-061207-30]
48. tbcela ENSDARG00000002682 1179 0.903 - - - - - - 0.903 - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
49. si:dkey-182i3.9 ENSDARG00000096575 56 0.901 - - - - - - 0.901 - - si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
50. ITPK1 ITPK1 78 0.901 - - - - - - 0.901 - -
51. HIST2H4A HIST2H4A 33 0.9 - - - - - - 0.900 - -
52. KCNK7 ENSDARG00000057331 5 0.9 - - - - - - 0.900 - - potassium channel, subfamily K, member 7 [Source:ZFIN;Acc:ZDB-GENE-110304-2]
53. ftr56 ENSDARG00000030954 23 0.9 - - - - - - 0.900 - - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
54. si:ch211-38m6.6 ENSDARG00000076959 12 0.9 - - - - - - 0.900 - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
55. CABZ01058107.1 ENSDARG00000112826 8 0.9 - - - - - - 0.900 - - C-type lectin domain family 4 member M-like [Source:NCBI gene;Acc:110440085]
56. mxtx1 ENSDARG00000069382 32 0.9 - - - - - - 0.900 - - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
57. saga ENSDARG00000012610 63 0.9 - - - - - - 0.900 - - S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
58. mrps22 ENSDARG00000018073, ENSDARG00000115927 177 0.9 - - - - - - 0.900 - - mitochondrial ribosomal protein S22 [Source:ZFIN;Acc:ZDB-GENE-070615-31]
59. adam19b ENSDARG00000067545 162 0.9 - - - - - - 0.900 - - ADAM metallopeptidase domain 19b [Source:ZFIN;Acc:ZDB-GENE-070705-541]
60. si:ch211-106g4.2 si:ch211-106g4.2 6 0.9 - - - - - - 0.900 - -
61. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 0.9 - - - - - - 0.900 - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
62. knop1 ENSDARG00000077721 2198 0.897 - - - - - - 0.897 - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
63. PKN2 ENSDARG00000101293 358 0.897 - - - - - - 0.897 - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
64. tnfaip2b ENSDARG00000058160 622 0.896 - 0.896 - - - - - - - tumor necrosis factor, alpha-induced protein 2b [Source:ZFIN;Acc:ZDB-GENE-081107-56]
65. tmem187 ENSDARG00000051989 136 0.893 - - - - - - 0.893 - - transmembrane protein 187 [Source:ZFIN;Acc:ZDB-GENE-090313-366]
66. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 0.893 - - - - - - 0.893 - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
67. cep72 ENSDARG00000105258 344 0.893 - - - - - - 0.893 - - centrosomal protein 72 [Source:ZFIN;Acc:ZDB-GENE-101115-1]
68. si:dkey-102c8.1 si:dkey-102c8.1 85 0.892 - - - - - - 0.892 - -
69. si:ch211-74m13.3 ENSDARG00000076144 55 0.89 - - - - - - 0.890 - - si:ch211-74m13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-219]
70. BX571811.1 ENSDARG00000105621 25 0.89 - - - - - - 0.890 - -
71. BX548021.2_1 BX548021.2_1 164 0.89 - - - - - - 0.890 - -
72. abca4a ENSDARG00000057169 27 0.89 - - - - - - 0.890 - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
73. tmem63bb ENSDARG00000106631 503 0.888 - 0.888 - - - - - - - transmembrane protein 63Bb [Source:NCBI gene;Acc:569678]
74. hbp1 ENSDARG00000028517 571 0.888 - - - - - - 0.888 - - HMG-box transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-414]
75. hivep3b ENSDARG00000037154 114 0.887 - - - - - - 0.887 - - human immunodeficiency virus type I enhancer binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-100922-42]
76. NFKBIB ENSDARG00000030087, ENSDARG00000109444 306 0.887 - - - - - - 0.887 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:ZFIN;Acc:ZDB-GENE-070705-529]
77. slc30a10 ENSDARG00000103983 46 0.886 - - - - - - 0.886 - - solute carrier family 30, member 10 [Source:ZFIN;Acc:ZDB-GENE-060608-2]
78. fbxw2 ENSDARG00000009745 618 0.886 - - - - - - 0.886 - - F-box and WD repeat domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-303]
79. fam204a ENSDARG00000039699, ENSDARG00000114877 1178 0.884 - - - - - - 0.884 - - family with sequence similarity 204, member A [Source:ZFIN;Acc:ZDB-GENE-040718-271]
80. ITGA2 ITGA2 40 0.883 - - - - - - 0.883 - -
81. cdk10 ENSDARG00000034256 166 0.883 - - - - - - 0.883 - - cyclin-dependent kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050417-94]
82. BX465186.1 ENSDARG00000093047 28 0.883 - - - - - - 0.883 - -
83. pfkfb4 pfkfb4 194 0.883 - - - - - - 0.883 - -
84. dmrta2 ENSDARG00000039412 328 0.881 - - - - - - 0.881 - - DMRT-like family A2 [Source:ZFIN;Acc:ZDB-GENE-041116-2]
85. rin1a ENSDARG00000079095 99 0.879 - - - - - - 0.879 - - Ras and Rab interactor 1a [Source:ZFIN;Acc:ZDB-GENE-091204-129]
86. zgc:195282 ENSDARG00000079488 475 0.878 - - - - - - 0.878 - - zgc:195282 [Source:ZFIN;Acc:ZDB-GENE-081022-208]
87. klhl23 ENSDARG00000078475 92 0.877 - - - - - - - - 0.877 kelch-like family member 23 [Source:ZFIN;Acc:ZDB-GENE-081104-458]
88. acss1 ENSDARG00000044142, ENSDARG00000109700 516 0.877 - - - - - - 0.877 - - acyl-CoA synthetase short chain family member 1 [Source:ZFIN;Acc:ZDB-GENE-050320-139]
89. CR407594.2 CR407594.2 145 0.875 - - - - - - 0.875 - -
90. sumf1 ENSDARG00000044203, ENSDARG00000114368 245 0.875 - - - - - - 0.875 - - sulfatase modifying factor 1 [Source:ZFIN;Acc:ZDB-GENE-060421-3113]
91. SPAG9 ENSDARG00000078142 629 0.875 - - - - - - 0.875 - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
92. otud4 ENSDARG00000077810 120 0.874 - - - - - - 0.874 - - OTU deubiquitinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5338]
93. crtac1a ENSDARG00000059826 22 0.874 - - - - - - 0.874 - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
94. otud3 ENSDARG00000022648 263 0.873 - - - - - - 0.873 - - OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
95. habp2 ENSDARG00000057498 75 0.872 - - - - - - 0.872 - - hyaluronan binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4721]
96. LYAR ENSDARG00000098507 1506 0.871 - - - - - - 0.871 - - Ly1 antibody reactive homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-040426-1414]
97. PHF13 ENSDARG00000102023 1102 0.87 - - - - - - 0.870 - - PHD finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-121113-2]
98. agps ENSDARG00000042821 203 0.87 - - - - - - 0.870 - - alkylglycerone phosphate synthase [Source:ZFIN;Acc:ZDB-GENE-031118-14]
99. LRCH1 ENSDARG00000078778 407 0.87 - - - - - - 0.870 - - leucine-rich repeats and calponin homology (CH) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1783]
100. si:ch211-66k16.20 si:ch211-66k16.20 162 0.869 - - - - - - 0.869 - -

There are 745 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA