Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ablim3

Gene Name Gene ID Reads Annotation
ablim3 ENSDARG00000088168, ENSDARG00000112071, ENSDARG00000114074 573 actin binding LIM protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1122]










Genes with expression patterns similar to ablim3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ablim3 ENSDARG00000088168, ENSDARG00000112071, ENSDARG00000114074 573 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 actin binding LIM protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1122]
2. setd3 ENSDARG00000016513 1507 2.175 - - - - - 0.717 0.749 - 0.709 SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
3. SORCS2 ENSDARG00000077465 185 1.688 - - - - - 0.796 - - 0.892 sortilin-related VPS10 domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-130530-825]
4. KDM4C ENSDARG00000061504, ENSDARG00000111347, ENSDARG00000114179 383 1.63 - - - - - 0.878 0.752 - - lysine (K)-specific demethylase 4C [Source:ZFIN;Acc:ZDB-GENE-070209-38]
5. TNS1 TNS1 628 1.621 - - - - - 0.830 0.791 - -
6. hsp70l_1 ENSDARG00000055723 72 1.618 - - - - - 0.744 - - 0.874 heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
7. CABZ01084569.1 CABZ01084569.1 650 1.611 - - - - - 0.887 0.724 - -
8. mpzl3 959 1.599 - - - 0.780 - - - - 0.819 myelin protein zero-like 3
9. slc16a5 slc16a5 173 1.589 - 0.716 - - - - - - 0.873
10. kctd13 ENSDARG00000044769, ENSDARG00000112000 569 1.579 - 0.829 - - - 0.750 - - - potassium channel tetramerization domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-060825-162]
11. opa1_1 ENSDARG00000070801 1424 1.576 - - - - - 0.792 0.784 - - optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
12. akap6 ENSDARG00000077295 1382 1.552 - - - - - 0.745 0.807 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
13. med24 ENSDARG00000099431 893 1.549 - - - - - 0.756 0.793 - - mediator complex subunit 24 [Source:ZFIN;Acc:ZDB-GENE-030131-2341]
14. C8H22orf39 C8H22orf39 1236 1.548 - - - - - - 0.774 - 0.774
15. cecr1a 836 1.547 - - - 0.765 - - - - 0.782 cat eye syndrome chromosome region, candidate 1a
16. pdcd2l ENSDARG00000002754 417 1.545 - - - - - 0.770 0.775 - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
17. BX005368.2 BX005368.2 702 1.541 - - - - - 0.743 0.798 - -
18. CPXM1 CPXM1 201 1.535 - - - - - - 0.771 - 0.764
19. lin7a ENSDARG00000013414 1589 1.534 - - - - - 0.790 0.744 - - lin-7 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-1665]
20. cilp ENSDARG00000053362 1429 1.534 - 0.731 - - - - 0.803 - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
21. ttll12 ENSDARG00000103537 364 1.531 - - - - - - 0.717 - 0.814 tubulin tyrosine ligase-like family, member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-697]
22. si:dkeyp-33e11.2 si:dkeyp-33e11.2 232 1.523 0.707 - - - - 0.816 - - -
23. BX927294.1 BX927294.1 361 1.521 - 0.775 - - - 0.746 - - -
24. fem1c ENSDARG00000102147 336 1.521 - - - - - - 0.729 - 0.792 fem-1 homolog c (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-031008-3]
25. ITGB1BP2 ENSDARG00000030176 2472 1.52 - - - - - 0.723 0.797 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
26. pigq ENSDARG00000038097 486 1.516 - 0.809 - - - - - - 0.707 phosphatidylinositol glycan anchor biosynthesis, class Q [Source:ZFIN;Acc:ZDB-GENE-030131-9793]
27. mir133b_1 671 1.514 - - - - 0.732 - 0.782 - - microRNA 133b
28. spg20b 224 1.514 - 0.731 - - - - - - 0.783 spastic paraplegia 20b (Troyer syndrome)
29. fbxw4 ENSDARG00000033551 645 1.51 - - - - - 0.733 - - 0.777 F-box and WD repeat domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-000516-1]
30. ptcd1 ENSDARG00000076176 281 1.506 - - - - - - 0.715 - 0.791 pentatricopeptide repeat domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6146]
31. CR387996.2 CR387996.2 1272 1.506 - 0.802 - - - - 0.704 - -
32. aifm1 ENSDARG00000058088, ENSDARG00000117164 2038 1.504 - 0.732 - - - - 0.772 - - apoptosis-inducing factor, mitochondrion-associated 1 [Source:ZFIN;Acc:ZDB-GENE-030826-11]
33. skilb ENSDARG00000022904 300 1.502 - - - - - 0.730 - - 0.772 SKI-like proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-080723-40]
34. ndufs4 ENSDARG00000052840, ENSDARG00000110036 3441 1.501 - - - 0.794 - - 0.707 - - NADH:ubiquinone oxidoreductase subunit S4 [Source:ZFIN;Acc:ZDB-GENE-050522-421]
35. smyd1a ENSDARG00000009280 1503 1.495 - - - - 0.718 - 0.777 - - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
36. coq2 ENSDARG00000059510 505 1.494 - - - - - - 0.736 - 0.758 coenzyme Q2 4-hydroxybenzoate polyprenyltransferase [Source:ZFIN;Acc:ZDB-GENE-070410-84]
37. BX664721.5 BX664721.5 462 1.494 - - - - - 0.755 0.739 - -
38. si:dkey-251i10.2 ENSDARG00000093957 4424 1.493 0.780 - - - - - 0.713 - - si:dkey-251i10.2 [Source:ZFIN;Acc:ZDB-GENE-050506-102]
39. tenm1 ENSDARG00000003403 148 1.493 - 0.717 - - - 0.776 - - - teneurin transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060531-26]
40. synpo2b ENSDARG00000077157 1009 1.488 - - - - - 0.705 0.783 - - synaptopodin 2b [Source:ZFIN;Acc:ZDB-GENE-101230-1]
41. ITPA ENSDARG00000057529 493 1.468 - - - - - 0.713 0.755 - - inosine triphosphatase (nucleoside triphosphate pyrophosphatase) [Source:ZFIN;Acc:ZDB-GENE-070705-218]
42. espl1 ENSDARG00000075354 818 1.466 - - - - - 0.706 0.760 - - extra spindle pole bodies like 1, separase [Source:ZFIN;Acc:ZDB-GENE-030131-5188]
43. snai1b ENSDARG00000046019 886 1.463 - 0.740 - - - 0.723 - - - snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
44. abhd14a ENSDARG00000058367 546 1.46 0.743 - - - - 0.717 - - - abhydrolase domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-040426-2428]
45. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 1.459 - - - 0.704 - - 0.755 - - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
46. stxbp3 ENSDARG00000008142 2604 1.456 - - - - 0.726 - 0.730 - - syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
47. gpatch4 ENSDARG00000091931 923 1.454 - - - - - 0.721 0.733 - - G patch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041008-158]
48. ust ENSDARG00000006044 322 1.453 - 0.741 - - - 0.712 - - - uronyl-2-sulfotransferase [Source:ZFIN;Acc:ZDB-GENE-041001-163]
49. FBXO40 FBXO40 194 1.45 - - - - - 0.707 0.743 - -
50. phldb1a ENSDARG00000061093 1637 1.45 - - - - - 0.739 0.711 - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
51. she ENSDARG00000087956 941 1.45 - 0.708 - - - - 0.742 - - Src homology 2 domain containing E [Source:ZFIN;Acc:ZDB-GENE-090915-6]
52. zgc:65895 ENSDARG00000034086 1258 1.446 - 0.715 - - - 0.731 - - - zgc:65895 [Source:ZFIN;Acc:ZDB-GENE-040426-1466]
53. rab8a ENSDARG00000067920 975 1.445 - - - - - 0.743 - - 0.702 RAB8A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-070424-36]
54. LYRM9 ENSDARG00000075528 329 1.444 - - - - - 0.731 - - 0.713 LYR motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-081022-28]
55. tmsb ENSDARG00000054911 6411 1.435 - 0.701 - - - - 0.734 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
56. tma16 ENSDARG00000008068, ENSDARG00000115226 1169 1.416 - - - - - 0.713 0.703 - - translation machinery associated 16 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-20]
57. fbxo8 ENSDARG00000007477 603 1.411 0.705 - - - - - 0.706 - - F-box protein 8 [Source:ZFIN;Acc:ZDB-GENE-060421-7091]
58. timm8b ENSDARG00000055708 7291 0.952 - - - - - - 0.952 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
59. mdh2 ENSDARG00000043371 14485 0.931 - - - - - - 0.931 - - malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
60. cct3 ENSDARG00000016173 15869 0.928 - - - - - - 0.928 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
61. ldlr ldlr 35 0.92 - - - - - - - - 0.920
62. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 0.917 - - - - - - - - 0.917 carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
63. parvb ENSDARG00000019117 1042 0.917 - - - - - - 0.917 - - parvin, beta [Source:ZFIN;Acc:ZDB-GENE-030131-4411]
64. si:ch211-202h22.10 ENSDARG00000087290 13 0.913 - - - - - - - - 0.913 si:ch211-202h22.10 [Source:ZFIN;Acc:ZDB-GENE-110914-121]
65. C5H9orf171 C5H9orf171 34 0.913 - - - - - - - - 0.913
66. CRHR2 ENSDARG00000092918, ENSDARG00000103704 12 0.913 - - - - - - - - 0.913 corticotropin releasing hormone receptor 2 [Source:NCBI gene;Acc:100002312]
67. zgc:165481 ENSDARG00000060092 95 0.913 - - - - - - - - 0.913 zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
68. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 0.912 - - - - - - - - 0.912 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
69. si:ch211-76l23.5 si:ch211-76l23.5 26 0.912 - - - - - - - - 0.912
70. ribc1 ENSDARG00000055739 32 0.912 - - - - - - - - 0.912 RIB43A domain with coiled-coils 1 [Source:ZFIN;Acc:ZDB-GENE-081031-7]
71. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 0.912 - - - - - - - - 0.912 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
72. dnajb13 ENSDARG00000043157 50 0.911 - - - - - - - - 0.911 DnaJ (Hsp40) homolog, subfamily B, member 13 [Source:ZFIN;Acc:ZDB-GENE-040910-4]
73. arl15a ENSDARG00000076040, ENSDARG00000114295 41 0.91 - - - - - - - - 0.910 ADP-ribosylation factor-like 15a [Source:ZFIN;Acc:ZDB-GENE-070209-3]
74. ccdc106 ccdc106 101 0.91 - - - - - - - - 0.910
75. elnb ENSDARG00000069017 744 0.909 - - - - - 0.909 - - - elastin b [Source:ZFIN;Acc:ZDB-GENE-061212-2]
76. gpr126 gpr126 51 0.908 - - - - - - - - 0.908
77. C5H9orf117 C5H9orf117 88 0.908 - - - - - - - - 0.908
78. ppp1r14c ENSDARG00000077341 1587 0.908 - - - - - - 0.908 - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
79. RUFY1 ENSDARG00000078685 114 0.908 - - - - - - - - 0.908 RUN and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-4]
80. si:dkey-238o14.6 si:dkey-238o14.6 42 0.907 - - - - - - - - 0.907
81. arl10 37 0.907 - - - - - - - - 0.907 ADP-ribosylation factor-like 10
82. stx11a ENSDARG00000044039 39 0.906 - - - - - - - - 0.906 syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
83. BX649554.3_1 BX649554.3_1 1071 0.906 - - - - - - - - 0.906
84. tnfaip8l2a ENSDARG00000075592 90 0.905 - - - - - - - - 0.905 tumor necrosis factor, alpha-induced protein 8-like 2a [Source:ZFIN;Acc:ZDB-GENE-060616-38]
85. URB1 ENSDARG00000060308 78 0.905 - - - - - - - - 0.905 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
86. zgc:162184 ENSDARG00000077217 47 0.904 - - - - - - - - 0.904 zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
87. ddx49 ENSDARG00000012899 1604 0.903 - - - - - - 0.903 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
88. KIF21B ENSDARG00000009733 53 0.902 - - - - - - - - 0.902 kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
89. si:ch211-89f7.1 si:ch211-89f7.1 699 0.902 - - - - - - - - 0.902
90. ccdc169 ENSDARG00000089570 101 0.902 - - - - - - - - 0.902 coiled-coil domain containing 169 [Source:ZFIN;Acc:ZDB-GENE-091204-29]
91. pipox ENSDARG00000055591 260 0.901 - - - - - - - - 0.901 pipecolic acid oxidase [Source:ZFIN;Acc:ZDB-GENE-110627-2]
92. ntmt1 ENSDARG00000022399 5779 0.9 - - - - - - 0.900 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
93. klhl23 ENSDARG00000078475 92 0.9 - - - - - - - - 0.900 kelch-like family member 23 [Source:ZFIN;Acc:ZDB-GENE-081104-458]
94. mst4 mst4 1672 0.899 - - - - - - - - 0.899
95. cacng6b ENSDARG00000046079 258 0.899 - - - - - - 0.899 - - calcium channel, voltage-dependent, gamma subunit 6b [Source:ZFIN;Acc:ZDB-GENE-100922-272]
96. QPCT ENSDARG00000089717 1383 0.897 - - - - - - - - 0.897 glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
97. pcmt ENSDARG00000015201 5132 0.897 - - - - - - 0.897 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
98. ctgfb ENSDARG00000104292 69 0.896 - - - - - - - - 0.896 connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
99. eva1bb ENSDARG00000100698 223 0.895 - - - - - - - - 0.895 eva-1 homolog Bb (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-080204-108]
100. si:rp71-1i20.2 ENSDARG00000043198 113 0.895 - - - - - - - - 0.895 si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]

There are 1612 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA