Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sox11a

Gene Name Gene ID Reads Annotation
sox11a ENSDARG00000077811 25 SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]










Genes with expression patterns similar to sox11a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sox11a ENSDARG00000077811 25 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
2. BEND2 BEND2 92 2.256 0.704 0.761 0.791 - - - - - -
3. si:ch211-219a15.3 ENSDARG00000087659 12 2 1.000 - - - - 1.000 - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
4. uts1 ENSDARG00000014927 35 2 1.000 - - - - 1.000 - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
5. cnn1a ENSDARG00000017193 6 1.947 1.000 0.947 - - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
6. cldn10l2 ENSDARG00000105042 11 1.936 - 0.936 - - - 1.000 - - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
7. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 1.936 1.000 - - - 0.936 - - - -
8. trpc2 trpc2 10 1.897 1.000 - - 0.897 - - - - -
9. BEND2_1 BEND2_1 45 1.893 1.000 0.893 - - - - - - -
10. pdk3a ENSDARG00000014527 15 1.872 - - 0.872 - - 1.000 - - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
11. KLHL29_1 KLHL29_1 158 1.87 - 1.000 - - 0.870 - - - -
12. fastkd1 ENSDARG00000056128 141 1.87 1.000 0.870 - - - - - - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
13. gas5 279 1.853 1.000 - - - - 0.853 - - - growth arrest-specific 5, transcript variant X4
14. chmp6b ENSDARG00000102024 37 1.846 - - - - 0.915 0.931 - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
15. si:dkey-233e3.1 si:dkey-233e3.1 7 1.842 - - - 0.902 - 0.940 - - -
16. nr5a1a ENSDARG00000103176 12 1.834 1.000 - - - - 0.834 - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
17. evx2 ENSDARG00000059255 317 1.816 - 1.000 - 0.816 - - - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
18. gcshb ENSDARG00000105187 182 1.811 1.000 - - - 0.811 - - - - glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
19. RIMBP2_1 RIMBP2_1 57 1.794 1.000 - - 0.794 - - - - -
20. BX927369.1 ENSDARG00000105047 21 1.793 1.000 0.793 - - - - - - -
21. RDM1 RDM1 28 1.761 - 0.947 - - - 0.814 - - -
22. DUSP23 DUSP23 121 1.759 1.000 - - - - 0.759 - - -
23. si:ch211-208f21.2 ENSDARG00000094177 61 1.754 1.000 - - - - 0.754 - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
24. si:busm1-266f07.2 ENSDARG00000031745 19 1.741 - 0.888 - - - 0.853 - - - si:busm1-266f07.2 [Source:ZFIN;Acc:ZDB-GENE-030616-436]
25. si:dkey-29d8.3 ENSDARG00000091879 21 1.732 0.732 1.000 - - - - - - - si:dkey-29d8.3 [Source:ZFIN;Acc:ZDB-GENE-070912-508]
26. CR854827.2 ENSDARG00000097227 15 1.731 - - 0.864 - - 0.867 - - -
27. shq1 ENSDARG00000058522 123 1.725 0.956 - - - 0.769 - - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:ZFIN;Acc:ZDB-GENE-070112-1412]
28. cyb5d1 ENSDARG00000056007 67 1.725 - - - - 0.820 0.905 - - - cytochrome b5 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-173]
29. si:dkey-256i11.2 ENSDARG00000093713 102 1.723 - - - - 0.900 0.823 - - - si:dkey-256i11.2 [Source:ZFIN;Acc:ZDB-GENE-110913-47]
30. lpcat2 ENSDARG00000053010 137 1.72 - 0.778 - - - 0.942 - - - lysophosphatidylcholine acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-229]
31. CR388013.3 CR388013.3 45 1.706 1.000 - - - - 0.706 - - -
32. cog1 ENSDARG00000105131 35 1.698 - 0.793 - - - 0.905 - - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
33. CABZ01069519.1 CABZ01069519.1 64 1.653 0.749 0.904 - - - - - - -
34. poc5 ENSDARG00000059982 569 1.652 0.758 - - - - 0.894 - - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
35. si:dkey-208k4.1 si:dkey-208k4.1 15 1.651 - - 0.835 - 0.816 - - - -
36. si:ch211-57i17.2 ENSDARG00000093354 58 1.648 - - - - 0.922 0.726 - - - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
37. abhd12 ENSDARG00000071004 47 1.646 - 0.888 - - - 0.758 - - - abhydrolase domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-060929-268]
38. slc51a ENSDARG00000045306 33 1.645 - 0.936 - - - - - - 0.709 solute carrier family 51, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-10]
39. antxr1a ENSDARG00000025672 32 1.639 0.732 - - - 0.907 - - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
40. cnr1 ENSDARG00000009020 33 1.629 - 0.882 - - 0.747 - - - - cannabinoid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040312-3]
41. 5S_rRNA_20 5S_rRNA_20 79 1.626 - - - - 0.903 0.723 - - -
42. C23H1orf192 C23H1orf192 60 1.624 - 0.757 - - - 0.867 - - -
43. si:ch211-155o21.4 ENSDARG00000096567 25 1.6 - 0.747 - - - 0.853 - - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
44. RETSAT ENSDARG00000070140 36 1.597 - 0.733 - - - 0.864 - - - retinol saturase [Source:HGNC Symbol;Acc:HGNC:25991]
45. BX511257.1 BX511257.1 66 1.59 0.723 - - - - 0.867 - - -
46. CU302436.1_1 ENSDARG00000114500 18 1.588 - 0.765 - - - 0.823 - - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
47. fabp11a ENSDARG00000017299 167 1.528 - 0.746 - 0.782 - - - - - fatty acid binding protein 11a [Source:ZFIN;Acc:ZDB-GENE-040912-132]
48. shox ENSDARG00000025891 338 1.51 - - - 0.748 - 0.762 - - - short stature homeobox [Source:ZFIN;Acc:ZDB-GENE-051030-21]
49. agpat9l ENSDARG00000006491, ENSDARG00000109952, ENSDARG00000112415 191 1.449 - - 0.748 - - 0.701 - - - 1-acylglycerol-3-phosphate O-acyltransferase 9, like [Source:ZFIN;Acc:ZDB-GENE-060531-19]
50. rragd ENSDARG00000006279 75 1.444 - 0.741 - - - 0.703 - - - ras-related GTP binding D [Source:ZFIN;Acc:ZDB-GENE-070620-6]
51. cpa6 ENSDARG00000012013 73 1 1.000 - - - - - - - - carboxypeptidase A6 [Source:ZFIN;Acc:ZDB-GENE-091204-331]
52. ggcta ENSDARG00000076406 33 1 1.000 - - - - - - - - gamma-glutamylcyclotransferase a [Source:ZFIN;Acc:ZDB-GENE-081104-129]
53. lifra ENSDARG00000098857 11 1 1.000 - - - - - - - - leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
54. MFAP4_6 MFAP4_6 162 1 - 1.000 - - - - - - -
55. si:dkey-188i13.10 ENSDARG00000075151 22 1 - 1.000 - - - - - - - si:dkey-188i13.10 [Source:ZFIN;Acc:ZDB-GENE-090313-208]
56. pnp4b ENSDARG00000029230 6 1 1.000 - - - - - - - - purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
57. si:dkeyp-69e1.8 ENSDARG00000055731 35 1 1.000 - - - - - - - - si:dkeyp-69e1.8 [Source:ZFIN;Acc:ZDB-GENE-070912-676]
58. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 1 1.000 - - - - - - - - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
59. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 1.000 - - - - - - - -
60. si:dkeyp-27e10.7 si:dkeyp-27e10.7 5 1 - 1.000 - - - - - - -
61. irf8 ENSDARG00000056407 85 1 - 1.000 - - - - - - - interferon regulatory factor 8 [Source:ZFIN;Acc:ZDB-GENE-040718-367]
62. opcml ENSDARG00000013005 18 1 1.000 - - - - - - - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
63. BX284672.1 BX284672.1 11 1 - - - - - 1.000 - - -
64. si:rp71-26b20.1 si:rp71-26b20.1 11 1 - 1.000 - - - - - - -
65. wbscr27 wbscr27 70 1 1.000 - - - - - - - -
66. CABZ01086354.1_1 CABZ01086354.1_1 89 1 1.000 - - - - - - - -
67. CR936465.1 CR936465.1 7 1 1.000 - - - - - - - -
68. TRIM14_10 TRIM14_10 9 1 1.000 - - - - - - - -
69. BX323793.3 BX323793.3 7 1 - - - - - 1.000 - - -
70. rgs7bpb ENSDARG00000016742, ENSDARG00000117059 87 1 1.000 - - - - - - - - regulator of G protein signaling 7 binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-9502]
71. rxfp3.2a 11 1 - 1.000 - - - - - - - relaxin/insulin-like family peptide receptor 3.2a
72. POGK POGK 1 1 - - - - - 1.000 - - -
73. ptx3a ENSDARG00000068275 589 1 1.000 - - - - - - - - pentraxin 3, long a [Source:ZFIN;Acc:ZDB-GENE-030131-8720]
74. gp1bb ENSDARG00000074441 116 1 - - - - - 1.000 - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
75. lonrf1 ENSDARG00000075048 13 1 1.000 - - - - - - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
76. zgc:158446 36 1 - 1.000 - - - - - - - zgc:158446
77. otx5 ENSDARG00000043483 282 1 1.000 - - - - - - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
78. si:ch211-225b11.4 ENSDARG00000093563 42 1 1.000 - - - - - - - - si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
79. NMI 3 1 - - - - - 1.000 - - - N-myc (and STAT) interactor
80. zgc:153151 ENSDARG00000069563 126 1 1.000 - - - - - - - - zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
81. C25HXorf38_1 C25HXorf38_1 35 1 1.000 - - - - - - - -
82. scospondin ENSDARG00000067859 4 1 1.000 - - - - - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
83. TMEM245 ENSDARG00000070455 85 1 1.000 - - - - - - - - transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
84. NAT14 ENSDARG00000115349 21 1 - - - - - 1.000 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
85. foxl2 61 1 1.000 - - - - - - - - forkhead box L2, transcript variant X1
86. vwc2 ENSDARG00000076495 22 1 1.000 - - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
87. ABCC3 ENSDARG00000096662 15 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-16]
88. CR356223.6 CR356223.6 4 1 - 1.000 - - - - - - -
89. sema6e ENSDARG00000000189 35 1 - 1.000 - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
90. BICD1 BICD1 9 1 - - - - - 1.000 - - -
91. HMGXB3 ENSDARG00000077823 2 1 - - - - - 1.000 - - - HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
92. si:dkey-199m13.9 si:dkey-199m13.9 20 1 - 1.000 - - - - - - -
93. syce2 ENSDARG00000103187 12 1 1.000 - - - - - - - - synaptonemal complex central element protein 2 [Source:ZFIN;Acc:ZDB-GENE-050512-1]
94. zgc:113397 zgc:113397 60 1 1.000 - - - - - - - -
95. gpr88 24 1 1.000 - - - - - - - - G protein-coupled receptor 88
96. sdr42e1 ENSDARG00000098838 25 1 1.000 - - - - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
97. mir124-1 10 1 1.000 - - - - - - - - microRNA 124-1
98. ripply2 ENSDARG00000070535 18 1 - - - - - 1.000 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
99. EVI5L ENSDARG00000052766 8 1 1.000 - - - - - - - - ecotropic viral integration site 5 like [Source:HGNC Symbol;Acc:HGNC:30464]
100. ZNF337_10 ZNF337_10 183 1 1.000 - - - - - - - -

There are 1119 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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