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Results for mir124-1

Gene Name Gene ID Reads Annotation
mir124-1 10 microRNA 124-1










Genes with expression patterns similar to mir124-1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir124-1 10 7 1.000 - 1.000 1.000 1.000 1.000 - 1.000 1.000 microRNA 124-1
2. 5S_rRNA_19 5S_rRNA_19 1 2 - - 1.000 - - 1.000 - - -
3. si:ch211-202m22.1 ENSDARG00000094491 24 2 1.000 - 1.000 - - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
4. CABZ01090303.1 CABZ01090303.1 2 2 1.000 - - - - 1.000 - - -
5. si:dkey-148a12.2 si:dkey-148a12.2 1 2 1.000 - 1.000 - - - - - -
6. si:rp71-7l19.7 si:rp71-7l19.7 1 2 - - 1.000 - - 1.000 - - -
7. si:ch211-285c6.2 ENSDARG00000079234 1 2 - - 1.000 - - 1.000 - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
8. si:dkey-57a22.12 si:dkey-57a22.12 23 2 1.000 - - - - 1.000 - - -
9. cxxc4 ENSDARG00000077817 197 1.992 1.000 - - - - 0.992 - - - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
10. USF2 ENSDARG00000020228 3 1.928 - - - - - 1.000 - - 0.928 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
11. QDPR QDPR 11 1.928 1.000 - - - - - - - 0.928
12. vip ENSDARG00000078247 10 1.914 - - - - - 1.000 - - 0.914 vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
13. si:ch1073-39g8.1 si:ch1073-39g8.1 7 1.908 1.000 - - - - - - - 0.908
14. si:dkey-164k14.1 si:dkey-164k14.1 5 1.889 - - 1.000 - - - - - 0.889
15. gnai3 ENSDARG00000030644 29 1.871 1.000 - - - - 0.871 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
16. opcml ENSDARG00000013005 18 1.849 1.000 - - - - 0.849 - - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
17. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.83 - - - - - 1.000 - - 0.830 sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
18. scospondin ENSDARG00000067859 4 1.822 1.000 - - 0.822 - - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
19. panx2 ENSDARG00000063019 3 1.822 - - - 0.822 - 1.000 - - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
20. VDAC3 ENSDARG00000003695 34 1.822 1.000 - - 0.822 - - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
21. MAP3K13 ENSDARG00000009493 8 1.805 - - 0.855 - - 0.950 - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
22. si:ch211-187f22.2 si:ch211-187f22.2 7 1.797 1.000 - - 0.797 - - - - -
23. si:dkey-97l20.5 si:dkey-97l20.5 33 1.764 - - - - 0.764 1.000 - - -
24. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1.758 0.758 - - - - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
25. NXPH4 11 1.75 - - - 0.822 - - - - 0.928 neurexophilin 4
26. si:ch211-268b13.3 si:ch211-268b13.3 28 1.726 1.000 - - - - 0.726 - - -
27. si:rp71-1f1.4 ENSDARG00000092476 11 1.725 1.000 - - - - 0.725 - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
28. exoc4 ENSDARG00000004336 32 1.72 1.000 - - - - - - - 0.720 exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
29. MFAP4_4 MFAP4_4 9 1.702 - - 0.702 - - 1.000 - - -
30. zgc:162322 zgc:162322 1 1.702 - - 1.000 - - - - - 0.702
31. si:dkey-20j3.4 si:dkey-20j3.4 4 1.679 - - - - - - - 0.762 0.917
32. si:ch211-10a23.2 ENSDARG00000060656 471 1.532 0.797 - - - - 0.735 - - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
33. ppfia4 ENSDARG00000053205 276 1.456 0.743 - - - - - - 0.713 - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070720-14]
34. stc1l ENSDARG00000058476 512 1.448 - - - - 0.705 - - 0.743 - stanniocalcin 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-1521]
35. PSKH2 PSKH2 1 1 - - 1.000 - - - - - -
36. foxl2 61 1 1.000 - - - - - - - - forkhead box L2, transcript variant X1
37. UIMC1 200 1 - - - - - 1.000 - - - ubiquitin interaction motif containing 1
38. gltpb ENSDARG00000077962 5 1 - - - - - 1.000 - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
39. vwc2 ENSDARG00000076495 22 1 1.000 - - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
40. si:ch211-276k2.2 4 1 - - 1.000 - - - - - - si:ch211-276k2.2
41. efr3ba ENSDARG00000033516 19 1 - - - - - 1.000 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
42. si:dkeyp-28d2.4 ENSDARG00000041828 0 1 - - - - - 1.000 - - - si:dkeyp-28d2.4 [Source:ZFIN;Acc:ZDB-GENE-091204-68]
43. ANO2 ENSDARG00000101363 1 1 - - 1.000 - - - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
44. asb13a.2 ENSDARG00000045765, ENSDARG00000109879 8 1 - - 1.000 - - - - - - ankyrin repeat and SOCS box containing 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041210-88]
45. lonrf1 ENSDARG00000075048 13 1 1.000 - - - - - - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
46. zgc:153151 ENSDARG00000069563 126 1 1.000 - - - - - - - - zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
47. C25HXorf38_1 C25HXorf38_1 35 1 1.000 - - - - - - - -
48. rbfox3l rbfox3l 34 1 - - - - - 1.000 - - -
49. si:ch211-225b11.4 ENSDARG00000093563 42 1 1.000 - - - - - - - - si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
50. otx5 ENSDARG00000043483 282 1 1.000 - - - - - - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
51. TMEM245 ENSDARG00000070455 85 1 1.000 - - - - - - - - transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
52. si:dkey-253d23.8 ENSDARG00000094427 26 1 - - - - - 1.000 - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
53. sez6a ENSDARG00000100876 35 1 - - 1.000 - - - - - - seizure related 6 homolog a [Source:ZFIN;Acc:ZDB-GENE-030131-8208]
54. PEG3_14 PEG3_14 2 1 - - 1.000 - - - - - -
55. si:dkeyp-11g8.3 si:dkeyp-11g8.3 20 1 - - 1.000 - - - - - -
56. wbscr27 wbscr27 70 1 1.000 - - - - - - - -
57. mstnb ENSDARG00000069133 3 1 - - - - - 1.000 - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
58. rgs7bpb ENSDARG00000016742, ENSDARG00000117059 87 1 1.000 - - - - - - - - regulator of G protein signaling 7 binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-9502]
59. smad9 368 1 - - - - - 1.000 - - - SMAD family member 9, transcript variant X1
60. CR936465.1 CR936465.1 7 1 1.000 - - - - - - - -
61. CABZ01086354.1_1 CABZ01086354.1_1 89 1 1.000 - - - - - - - -
62. TRIM14_10 TRIM14_10 9 1 1.000 - - - - - - - -
63. ptx3a ENSDARG00000068275 589 1 1.000 - - - - - - - - pentraxin 3, long a [Source:ZFIN;Acc:ZDB-GENE-030131-8720]
64. FP340264.1 FP340264.1 0 1 - - 1.000 - - - - - -
65. ggcta ENSDARG00000076406 33 1 1.000 - - - - - - - - gamma-glutamylcyclotransferase a [Source:ZFIN;Acc:ZDB-GENE-081104-129]
66. lifra ENSDARG00000098857 11 1 1.000 - - - - - - - - leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
67. cpa6 ENSDARG00000012013 73 1 1.000 - - - - - - - - carboxypeptidase A6 [Source:ZFIN;Acc:ZDB-GENE-091204-331]
68. si:dkeyp-69e1.8 ENSDARG00000055731 35 1 1.000 - - - - - - - - si:dkeyp-69e1.8 [Source:ZFIN;Acc:ZDB-GENE-070912-676]
69. pnp4b ENSDARG00000029230 6 1 1.000 - - - - - - - - purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
70. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 1 1.000 - - - - - - - - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
71. trpc2 trpc2 10 1 1.000 - - - - - - - -
72. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 1.000 - - - - - - - -
73. apba1a ENSDARG00000103848 0 1 - - 1.000 - - - - - - amyloid beta (A4) precursor protein-binding, family A, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-175]
74. BEGAIN_1 BEGAIN_1 7 1 - - 1.000 - - - - - -
75. si:dkeyp-117h8.10 si:dkeyp-117h8.10 16 1 - - 1.000 - - - - - -
76. SCARB2 SCARB2 24 1 1.000 - - - - - - - -
77. tekt1 ENSDARG00000101331 27 1 1.000 - - - - - - - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]
78. si:ch211-202h22.10 ENSDARG00000087290 13 1 - - - - - 1.000 - - - si:ch211-202h22.10 [Source:ZFIN;Acc:ZDB-GENE-110914-121]
79. abcd1 ENSDARG00000074876 6 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
80. si:ch211-201b11.3 si:ch211-201b11.3 2 1 - - 1.000 - - - - - -
81. zgc:92275 ENSDARG00000034048 9 1 1.000 - - - - - - - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
82. tdrd1 ENSDARG00000007465, ENSDARG00000109298 17 1 1.000 - - - - - - - - tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070803-1]
83. Mar-01 Mar-01 176 1 1.000 - - - - - - - -
84. MPP4 MPP4 1 1 1.000 - - - - - - - -
85. dre-mir-196c dre-mir-196c 2 1 - - - - - 1.000 - - -
86. mir150 ENSDARG00000081593 4 1 - - 1.000 - - - - - - microRNA 150 [Source:NCBI gene;Acc:100033674]
87. mir138 19 1 1.000 - - - - - - - - microRNA 138
88. CABZ01070631.1 ENSDARG00000110183 6 1 1.000 - - - - - - - - F-BAR and double SH3 domains protein 2-like [Source:NCBI gene;Acc:100537850]
89. CABZ01061873.1 CABZ01061873.1 51 1 - - - - - 1.000 - - -
90. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 1.000 - - - - - - - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
91. zfpm2a ENSDARG00000040123 46 1 1.000 - - - - - - - - zinc finger protein, FOG family member 2a [Source:ZFIN;Acc:ZDB-GENE-060130-4]
92. C6H3orf18 C6H3orf18 7 1 - - - - - 1.000 - - -
93. nog3 ENSDARG00000053528, ENSDARG00000116141, ENSDARG00000116361 1 1 - - 1.000 - - - - - - noggin 3 [Source:ZFIN;Acc:ZDB-GENE-990714-8]
94. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 1.000 - - - - - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
95. plekha7b ENSDARG00000062220, ENSDARG00000110462 11 1 - - 1.000 - - - - - - pleckstrin homology domain containing, family A member 7b [Source:ZFIN;Acc:ZDB-GENE-091014-2]
96. BX119910.13 BX119910.13 4 1 - - 1.000 - - - - - -
97. CR548630.2 CR548630.2 1 1 - - 1.000 - - - - - -
98. wisp1b ENSDARG00000076685 38 1 1.000 - - - - - - - - WNT1 inducible signaling pathway protein 1b [Source:ZFIN;Acc:ZDB-GENE-080220-16]
99. iffo2a ENSDARG00000062101, ENSDARG00000111078 0 1 - - 1.000 - - - - - - intermediate filament family orphan 2a [Source:ZFIN;Acc:ZDB-GENE-090313-342]
100. kcnk10b ENSDARG00000045956 43 1 1.000 - - - - - - - - potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]

There are 817 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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