Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for socs1a

Gene Name Gene ID Reads Annotation
socs1a ENSDARG00000038095 20 suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]










Genes with expression patterns similar to socs1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. socs1a ENSDARG00000038095 20 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
2. zgc:173716 9 2.459 - - 0.735 0.724 - - 1.000 - - zgc:173716
3. RECK ENSDARG00000090039 15 2 - - 1.000 - - - 1.000 - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
4. mir30b 4 2 1.000 - - - 1.000 - - - - microRNA 30b
5. AL929092.1_1 ENSDARG00000092217 3 2 - - 1.000 - 1.000 - - - -
6. FP103003.1_1 FP103003.1_1 6 2 1.000 - - - 1.000 - - - -
7. zgc:194189 ENSDARG00000008010 26 2 - - - - 1.000 - 1.000 - - zgc:194189 [Source:ZFIN;Acc:ZDB-GENE-081022-71]
8. ft2 ENSDARG00000109567 5 2 1.000 - - - 1.000 - - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
9. SLC22A14 SLC22A14 24 2 1.000 - 1.000 - - - - - -
10. 5S_rRNA_1 5S_rRNA_1 5 1.941 0.941 - - - 1.000 - - - -
11. VSIG10L ENSDARG00000089237 12 1.905 0.905 - - - 1.000 - - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
12. ebf1b ENSDARG00000069196 64 1.893 - - - - - 0.893 1.000 - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
13. si:ch211-161m3.4 ENSDARG00000103375 10 1.798 - - - - 1.000 0.798 - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
14. FAM188B2 4 1.798 - - - - 1.000 0.798 - - - family with sequence similarity 188, member B2
15. VASH1 ENSDARG00000092716 33 1.798 - - - - 1.000 0.798 - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
16. guca1a ENSDARG00000010454 9 1.771 - - - 0.771 1.000 - - - - guanylate cyclase activator 1A [Source:ZFIN;Acc:ZDB-GENE-011128-5]
17. ftr43 ENSDARG00000076106 2 1.735 - - 0.735 - 1.000 - - - - finTRIM family, member 43 [Source:ZFIN;Acc:ZDB-GENE-090507-8]
18. si:dkeyp-73d8.8 ENSDARG00000094045 17 1.735 1.000 - 0.735 - - - - - - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
19. fam219b ENSDARG00000104637 3 1.735 - - 0.735 - 1.000 - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
20. si:ch211-15j21.2 si:ch211-15j21.2 13 1.722 - - 1.000 - - - 0.722 - -
21. BX005256.5 BX005256.5 25 1.719 - - - - 1.000 - 0.719 - -
22. desi1a ENSDARG00000033140 92 1.709 0.845 - - - - 0.864 - - - desumoylating isopeptidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1657]
23. DXO ENSDARG00000036852 16 1.701 - - 1.000 0.701 - - - - - decapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]
24. zgc:173713 17 1.694 0.896 - - - - 0.798 - - - zgc:173713, transcript variant X2
25. si:dkey-182g1.5 si:dkey-182g1.5 22 1.623 0.825 - - - - 0.798 - - -
26. CR848746.2 CR848746.2 69 1.588 0.825 - - - - 0.763 - - -
27. CENPA 63 1.572 0.774 - - - - 0.798 - - - histone H3-like centromeric protein A
28. ppp1r3db ENSDARG00000076248 32 1.566 - - - - - 0.798 0.768 - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
29. zgc:113276 ENSDARG00000056650 218 1.535 - - - - - 0.782 0.753 - - zgc:113276 [Source:ZFIN;Acc:ZDB-GENE-050522-7]
30. trmt1 ENSDARG00000010978 72 1.522 0.799 - - - - 0.723 - - - tRNA methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060810-40]
31. wdr65 wdr65 251 1.489 0.735 - - 0.754 - - - - -
32. GPR97_1 GPR97_1 2 1 - - - - - - 1.000 - -
33. si:dkey-14a7.4 si:dkey-14a7.4 5 1 - - - - 1.000 - - - -
34. EGFR_1 EGFR_1 2 1 - - - - - - 1.000 - -
35. snx33 ENSDARG00000014954 45 1 - - - - - - 1.000 - - sorting nexin 33 [Source:ZFIN;Acc:ZDB-GENE-041111-209]
36. guca1c ENSDARG00000030758 9 1 - - 1.000 - - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
37. SHISA7 SHISA7 1 1 - - - - 1.000 - - - -
38. dao.2 ENSDARG00000035603 8 1 - - - - 1.000 - - - - D-amino-acid oxidase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2634]
39. si:dkey-11f4.14 ENSDARG00000098461 35 1 - - - - 1.000 - - - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
40. PLB1 PLB1 20 1 1.000 - - - - - - - -
41. si:dkey-4c15.9 ENSDARG00000092152 1 1 - - - - 1.000 - - - - si:dkey-4c15.9 [Source:ZFIN;Acc:ZDB-GENE-050420-80]
42. znf536 ENSDARG00000103648 6 1 - - - - 1.000 - - - - zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
43. si:ch211-100p3.1 si:ch211-100p3.1 1 1 - - 1.000 - - - - - -
44. BX324198.1 BX324198.1 12 1 - - - - 1.000 - - - -
45. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - - 1.000 - - - - - -
46. lamb1a_1 ENSDARG00000101209 13 1 1.000 - - - - - - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
47. rasal3 ENSDARG00000089933 17 1 1.000 - - - - - - - - RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
48. si:ch211-1f22.17 si:ch211-1f22.17 10 1 - - - - - - 1.000 - -
49. U1_51 U1_51 0 1 - - 1.000 - - - - - -
50. taf4b ENSDARG00000075732 3 1 - - - - 1.000 - - - - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
51. C24H7orf10_1 C24H7orf10_1 0 1 - - - - 1.000 - - - -
52. kcnh8 ENSDARG00000062640 10 1 - - 1.000 - - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-204]
53. C11H1orf116 C11H1orf116 9 1 1.000 - - - - - - - -
54. ZCCHC6 2 1 - - - - 1.000 - - - - zinc finger, CCHC domain containing 6
55. si:ch211-250n8.1 ENSDARG00000088736 4 1 - - - - - - 1.000 - - si:ch211-250n8.1 [Source:ZFIN;Acc:ZDB-GENE-130603-2]
56. si:dkey-155d18.1 1 1 - - - - 1.000 - - - - si:dkey-155d18.1
57. CR790363.3 CR790363.3 5 1 - - 1.000 - - - - - -
58. si:ch211-11i5.3 si:ch211-11i5.3 7 1 - - 1.000 - - - - - -
59. si:ch73-383o19.2 si:ch73-383o19.2 3 1 - - 1.000 - - - - - -
60. ZNF337_14 ZNF337_14 4 1 - - - - 1.000 - - - -
61. si:ch211-210g13.5 ENSDARG00000062575 1 1 - - - - 1.000 - - - - si:ch211-210g13.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5675]
62. si:ch211-196c10.13 ENSDARG00000096756 28 1 1.000 - - - - - - - - si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
63. csrnp1b ENSDARG00000038429 10 1 - - - - 1.000 - - - - cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
64. U6_7 U6_7 0 1 - - - - 1.000 - - - -
65. fam166b ENSDARG00000100292 14 1 1.000 - - - - - - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
66. usp53b ENSDARG00000076499 16 1 - - - - - - 1.000 - - ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
67. ifnphi3 ENSDARG00000070676 7 1 - - 1.000 - - - - - - interferon phi 3 [Source:ZFIN;Acc:ZDB-GENE-071128-2]
68. stk33 ENSDARG00000054318, ENSDARG00000114909 34 1 1.000 - - - - - - - - serine/threonine kinase 33 [Source:ZFIN;Acc:ZDB-GENE-040724-242]
69. GPRIN1 10 1 - - - - - - 1.000 - - G protein regulated inducer of neurite outgrowth 1
70. MCC ENSDARG00000105237 4 1 - - 1.000 - - - - - - MCC, WNT signaling pathway regulator [Source:ZFIN;Acc:ZDB-GENE-141210-1]
71. il2rgb ENSDARG00000053702 0 1 - - 1.000 - - - - - - interleukin 2 receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-080402-2]
72. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 1 1.000 - - - - - - - - nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
73. flnb ENSDARG00000092281 10 1 - - - - - - 1.000 - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
74. ENSDARG00000089152 ENSDARG00000089152 12 1 1.000 - - - - - - - -
75. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 1 - - 1.000 - - - - - - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
76. ZBED1_5 ZBED1_5 1 1 - - 1.000 - - - - - -
77. CABZ01090980.1 CABZ01090980.1 6 1 - - - - 1.000 - - - -
78. gpr155a ENSDARG00000090804 27 1 - - - - - - 1.000 - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
79. si:ch211-152f22.2 si:ch211-152f22.2 0 1 - - 1.000 - - - - - -
80. CMTM8 CMTM8 71 1 - - - - - - 1.000 - -
81. viml ENSDARG00000044501 5 1 - - 1.000 - - - - - - vimentin like [Source:ZFIN;Acc:ZDB-GENE-040426-1743]
82. si:dkey-21n8.3 si:dkey-21n8.3 5 1 - - - - - - 1.000 - -
83. KAZN_1 KAZN_1 13 1 - - - - - - 1.000 - -
84. paplnb ENSDARG00000042186 18 1 - - - - - - 1.000 - - papilin b, proteoglycan-like sulfated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-6023]
85. agbl5 ENSDARG00000045900 2 1 - - 1.000 - - - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
86. alg13 ENSDARG00000054374 2 1 - - - - - - 1.000 - - ALG13, UDP-N-acetylglucosaminyltransferase subunit [Source:ZFIN;Acc:ZDB-GENE-060307-1]
87. si:busm1-180g5.7_1 si:busm1-180g5.7_1 0 1 - - 1.000 - - - - - -
88. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1 - - - - 1.000 - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
89. GPX2 ENSDARG00000089149 10 1 - - - - 1.000 - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
90. KLHDC3 ENSDARG00000102772 14 1 - - - - - - 1.000 - - kelch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2426]
91. otx1a 1607 1 1.000 - - - - - - - - orthodenticle homeobox 1a
92. setd1bb ENSDARG00000077244 34 1 - - - - - - 1.000 - - SET domain containing 1B, b [Source:ZFIN;Acc:ZDB-GENE-080522-1]
93. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - 1.000 - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
94. foxa_1 ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 1 1 - - - - 1.000 - - - - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
95. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - 1.000 - - - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
96. RBM11 ENSDARG00000090202 15 1 - - - - 1.000 - - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
97. si:ch211-203l7.3 si:ch211-203l7.3 0 1 - - - - - - 1.000 - -
98. si:ch211-131e11.20 si:ch211-131e11.20 0 1 - - 1.000 - - - - - -
99. pcolce2b ENSDARG00000055575 2 1 1.000 - - - - - - - - procollagen C-endopeptidase enhancer 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1177]
100. otogl ENSDARG00000088750 2 1 - - - - 1.000 - - - - otogelin-like [Source:ZFIN;Acc:ZDB-GENE-050419-93]

There are 1011 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA