Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snx21

Gene Name Gene ID Reads Annotation
snx21 ENSDARG00000062770, ENSDARG00000111065 9 sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]










Genes with expression patterns similar to snx21

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snx21 ENSDARG00000062770, ENSDARG00000111065 9 7 1.000 - 1.000 1.000 - 1.000 1.000 1.000 1.000 sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
2. ela3l ENSDARG00000007276 11 2 - - - - - 1.000 1.000 - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
3. trhra ENSDARG00000076546 3 1.962 - - 0.962 - - 1.000 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
4. CABZ01069022.1 ENSDARG00000105692 16 1.925 - - 0.925 - - - 1.000 - - si:cabz01069022.1 [Source:NCBI gene;Acc:100332864]
5. USF2 ENSDARG00000020228 3 1.897 - - - - - 1.000 - - 0.897 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
6. vip ENSDARG00000078247 10 1.883 - - - - - 1.000 - - 0.883 vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
7. ATXN1 ATXN1 12 1.872 0.910 - 0.962 - - - - - -
8. si:ch73-138e16.2 ENSDARG00000104894 1 1.871 - - - - - - 1.000 0.871 - si:ch73-138e16.2 [Source:ZFIN;Acc:ZDB-GENE-070705-201]
9. si:ch211-195i24.1 si:ch211-195i24.1 10 1.869 1.000 - - - - - - - 0.869
10. cacna2d2 cacna2d2 16 1.855 - - 0.855 - - - 1.000 - -
11. pak1 ENSDARG00000103959 32 1.853 0.853 - - - - - 1.000 - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
12. mir124-1 10 1.83 - - - - - 1.000 - - 0.830 microRNA 124-1
13. si:dkey-30j19.3 si:dkey-30j19.3 3 1.768 - - - - - - - 0.871 0.897
14. DUSP13_1 DUSP13_1 425 1.768 1.000 - 0.768 - - - - - -
15. si:ch211-259i2.2 si:ch211-259i2.2 45 1.758 0.796 - 0.962 - - - - - -
16. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1.756 - - - - - 0.956 0.800 - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
17. tmem44 ENSDARG00000068193 8 1.751 - - 0.962 - - - - - 0.789 transmembrane protein 44 [Source:ZFIN;Acc:ZDB-GENE-060825-65]
18. carm1l ENSDARG00000091531 13 1.746 1.000 - - - - - 0.746 - - coactivator-associated arginine methyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-090312-219]
19. pax2b ENSDARG00000032578 12 1.74 - - 0.904 - - - 0.836 - - paired box 2b [Source:ZFIN;Acc:ZDB-GENE-001030-4]
20. si:dkey-97l20.5 si:dkey-97l20.5 33 1.732 0.732 - - - - 1.000 - - -
21. wnt11 ENSDARG00000004256, ENSDARG00000115343 331 1.662 0.883 - - - - - 0.779 - - wingless-type MMTV integration site family, member 11 [Source:ZFIN;Acc:ZDB-GENE-990603-12]
22. tp73 ENSDARG00000017953 6 1.653 - - 0.756 - - - - - 0.897 tumor protein p73 [Source:ZFIN;Acc:ZDB-GENE-030814-2]
23. si:ch211-42i9.5 si:ch211-42i9.5 21 1.64 - - 0.791 - - 0.849 - - -
24. tnmd ENSDARG00000052615 42 1.626 0.751 - 0.875 - - - - - - tenomodulin [Source:ZFIN;Acc:ZDB-GENE-080220-31]
25. si:dkey-72l14.3 ENSDARG00000061044 59 1.596 - - 0.810 - - - - 0.786 - si:dkey-72l14.3 [Source:ZFIN;Acc:ZDB-GENE-060526-332]
26. si:dkey-269i1.4 ENSDARG00000095744, ENSDARG00000100833 1945 1.471 - - - - - - - 0.709 0.762 si:dkey-269i1.4 [Source:ZFIN;Acc:ZDB-GENE-121214-37]
27. zgc:174153 ENSDARG00000079376 12007 1.44 - - - - - - - 0.737 0.703 zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
28. si:ch211-268b13.3 si:ch211-268b13.3 28 1.431 - - - - - 0.726 0.705 - -
29. SGCZ ENSDARG00000106258 2 1 - - - - - - 1.000 - - sarcoglycan zeta [Source:HGNC Symbol;Acc:HGNC:14075]
30. elovl2 ENSDARG00000045414 119 1 - - - - - - 1.000 - - ELOVL fatty acid elongase 2 [Source:ZFIN;Acc:ZDB-GENE-060421-5612]
31. C25H19orf40 C25H19orf40 17 1 1.000 - - - - - - - -
32. MSH4 ENSDARG00000075826 37 1 1.000 - - - - - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
33. CU633479.6 ENSDARG00000116146 4 1 1.000 - - - - - - - -
34. CR387932.1 ENSDARG00000097344 2 1 1.000 - - - - - - - -
35. aven ENSDARG00000002894 49 1 1.000 - - - - - - - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
36. si:dkey-253d23.8 ENSDARG00000094427 26 1 - - - - - 1.000 - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
37. zgc:194275 ENSDARG00000074014 130 1 1.000 - - - - - - - - zgc:194275 [Source:ZFIN;Acc:ZDB-GENE-081022-92]
38. figf 48 1 - - - - - - 1.000 - - c-fos induced growth factor, transcript variant X2
39. rbfox3l rbfox3l 34 1 - - - - - 1.000 - - -
40. si:ch211-80h18.1 ENSDARG00000078522 1941 1 1.000 - - - - - - - - si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
41. gltpb ENSDARG00000077962 5 1 - - - - - 1.000 - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
42. CR936371.2 ENSDARG00000117302 2 1 1.000 - - - - - - - -
43. UIMC1 200 1 - - - - - 1.000 - - - ubiquitin interaction motif containing 1
44. hepacam 73 1 - - - - - - 1.000 - - hepatic and glial cell adhesion molecule, transcript variant X2
45. tbx6 ENSDARG00000011785 132 1 - - - - - - 1.000 - - T-box 6 [Source:ZFIN;Acc:ZDB-GENE-020416-5]
46. si:dkey-167k11.3 si:dkey-167k11.3 3 1 1.000 - - - - - - - -
47. si:dkeyp-28d2.4 ENSDARG00000041828 0 1 - - - - - 1.000 - - - si:dkeyp-28d2.4 [Source:ZFIN;Acc:ZDB-GENE-091204-68]
48. efr3ba ENSDARG00000033516 19 1 - - - - - 1.000 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
49. nts ENSDARG00000057887 5 1 - - - - - - 1.000 - - neurotensin [Source:ZFIN;Acc:ZDB-GENE-091204-433]
50. rictora ENSDARG00000100867 20 1 1.000 - - - - - - - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
51. PAMR1 ENSDARG00000093480 40 1 - - - - - - 1.000 - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
52. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 1 - - - - - - 1.000 - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
53. CT573256.1 ENSDARG00000091657 18 1 - - - - - - 1.000 - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
54. SLC9A3R2_1 SLC9A3R2_1 28 1 1.000 - - - - - - - -
55. gadd45aa ENSDARG00000043581 114 1 1.000 - - - - - - - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
56. cep41 ENSDARG00000038500, ENSDARG00000117114 4 1 1.000 - - - - - - - - centrosomal protein 41 [Source:ZFIN;Acc:ZDB-GENE-040704-35]
57. echdc1 68 1 1.000 - - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
58. prkab1a ENSDARG00000044183 264 1 1.000 - - - - - - - - protein kinase, AMP-activated, beta 1 non-catalytic subunit, a [Source:ZFIN;Acc:ZDB-GENE-040718-377]
59. SLITRK1 2 1 - - - - - - 1.000 - - SLIT and NTRK like family member 1
60. VPS13B VPS13B 1 1 1.000 - - - - - - - -
61. gsc ENSDARG00000059073, ENSDARG00000111184, ENSDARG00000115937 152 1 1.000 - - - - - - - - goosecoid [Source:ZFIN;Acc:ZDB-GENE-980528-2060]
62. KCNK7 ENSDARG00000057331 5 1 1.000 - - - - - - - - potassium channel, subfamily K, member 7 [Source:ZFIN;Acc:ZDB-GENE-110304-2]
63. ptpn6_1 ENSDARG00000089043 22 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
64. lgi1b ENSDARG00000058421 12 1 1.000 - - - - - - - - leucine-rich, glioma inactivated 1b [Source:ZFIN;Acc:ZDB-GENE-060217-1]
65. mstnb ENSDARG00000069133 3 1 - - - - - 1.000 - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
66. panx2 ENSDARG00000063019 3 1 - - - - - 1.000 - - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
67. smad9 368 1 - - - - - 1.000 - - - SMAD family member 9, transcript variant X1
68. grapb ENSDARG00000022668 6 1 1.000 - - - - - - - - GRB2 related adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-050913-4]
69. C6H3orf18 C6H3orf18 7 1 - - - - - 1.000 - - -
70. CABZ01061873.1 CABZ01061873.1 51 1 - - - - - 1.000 - - -
71. BX897714.3 BX897714.3 3 1 1.000 - - - - - - - -
72. si:ch211-202n12.5 si:ch211-202n12.5 19 1 1.000 - - - - - - - -
73. C17orf105 C17orf105 1 1 - - - - - - 1.000 - -
74. tceb3 40 1 1.000 - - - - - - - - transcription elongation factor B (SIII), polypeptide 3
75. abcd1 ENSDARG00000074876 6 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
76. MFAP4 ENSDARG00000090783 8 1 - - - - - - 1.000 - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
77. si:ch211-202h22.10 ENSDARG00000087290 13 1 - - - - - 1.000 - - - si:ch211-202h22.10 [Source:ZFIN;Acc:ZDB-GENE-110914-121]
78. CABZ01072557.1 CABZ01072557.1 9 1 1.000 - - - - - - - -
79. GLIPR1 GLIPR1 37 1 1.000 - - - - - - - -
80. si:dkey-179o14.4 si:dkey-179o14.4 2 1 1.000 - - - - - - - -
81. 5S_rRNA_19 5S_rRNA_19 1 1 - - - - - 1.000 - - -
82. GPR137B_1 GPR137B_1 8 1 1.000 - - - - - - - -
83. dre-mir-196c dre-mir-196c 2 1 - - - - - 1.000 - - -
84. ZBTB42 ENSDARG00000102761 2 1 1.000 - - - - - - - - zinc finger and BTB domain containing 42 [Source:ZFIN;Acc:ZDB-GENE-130730-2]
85. si:dkey-264b2.3 19 1 - - - - - - 1.000 - - si:dkey-264b2.3, transcript variant X2
86. si:dkey-31f5.8 ENSDARG00000094428 2 1 - - - - - - 1.000 - - si:dkey-31f5.8 [Source:ZFIN;Acc:ZDB-GENE-041210-182]
87. TENM2 ENSDARG00000037122 48 1 - - - - - 1.000 - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
88. cabp2b ENSDARG00000052277 119 1 - - - - - 1.000 - - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
89. si:dkey-241l7.10 si:dkey-241l7.10 38 1 - - - - - - 1.000 - -
90. snx18b ENSDARG00000044246, ENSDARG00000110012 51 1 - - - - - 1.000 - - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
91. zglp1 ENSDARG00000067669 6 1 - - - - - - 1.000 - - zinc finger, GATA-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-359]
92. syngr2b_1 ENSDARG00000104470 24 1 - - - - - - 1.000 - - synaptogyrin 2b [Source:ZFIN;Acc:ZDB-GENE-070424-19]
93. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 1 1.000 - - - - - - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
94. si:ch211-165l15.1 si:ch211-165l15.1 10 1 - - - - - 1.000 - - -
95. slc30a2 ENSDARG00000021305 4 1 - - - - - 1.000 - - - solute carrier family 30 (zinc transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-347]
96. cdk5r2b ENSDARG00000078671 20 1 - - - - - 1.000 - - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
97. PEG3_20 PEG3_20 6 1 - - - - - - 1.000 - -
98. si:ch73-189n23.1 ENSDARG00000086247 15 1 1.000 - - - - - - - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
99. CABZ01046432.1 ENSDARG00000079325 11 1 1.000 - - - - - - - - uncharacterized LOC100331045 [Source:NCBI gene;Acc:100331045]
100. cyp39a1 ENSDARG00000017982 4 1 - - - - - 1.000 - - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]

There are 829 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA