Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-259i2.2

Gene Name Gene ID Reads Annotation
si:ch211-259i2.2 si:ch211-259i2.2 45










Genes with expression patterns similar to si:ch211-259i2.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-259i2.2 si:ch211-259i2.2 45 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. rab3da ENSDARG00000018107 28 2.208 - - 0.709 - - 0.703 - - 0.796 RAB3D, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-080722-14]
3. prodha ENSDARG00000086746 10 1.959 - 0.959 - - 1.000 - - - - proline dehydrogenase (oxidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041008-73]
4. polr2b ENSDARG00000098783 90 1.926 - 1.000 - - - - 0.926 - - polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
5. eif4enif1 ENSDARG00000016177 238 1.907 - 0.974 - - - - 0.933 - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:ZFIN;Acc:ZDB-GENE-050320-113]
6. 5S_rRNA_15 5S_rRNA_15 9 1.855 - 1.000 - - - - - 0.855 -
7. CT030012.1 ENSDARG00000105611 154 1.847 - 0.914 - - - - 0.933 - -
8. spsb3a ENSDARG00000077737 527 1.821 - - - - - - 0.964 0.857 - splA/ryanodine receptor domain and SOCS box containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-4182]
9. tmem110 497 1.81 - - - - - 0.886 0.924 - - transmembrane protein 110
10. CABZ01059627.1 ENSDARG00000078394 101 1.809 - - - - - 0.862 0.947 - -
11. lig4 ENSDARG00000060620 369 1.805 - 0.922 - - - - 0.883 - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
12. aldh9a1a.2 ENSDARG00000055331, ENSDARG00000117162 45 1.804 - - - - 0.897 0.907 - - - aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-081104-507]
13. ldhbb ENSDARG00000071076 31 1.803 1.000 0.803 - - - - - - - lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
14. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1.803 - 1.000 - - 0.803 - - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
15. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1.796 0.796 - - - 1.000 - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
16. CABZ01034707.1 CABZ01034707.1 122 1.796 0.796 1.000 - - - - - - -
17. si:dkey-40h20.1 ENSDARG00000095252 5 1.793 - 1.000 - - - - - - 0.793 si:dkey-40h20.1 [Source:ZFIN;Acc:ZDB-GENE-091113-44]
18. GPC5 GPC5 11 1.793 - 1.000 - - - 0.793 - - -
19. zp3b ENSDARG00000039828 15 1.774 - 1.000 - - - - - - 0.774 zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
20. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1.771 - - - - - - 0.949 0.822 - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
21. fastkd1 ENSDARG00000056128 141 1.766 - - - - - - 0.945 0.821 - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
22. tmprss13a ENSDARG00000100969 84 1.765 0.796 - - - - - 0.969 - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
23. si:ch211-210h11.7 si:ch211-210h11.7 32 1.76 - 0.921 - - - - - 0.839 -
24. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.758 0.796 - 0.962 - - - - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
25. si:rp71-3c13.3 si:rp71-3c13.3 128 1.758 0.795 - - - - - 0.963 - -
26. CR457441.2 CR457441.2 82 1.757 - 0.928 - - - 0.829 - - -
27. ulk4 ENSDARG00000004176 85 1.752 0.796 - - - - - 0.956 - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
28. CLNK 8 1.742 - - 0.947 - 0.795 - - - - cytokine dependent hematopoietic cell linker
29. si:ch211-235f12.2 ENSDARG00000092119 31 1.718 - 1.000 - - 0.718 - - - - si:ch211-235f12.2 [Source:ZFIN;Acc:ZDB-GENE-050419-113]
30. si:ch73-189n23.1 ENSDARG00000086247 15 1.717 0.796 0.921 - - - - - - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
31. ciz1b ENSDARG00000089461 57 1.717 0.796 0.921 - - - - - - - cdkn1a interacting zinc finger protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2933]
32. ATXN1 ATXN1 12 1.716 0.716 - 1.000 - - - - - -
33. brf2 ENSDARG00000002060 81 1.705 0.705 1.000 - - - - - - - BRF2, RNA polymerase III transcription initiation factor [Source:ZFIN;Acc:ZDB-GENE-040801-43]
34. RFESD_2 RFESD_2 29 1.702 - - - - 0.886 0.816 - - -
35. dennd2c ENSDARG00000073738 161 1.701 - 0.741 - - - - 0.960 - - DENN/MADD domain containing 2C [Source:ZFIN;Acc:ZDB-GENE-081105-71]
36. SHROOM2 SHROOM2 934 1.697 - 0.978 - - - 0.719 - - -
37. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 1.69 - - - - - 0.790 0.900 - - general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
38. tmem79b ENSDARG00000076861 154 1.675 0.957 - - - - 0.718 - - - transmembrane protein 79b [Source:ZFIN;Acc:ZDB-GENE-120807-1]
39. ctgfb ENSDARG00000104292 69 1.675 - - - - - - 0.971 0.704 - connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
40. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 1.674 - - - - - - 0.939 0.735 - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
41. faim2a ENSDARG00000038784 39 1.67 - - - - 0.881 0.789 - - - Fas apoptotic inhibitory molecule 2a [Source:ZFIN;Acc:ZDB-GENE-050320-88]
42. CABZ01044023.1 ENSDARG00000117734 240 1.664 - - - - - 0.727 0.937 - -
43. mxtx1 ENSDARG00000069382 32 1.664 - - 0.848 - - 0.816 - - - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
44. LGALS3BP LGALS3BP 51 1.663 - - - - - 0.921 0.742 - -
45. BCL2L12 BCL2L12 327 1.648 - - - - - 0.866 - 0.782 -
46. GP9 ENSDARG00000090638 53 1.647 - 0.852 - - 0.795 - - - - glycoprotein IX (platelet) [Source:ZFIN;Acc:ZDB-GENE-090313-5]
47. DHDH DHDH 15 1.646 0.830 - - - - 0.816 - - -
48. nek8 ENSDARG00000045626, ENSDARG00000117017 67 1.641 - 0.906 - - - 0.735 - - - NIMA-related kinase 8 [Source:ZFIN;Acc:ZDB-GENE-020509-1]
49. gadd45aa ENSDARG00000043581 114 1.64 0.796 - - - - - 0.844 - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
50. si:dkey-209n16.2 ENSDARG00000095914 27 1.638 - 0.858 - - - 0.780 - - - si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44]
51. NF1 NF1 62 1.622 - 0.847 - - - - - 0.775 -
52. necab1 ENSDARG00000056566, ENSDARG00000111028 26 1.619 - - - - 0.803 0.816 - - - N-terminal EF-hand calcium binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-395]
53. CABZ01024770.1 CABZ01024770.1 150 1.603 - - - - - 0.706 0.897 - -
54. b3gntl1 ENSDARG00000043431 50 1.597 0.796 0.801 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050913-133]
55. DUSP13_1 DUSP13_1 425 1.597 0.796 - 0.801 - - - - - -
56. si:ch211-260b17.6 32 1.596 0.796 - - - - 0.800 - - - si:ch211-260b17.6
57. wnt11 ENSDARG00000004256, ENSDARG00000115343 331 1.59 0.751 - - - - - - 0.839 - wingless-type MMTV integration site family, member 11 [Source:ZFIN;Acc:ZDB-GENE-990603-12]
58. zgc:194398 ENSDARG00000078250 815 1.589 - - - - - 0.703 0.886 - - zgc:194398 [Source:ZFIN;Acc:ZDB-GENE-081022-111]
59. si:ch211-113p18.3 ENSDARG00000087835 377 1.581 - - - - - 0.728 0.853 - - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
60. mir199-2 mir199-2 38 1.577 - - - - 0.862 0.715 - - -
61. sntb1 ENSDARG00000041729 163 1.553 0.796 - - - - 0.757 - - - syntrophin, basic 1 [Source:ZFIN;Acc:ZDB-GENE-040704-13]
62. fads2 ENSDARG00000019532 152 1.543 - 0.754 - - - 0.789 - - - fatty acid desaturase 2 [Source:ZFIN;Acc:ZDB-GENE-011212-1]
63. bty bty 752 1.537 - - - - - 0.790 0.747 - -
64. bnipl ENSDARG00000060435 1382 1.534 - - - - - 0.727 0.807 - - BCL2 interacting protein like [Source:ZFIN;Acc:ZDB-GENE-060503-81]
65. slc6a4a ENSDARG00000061165 206 1.525 - - - - - - 0.821 0.704 - solute carrier family 6 (neurotransmitter transporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-060314-1]
66. cldnd ENSDARG00000006580 17 1.522 - - 0.783 - - 0.739 - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
67. si:dkey-7a20.9 si:dkey-7a20.9 154 1.511 - - - - - 0.809 - 0.702 -
68. FAT2 ENSDARG00000018923 1088 1.51 - - - - - 0.788 0.722 - - FAT atypical cadherin 2 [Source:ZFIN;Acc:ZDB-GENE-111031-1]
69. GEMIN6 ENSDARG00000105394 130 1.503 - 0.767 - - - - - 0.736 - gem (nuclear organelle) associated protein 6 [Source:ZFIN;Acc:ZDB-GENE-090218-1]
70. kctd3 ENSDARG00000060854 82 1.491 - - - - - 0.780 - 0.711 - potassium channel tetramerization domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-169]
71. ccdc88b ENSDARG00000076189 123 1.486 - - 0.737 - - - - 0.749 - coiled-coil domain containing 88B [Source:ZFIN;Acc:ZDB-GENE-080303-31]
72. zc3h7b 2936 1.472 - - - - - 0.727 0.745 - - zinc finger CCCH-type containing 7B
73. STYK1 108 1.42 - - - - 0.719 0.701 - - - serine/threonine/tyrosine kinase 1
74. si:dkey-22i16.9 ENSDARG00000095949 16 1 - 1.000 - - - - - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
75. aasdh ENSDARG00000022730 13 1 - 1.000 - - - - - - - aminoadipate-semialdehyde dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-041210-322]
76. slc9a5 ENSDARG00000078560 76 1 - 1.000 - - - - - - - solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5 [Source:ZFIN;Acc:ZDB-GENE-080225-43]
77. si:dkeyp-53e4.1 ENSDARG00000094558 22 1 - 1.000 - - - - - - - si:dkeyp-53e4.1 [Source:ZFIN;Acc:ZDB-GENE-110913-59]
78. si:dkey-25c4.1 si:dkey-25c4.1 1 1 - - - - 1.000 - - - -
79. SPOP ENSDARG00000100519 52 1 - 1.000 - - - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
80. CR942805.3 CR942805.3 7 1 - - 1.000 - - - - - -
81. sstr3 ENSDARG00000014477 14 1 - 1.000 - - - - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
82. zgc:158654 19 1 - - - - 1.000 - - - - zgc:158654, transcript variant X1
83. si:ch211-10p21.1 si:ch211-10p21.1 6 1 - - - - 1.000 - - - -
84. CABZ01032454.1 CABZ01032454.1 7 1 1.000 - - - - - - - -
85. pcdh2g12 5 1 - 1.000 - - - - - - - protocadherin 2 gamma 12
86. npffl ENSDARG00000045016 34 1 - 1.000 - - - - - - - neuropeptide FF-amide peptide precursor like [Source:ZFIN;Acc:ZDB-GENE-030806-1]
87. ENSDARG00000096199 ENSDARG00000096199 15 1 - 1.000 - - - - - - -
88. trhra ENSDARG00000076546 3 1 - - 1.000 - - - - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
89. zgc:174919 zgc:174919 24 1 - 1.000 - - - - - - -
90. svopb ENSDARG00000014951 1 1 - 1.000 - - - - - - - SV2 related protein b [Source:ZFIN;Acc:ZDB-GENE-070705-359]
91. npy8br ENSDARG00000005780 15 1 - 1.000 - - - - - - - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
92. cmklr1 ENSDARG00000090890 37 1 1.000 - - - - - - - - chemokine-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-060526-126]
93. rtn4rl2a ENSDARG00000052012 5 1 - - - - 1.000 - - - - reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
94. ST3GAL1 ENSDARG00000079654 2 1 - - - - 1.000 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
95. il12bb ENSDARG00000054542 6 1 - - - - 1.000 - - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
96. dnaaf2 ENSDARG00000103132 24 1 - 1.000 - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
97. eno1b ENSDARG00000013750 63 1 1.000 - - - - - - - - enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
98. slc34a2a ENSDARG00000012903 0 1 - - - - 1.000 - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-000524-1]
99. MYO5B ENSDARG00000062003 2 1 - - - - 1.000 - - - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
100. CU633991.1 CU633991.1 16 1 1.000 - - - - - - - -

There are 1835 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA