Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch73-189n23.1

Gene Name Gene ID Reads Annotation
si:ch73-189n23.1 ENSDARG00000086247 15 si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]










Genes with expression patterns similar to si:ch73-189n23.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-189n23.1 ENSDARG00000086247 15 7 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
2. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 2.319 - 0.836 0.747 - - - 0.736 - - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
3. CR387932.1 ENSDARG00000097344 2 2 1.000 - - - - - 1.000 - -
4. ciz1b ENSDARG00000089461 57 2 1.000 1.000 - - - - - - - cdkn1a interacting zinc finger protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2933]
5. KRT18_1 KRT18_1 17 2 1.000 - - - - - - 1.000 -
6. cart1 ENSDARG00000070930 46 2 - 1.000 - - - - 1.000 - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
7. mlycd ENSDARG00000104732, ENSDARG00000117073 5 1.979 1.000 - - - - - 0.979 - - malonyl-CoA decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-120]
8. CABZ01034707.1 CABZ01034707.1 122 1.921 1.000 0.921 - - - - - - -
9. C1S ENSDARG00000100599 20 1.921 - 0.921 - - - - - 1.000 - complement component 1, s subcomponent [Source:ZFIN;Acc:ZDB-GENE-030131-1232]
10. si:ch211-95j8.3 ENSDARG00000092580 20 1.87 - 0.870 - - - - - 1.000 - si:ch211-95j8.3 [Source:ZFIN;Acc:ZDB-GENE-091204-307]
11. b3gntl1 ENSDARG00000043431 50 1.864 1.000 0.864 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050913-133]
12. mctp1b ENSDARG00000060871 20 1.854 - 0.921 - - - - 0.933 - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
13. ocstamp ENSDARG00000022139, ENSDARG00000114094 12 1.842 - - 0.952 - - - 0.890 - - osteoclast stimulatory transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-050327-65]
14. crebl2 ENSDARG00000104049 16 1.751 0.751 - 1.000 - - - - - - cAMP responsive element binding protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-456]
15. irx4a ENSDARG00000035648 71 1.747 - - 0.747 - - - 1.000 - - iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]
16. zp2.6 ENSDARG00000091409 5 1.746 - - - 0.965 - - - 0.781 - zona pellucida glycoprotein 2, tandem duplicate 6 [Source:ZFIN;Acc:ZDB-GENE-090306-2]
17. abcg1 ENSDARG00000063475 97 1.723 1.000 - - - - - 0.723 - - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
18. si:ch211-259i2.2 si:ch211-259i2.2 45 1.717 0.796 0.921 - - - - - - -
19. rdh14a ENSDARG00000039299 79 1.716 - 0.778 - - - - 0.938 - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
20. kcnt1 ENSDARG00000079484 45 1.715 - 0.921 - - - - 0.794 - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
21. FANCA ENSDARG00000098241 39 1.679 - 0.921 - - - - 0.758 - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
22. zgc:163083 ENSDARG00000099873, ENSDARG00000109356 12 1.668 - - - 0.763 - - 0.905 - - zgc:163083 [Source:ZFIN;Acc:ZDB-GENE-070424-53]
23. si:ch211-63o20.7 ENSDARG00000042000 93 1.648 - 0.715 - - - - 0.933 - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
24. nme2a ENSDARG00000043820 8 1.647 - - - 0.860 - - 0.787 - - NME/NM23 nucleoside diphosphate kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7656]
25. btr18 ENSDARG00000103618 39 1.641 - 0.835 - - - - 0.806 - - bloodthirsty-related gene family, member 18 [Source:ZFIN;Acc:ZDB-GENE-080213-2]
26. si:dkey-239i20.2 ENSDARG00000043518, ENSDARG00000111965 23 1.623 - - - 0.817 - - 0.806 - - si:dkey-239i20.2 [Source:ZFIN;Acc:ZDB-GENE-041001-98]
27. si:dkey-165i8.5 si:dkey-165i8.5 21 1.562 - - - 0.789 - - 0.773 - -
28. si:ch211-165d12.4 ENSDARG00000079353 330 1.548 0.732 - - - - - 0.816 - - si:ch211-165d12.4 [Source:ZFIN;Acc:ZDB-GENE-080303-7]
29. CDH12 CDH12 44 1.546 0.732 - - 0.814 - - - - -
30. CT573263.1 ENSDARG00000112940 108 1.531 - 0.727 - - - - 0.804 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:108184006]
31. ldhbb ENSDARG00000071076 31 1.528 0.796 0.732 - - - - - - - lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
32. RBM20 74 1.515 0.773 - - 0.742 - - - - - RNA binding motif protein 20, transcript variant X1
33. zgc:85910 zgc:85910 299 1.479 0.711 - - - - - 0.768 - -
34. gdf6a ENSDARG00000053479 121 1.472 - 0.764 - - - - 0.708 - - growth differentiation factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-373]
35. gnb1l ENSDARG00000036293 75 1.465 0.722 0.743 - - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 1-like [Source:ZFIN;Acc:ZDB-GENE-050320-77]
36. ada ENSDARG00000003113 228 1.444 0.713 - - 0.731 - - - - - adenosine deaminase [Source:ZFIN;Acc:ZDB-GENE-040718-393]
37. C1H9orf156 C1H9orf156 122 1.414 - 0.710 - 0.704 - - - - -
38. GRINA GRINA 12 1 - - - - - - 1.000 - -
39. zbtb25 ENSDARG00000042383 94 1 - 1.000 - - - - - - - zinc finger and BTB domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-041001-125]
40. rictora ENSDARG00000100867 20 1 1.000 - - - - - - - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
41. als2a ENSDARG00000075111 29 1 - - - - - - - 1.000 - amyotrophic lateral sclerosis 2a (juvenile) [Source:ZFIN;Acc:ZDB-GENE-070402-2]
42. cep41 ENSDARG00000038500, ENSDARG00000117114 4 1 1.000 - - - - - - - - centrosomal protein 41 [Source:ZFIN;Acc:ZDB-GENE-040704-35]
43. echdc1 68 1 1.000 - - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
44. ppp2r3a ENSDARG00000077722 7 1 - - - - - - 1.000 - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
45. gadd45aa ENSDARG00000043581 114 1 1.000 - - - - - - - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
46. TRIM8 TRIM8 5 1 - - - - - - 1.000 - -
47. SLC9A3R2_1 SLC9A3R2_1 28 1 1.000 - - - - - - - -
48. FAM177B 9 1 - - - - - - 1.000 - - family with sequence similarity 177 member B
49. si:dkey-261l7.2 ENSDARG00000094345 51 1 - - - - - - 1.000 - - si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
50. KCNK7 ENSDARG00000057331 5 1 1.000 - - - - - - - - potassium channel, subfamily K, member 7 [Source:ZFIN;Acc:ZDB-GENE-110304-2]
51. gsc ENSDARG00000059073, ENSDARG00000111184, ENSDARG00000115937 152 1 1.000 - - - - - - - - goosecoid [Source:ZFIN;Acc:ZDB-GENE-980528-2060]
52. phc2b ENSDARG00000013224 3 1 - - - - - - - 1.000 - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
53. VPS13B VPS13B 1 1 1.000 - - - - - - - -
54. prkab1a ENSDARG00000044183 264 1 1.000 - - - - - - - - protein kinase, AMP-activated, beta 1 non-catalytic subunit, a [Source:ZFIN;Acc:ZDB-GENE-040718-377]
55. lgi1b ENSDARG00000058421 12 1 1.000 - - - - - - - - leucine-rich, glioma inactivated 1b [Source:ZFIN;Acc:ZDB-GENE-060217-1]
56. CABZ01080550.1 ENSDARG00000100621 3 1 - - - - - - 1.000 - -
57. ptpn6_1 ENSDARG00000089043 22 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
58. mbd5 ENSDARG00000059581 1 1 - - - - - - - 1.000 - methyl-CpG binding domain protein 5 [Source:ZFIN;Acc:ZDB-GENE-070209-125]
59. IYD IYD 8 1 - - - - - - 1.000 - -
60. MSH4 ENSDARG00000075826 37 1 1.000 - - - - - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
61. CU633479.6 ENSDARG00000116146 4 1 1.000 - - - - - - - -
62. BX323836.1 BX323836.1 1 1 - - - - - - 1.000 - -
63. LRRC69 LRRC69 1 1 - - - - - - 1.000 - -
64. C25H19orf40 C25H19orf40 17 1 1.000 - - - - - - - -
65. PITPNM3 ENSDARG00000055255 3 1 - - - - - - - 1.000 - PITPNM family member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9216]
66. Metazoa_SRP_20 Metazoa_SRP_20 2 1 - - 1.000 - - - - - -
67. si:ch211-80h18.1 ENSDARG00000078522 1941 1 1.000 - - - - - - - - si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
68. gata4 ENSDARG00000098952 11 1 - - - - - - 1.000 - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
69. zgc:194275 ENSDARG00000074014 130 1 1.000 - - - - - - - - zgc:194275 [Source:ZFIN;Acc:ZDB-GENE-081022-92]
70. ZC3H12A ENSDARG00000005271 5 1 - - - - - - 1.000 - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
71. smad6b ENSDARG00000031763 12 1 - - - - - - 1.000 - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
72. aven ENSDARG00000002894 49 1 1.000 - - - - - - - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
73. si:ch211-233m11.3 si:ch211-233m11.3 1 1 - - - - - - 1.000 - -
74. slc6a18 ENSDARG00000068387 6 1 - - - - - - 1.000 - - solute carrier family 6 (neutral amino acid transporter), member 18 [Source:ZFIN;Acc:ZDB-GENE-080219-9]
75. carm1l ENSDARG00000091531 13 1 1.000 - - - - - - - - coactivator-associated arginine methyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-090312-219]
76. CR936371.2 ENSDARG00000117302 2 1 1.000 - - - - - - - -
77. si:dkeyp-3f10.17 ENSDARG00000087254 1 1 - - - - - - 1.000 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
78. slc6a2 ENSDARG00000016141 49 1 - - - - - - 1.000 - - solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
79. si:dkey-167k11.3 si:dkey-167k11.3 3 1 1.000 - - - - - - - -
80. zgc:152977 ENSDARG00000077178 59 1 - - - - - - 1.000 - - zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]
81. si:dkey-284g18.1 si:dkey-284g18.1 2 1 - - - - - - - 1.000 -
82. HMGXB3 ENSDARG00000077823 2 1 - - - - - - - 1.000 - HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
83. tmem187 ENSDARG00000051989 136 1 - 1.000 - - - - - - - transmembrane protein 187 [Source:ZFIN;Acc:ZDB-GENE-090313-366]
84. CYP27A1_2 CYP27A1_2 5 1 - - - - - - 1.000 - -
85. CABZ01023255.1 ENSDARG00000099984 13 1 - - 1.000 - - - - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:110438218]
86. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 1 1.000 - - - - - - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
87. cacna1hb ENSDARG00000099708 1 1 - - - - - - - 1.000 - calcium channel, voltage-dependent, T type, alpha 1H subunit b [Source:ZFIN;Acc:ZDB-GENE-090312-128]
88. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 1 - - - - - - 1.000 - - lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
89. satb2 ENSDARG00000061885 6 1 - - - - - - 1.000 - - SATB homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070912-212]
90. CR388163.4 CR388163.4 4 1 - - - - - - 1.000 - -
91. CABZ01046432.1 ENSDARG00000079325 11 1 1.000 - - - - - - - - uncharacterized LOC100331045 [Source:NCBI gene;Acc:100331045]
92. npffr1l3 ENSDARG00000010712 18 1 - - - - - - 1.000 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
93. CABZ01034857.1 CABZ01034857.1 1 1 - - - - - - 1.000 - -
94. tbx5b ENSDARG00000092060 37 1 - - - - - - 1.000 - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
95. g6pcb ENSDARG00000014967 8 1 - - - - - - 1.000 - - glucose-6-phosphatase b, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081223-2]
96. BX897671.1 BX897671.1 10 1 1.000 - - - - - - - -
97. zgc:153441 ENSDARG00000054797 9 1 1.000 - - - - - - - - zgc:153441 [Source:ZFIN;Acc:ZDB-GENE-060825-39]
98. tmprss13a ENSDARG00000100969 84 1 1.000 - - - - - - - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
99. sh2d3cb ENSDARG00000104555, ENSDARG00000116530 21 1 - - 1.000 - - - - - - SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052]
100. CU633857.1 ENSDARG00000115315 21 1 - - - - - - 1.000 - - multiciliate differentiation and DNA synthesis associated cell cycle protein [Source:NCBI gene;Acc:100537904]

There are 1001 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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